| Definition | Pseudomonas fluorescens Pf0-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007492 |
| Length | 6,438,405 |
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The map label for this gene is 77459679
Identifier: 77459679
GI number: 77459679
Start: 3942274
End: 3943074
Strand: Reverse
Name: 77459679
Synonym: Pfl01_3457
Alternate gene names: NA
Gene position: 3943074-3942274 (Counterclockwise)
Preceding gene: 77459680
Following gene: 77459671
Centisome position: 61.24
GC content: 65.42
Gene sequence:
>801_bases ATGTTGTTGGCTAGTCTGTTTGGCGTGGTGATGGGGTTGATCCTCGGTCTGACCGGGGCCGGCGGCGGGATTCTCGCCGT ACCGGCGCTGGTGCTCGGGCTGGGCTGGACGATGACGCAGGCGGCGCCGGTGGCGTTGTTTGCCGTTGGCAGCGCAGCGG CGGTCGGCGCGATCGATGGCTTGCGCCATGGTCTGGTGCGTTATCGCGCGGCGCTGCTGATCGCGGCGCTCGGCGCGGTG TTTTCACCGGTGGGCATCTACTTCGCCCATCAGTTGCCGGAAAAGGTCCTGATGATCCTGTTCAGCCTGCTGATGGTGAT GGTGGCGTGGCGCATGCTGCGCCGCGAACGCCAGCAAGAGGGCCCGAGCGACCATGGCCACGCCAGTTGGGGCCAGAAGA ACTGCATGCTCAATGAGCAGACCGGCCGTTTCGACTGGACCGCCAAATGCACCGCGACCCTCGCGGCACTGGGCGCGGTC ACCGGCGTGGTGTCCGGGTTGCTGGGGGTGGGCGGCGGGTTTCTGATCGTGCCGGCGTTCAAGCAACTGACCGATGTGCA GATGCGCGGCATCGTCGCCACTTCACTGATGGTCATCAGCCTGATTTCCGCCATCGGCGTGATCGGCGCGTTCCATGCCG GGGTGCGGATCGATCATCTTGGCGCGTCGTTCATCGTGGCCAGCATCGTCGGCATGATCATCGGCCGCAAACTCTGCGCG CGGGTGCCGGCGAGGACGTTGCAGGTGGGGTTTGCCAGTGTGTGCCTGGTGGTTGCGGCTTACATGTTGCTGCGGGCTTG A
Upstream 100 bases:
>100_bases GTGGCTGAAGGCGACGTTGCTGCCGTGGTTCTACTGGAACGGCATGCTCAAGGGCCGCGAATGGCTGACAAGTCTGTCCA GGGTCGACTGAGAACACACT
Downstream 100 bases:
>100_bases TATGAAGTCTGTGGCGAGGGAGCAGGCCCCCTCGCCACAGTGATCGCGTTACAACACCAGATGCGGCAACCAAAGCGACA GCGCCGGAACGTAGGTCACC
Product: hypothetical protein
Products: NA
Alternate protein names: Transmembrane Protein; Membrane Permease Protein
Number of amino acids: Translated: 266; Mature: 266
Protein sequence:
>266_residues MLLASLFGVVMGLILGLTGAGGGILAVPALVLGLGWTMTQAAPVALFAVGSAAAVGAIDGLRHGLVRYRAALLIAALGAV FSPVGIYFAHQLPEKVLMILFSLLMVMVAWRMLRRERQQEGPSDHGHASWGQKNCMLNEQTGRFDWTAKCTATLAALGAV TGVVSGLLGVGGGFLIVPAFKQLTDVQMRGIVATSLMVISLISAIGVIGAFHAGVRIDHLGASFIVASIVGMIIGRKLCA RVPARTLQVGFASVCLVVAAYMLLRA
Sequences:
>Translated_266_residues MLLASLFGVVMGLILGLTGAGGGILAVPALVLGLGWTMTQAAPVALFAVGSAAAVGAIDGLRHGLVRYRAALLIAALGAV FSPVGIYFAHQLPEKVLMILFSLLMVMVAWRMLRRERQQEGPSDHGHASWGQKNCMLNEQTGRFDWTAKCTATLAALGAV TGVVSGLLGVGGGFLIVPAFKQLTDVQMRGIVATSLMVISLISAIGVIGAFHAGVRIDHLGASFIVASIVGMIIGRKLCA RVPARTLQVGFASVCLVVAAYMLLRA >Mature_266_residues MLLASLFGVVMGLILGLTGAGGGILAVPALVLGLGWTMTQAAPVALFAVGSAAAVGAIDGLRHGLVRYRAALLIAALGAV FSPVGIYFAHQLPEKVLMILFSLLMVMVAWRMLRRERQQEGPSDHGHASWGQKNCMLNEQTGRFDWTAKCTATLAALGAV TGVVSGLLGVGGGFLIVPAFKQLTDVQMRGIVATSLMVISLISAIGVIGAFHAGVRIDHLGASFIVASIVGMIIGRKLCA RVPARTLQVGFASVCLVVAAYMLLRA
Specific function: Unknown
COG id: COG0730
COG function: function code R; Predicted permeases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 27632; Mature: 27632
Theoretical pI: Translated: 10.75; Mature: 10.75
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 4.5 %Met (Translated Protein) 6.0 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 4.5 %Met (Mature Protein) 6.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLLASLFGVVMGLILGLTGAGGGILAVPALVLGLGWTMTQAAPVALFAVGSAAAVGAIDG CHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHCCHHHHHHHHH LRHGLVRYRAALLIAALGAVFSPVGIYFAHQLPEKVLMILFSLLMVMVAWRMLRRERQQE HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC GPSDHGHASWGQKNCMLNEQTGRFDWTAKCTATLAALGAVTGVVSGLLGVGGGFLIVPAF CCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEHHHH KQLTDVQMRGIVATSLMVISLISAIGVIGAFHAGVRIDHLGASFIVASIVGMIIGRKLCA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHH RVPARTLQVGFASVCLVVAAYMLLRA HCCHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MLLASLFGVVMGLILGLTGAGGGILAVPALVLGLGWTMTQAAPVALFAVGSAAAVGAIDG CHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHCCHHHHHHHHH LRHGLVRYRAALLIAALGAVFSPVGIYFAHQLPEKVLMILFSLLMVMVAWRMLRRERQQE HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC GPSDHGHASWGQKNCMLNEQTGRFDWTAKCTATLAALGAVTGVVSGLLGVGGGFLIVPAF CCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEHHHH KQLTDVQMRGIVATSLMVISLISAIGVIGAFHAGVRIDHLGASFIVASIVGMIIGRKLCA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHH RVPARTLQVGFASVCLVVAAYMLLRA HCCHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA