Click here to switch to the map view.

The map label for this gene is rutB [H]

Identifier: 77459494

GI number: 77459494

Start: 3754161

End: 3754799

Strand: Direct

Name: rutB [H]

Synonym: Pfl01_3272

Alternate gene names: 77459494

Gene position: 3754161-3754799 (Clockwise)

Preceding gene: 77459492

Following gene: 77459495

Centisome position: 58.31

GC content: 59.15

Gene sequence:

>639_bases
ATGTCGAAACCTCTTTATCCGCTCGACAGAACCGCCTACCTGCTGGTCGATCCGTACAACGATTTTCTCTCCGACGGCGG
CAAGATCTTTCCGCTGCTCAAACCGATGGCCGAGCAGAACGGCTTGCTCGACAACCTGCGCAAACTCGACCGCGCCGTGC
GGGCCCTGCCGATTCCGGTCGTCATCGTACCGCATCACCGCTGGGTAAAAGGTGACTACGAGAACTGGGATCACCCCACC
CCGACCCAACAAAAGATCATGCACATGCACCACTTCGCGCGCGGCGAATGGGGCGGTGAATGGCACCCGGATTTCGCGCC
GAAGGACGGCGACATTGTGGTTCAGGAACACTGGGGCTCCAGCGGTTTCGCCAACACCGACCTGGACTTTCGCCTGAAAC
AGCAAGGCATCACCCACGTGATCATTGTCGGCCTGCTGGCCAACACCTGCATCGAAGCCACCGCCCGCTACGCGTCGGAA
CTCGGTTACCACGTCACTCTGGTACGGGATGCGACCGCCGCGTTCAAAGAGGAAATGATGCACGCCGCCCATGAACTCAA
CGGTCCGACGTTCGCCCATGTCATCACCACTACAGACGAACTGATCGCCAACCTTCAGTCGCAAGGTGACGCAAAATGA

Upstream 100 bases:

>100_bases
TCAGGGCTTGCCTCTTACACAGTTACTATGATTATCATATCAACACGATGCGGGAACAAGCCCTGAGCATCGATCACTCT
CATTGCCGGAGTACATCGTC

Downstream 100 bases:

>100_bases
CTCTGACCGGCCACCTGCTGATTGGCGCCGCTGACGTCCCCGCTACCGAGGGCACGATGAAGGCGCTGAACCCGGCAACC
AACCAATTGCTCGAACCGGA

Product: isochorismatase hydrolase

Products: NA

Alternate protein names: Ureidoacrylate amidohydrolase [H]

Number of amino acids: Translated: 212; Mature: 211

Protein sequence:

>212_residues
MSKPLYPLDRTAYLLVDPYNDFLSDGGKIFPLLKPMAEQNGLLDNLRKLDRAVRALPIPVVIVPHHRWVKGDYENWDHPT
PTQQKIMHMHHFARGEWGGEWHPDFAPKDGDIVVQEHWGSSGFANTDLDFRLKQQGITHVIIVGLLANTCIEATARYASE
LGYHVTLVRDATAAFKEEMMHAAHELNGPTFAHVITTTDELIANLQSQGDAK

Sequences:

>Translated_212_residues
MSKPLYPLDRTAYLLVDPYNDFLSDGGKIFPLLKPMAEQNGLLDNLRKLDRAVRALPIPVVIVPHHRWVKGDYENWDHPT
PTQQKIMHMHHFARGEWGGEWHPDFAPKDGDIVVQEHWGSSGFANTDLDFRLKQQGITHVIIVGLLANTCIEATARYASE
LGYHVTLVRDATAAFKEEMMHAAHELNGPTFAHVITTTDELIANLQSQGDAK
>Mature_211_residues
SKPLYPLDRTAYLLVDPYNDFLSDGGKIFPLLKPMAEQNGLLDNLRKLDRAVRALPIPVVIVPHHRWVKGDYENWDHPTP
TQQKIMHMHHFARGEWGGEWHPDFAPKDGDIVVQEHWGSSGFANTDLDFRLKQQGITHVIIVGLLANTCIEATARYASEL
GYHVTLVRDATAAFKEEMMHAAHELNGPTFAHVITTTDELIANLQSQGDAK

Specific function: In vivo, quickly hydrolyzes the ureidoacrylate peracid to avoid toxicity, but can also hydrolyzes ureidoacrylate that is formed spontaneously from ureidoacrylate peracid. One of the products of hydrolysis, carbamate, hydrolyzes spontaneously, thereby rele

COG id: COG1335

COG function: function code Q; Amidases related to nicotinamidase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the isochorismatase family. RutB subfamily [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR019916
- InterPro:   IPR000868 [H]

Pfam domain/function: PF00857 Isochorismatase [H]

EC number: NA

Molecular weight: Translated: 23881; Mature: 23750

Theoretical pI: Translated: 6.31; Mature: 6.31

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSKPLYPLDRTAYLLVDPYNDFLSDGGKIFPLLKPMAEQNGLLDNLRKLDRAVRALPIPV
CCCCCCCCCCEEEEEEECCHHHHHCCCEEEHHHHHHHHCCCHHHHHHHHHHHHHHCCCCE
VIVPHHRWVKGDYENWDHPTPTQQKIMHMHHFARGEWGGEWHPDFAPKDGDIVVQEHWGS
EEECCCCEECCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEEECCCC
SGFANTDLDFRLKQQGITHVIIVGLLANTCIEATARYASELGYHVTLVRDATAAFKEEMM
CCCCCCCCCEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEHHHHHHHHHHHH
HAAHELNGPTFAHVITTTDELIANLQSQGDAK
HHHHHCCCCEEEEEEECHHHHHHHHHHCCCCC
>Mature Secondary Structure 
SKPLYPLDRTAYLLVDPYNDFLSDGGKIFPLLKPMAEQNGLLDNLRKLDRAVRALPIPV
CCCCCCCCCEEEEEEECCHHHHHCCCEEEHHHHHHHHCCCHHHHHHHHHHHHHHCCCCE
VIVPHHRWVKGDYENWDHPTPTQQKIMHMHHFARGEWGGEWHPDFAPKDGDIVVQEHWGS
EEECCCCEECCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEEECCCC
SGFANTDLDFRLKQQGITHVIIVGLLANTCIEATARYASELGYHVTLVRDATAAFKEEMM
CCCCCCCCCEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEHHHHHHHHHHHH
HAAHELNGPTFAHVITTTDELIANLQSQGDAK
HHHHHCCCCEEEEEEECHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA