| Definition | Pseudomonas fluorescens Pf0-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007492 |
| Length | 6,438,405 |
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The map label for this gene is aldH [H]
Identifier: 77459495
GI number: 77459495
Start: 3754796
End: 3756361
Strand: Direct
Name: aldH [H]
Synonym: Pfl01_3273
Alternate gene names: 77459495
Gene position: 3754796-3756361 (Clockwise)
Preceding gene: 77459494
Following gene: 77459498
Centisome position: 58.32
GC content: 64.05
Gene sequence:
>1566_bases ATGACTCTGACCGGCCACCTGCTGATTGGCGCCGCTGACGTCCCCGCTACCGAGGGCACGATGAAGGCGCTGAACCCGGC AACCAACCAATTGCTCGAACCGGAATTCGCCCTCGGCGGTGCGTCGCAGATCGATCAGGCGGCAACCCTCGCTGATGCGG CCTTCGACAGCTACAGCCACACCTCGCTGGCCGAGCGTGCGGCGTTTCTGGAAAGCATCGCCGACAACCTCGACGCCGTC CGTGAGGAGCTGGCCGCCCGCGCCGCACTGGAAACCGGCCTGCCCCAGGCACAACTGGAGGGCGAAGCCGCCAAGGCCGC CACCCAGTTCCGCCAGTTCGCCGACGTGGTGCGCAAGGGTCGCTTCCTGCAATTGGCGATCGACCCGGCGCAACCCGATC GCCAGCCGCGGCCACGGATGGATCATCGCCTGCAAAAAGTCGCCATCGGCCCGGTGGCGATCTTCGGAGCAAGCAATTTT CCGATCTCCTATTCAGTGGCCGGCGGTGACACCGCGTCGGCACTCGCGGCCGGTGCAACGGTGATTCTCAAGGCGCATAA CGCGCATCCCGGTGCCTCGGAAATCCAGGCGCGCGCCATCCGTAAAGCGGTGCAAATGCACGGTCTGCACGAAGGGGTTT TCTCCATGGTGCGCGGTGGTGGCAATGCCATCGGTGAGGCGCTGGTCGATCATCCTTTGATTAAAGCGGTGACGTTCACC GGTTCAGAGGTGGGCGGCATGGCGCTTTATCGTCGCGCGCAATTACGGCCTGATCCGATCCCGGTGTTCACCGAAATGAC CAGCGTCAACCCGACGTTCATTCTGCCCGCAGCGCTGTCCGCGCGTGGCGGTGAAATCGGCGATGGCTTTGTCGAGCGGA TGCTGGTGAATGTCGGGCAGGCCTGTCTGTGTCCGTCGATCCTGATCGCGGTCGAGGGCGAAGGTCTGCAAGCGTTGCGC AGCGCCATGATCAAGCGGGTCAGTGCAGCGTCGGCGCGTACGATGCTGACGCCGGGGATTCACGGTTCATACGTCAAAGG GCTGGTGGCAATGGAAAGCGTGGGGGCCAATCTGGTGGCGGTCGGCGCGCCGGCGGATGGTCAGTTTGAGGGACGCTCGG CGTTGTTGGAAGTTGACGGCCAAGGCCTGCTCAGCGAACCGGCGCTGGCCCATGAAGTGTTCGGTCCGGCGGCGCTGTTG GTAACGGTCAGGGATGATGAAGAGTTGCTGGCGGTCGCCCGTTCGTTCAAGGGTCAACTGAGCGCAGCCATTCACCTTGA AGACCGCGATCTGGATCTGGCCCGGCGTCTGCTACCGATCCTCGAGCGCCGCACCGGACGCATCGTGGTCAACGCTTTCG CCCATCCGCAGGAAGTGACCTTCGCCACCGTACACGGCGGGCCGTTCCCGGCCACCTCGGACAGCCGTTTCACCTCGGTC GGCATGACCTCGATCGAGCGCTTTTTGCGGCCGGTGGCGTATCAGGGCTTTCCCGATGCATTACTGCCGGAGGTGTTGCG CGACGCCAATCCACTCGATCTGCCCCGCAGCATCGACGGCCAATAA
Upstream 100 bases:
>100_bases TGATGCACGCCGCCCATGAACTCAACGGTCCGACGTTCGCCCATGTCATCACCACTACAGACGAACTGATCGCCAACCTT CAGTCGCAAGGTGACGCAAA
Downstream 100 bases:
>100_bases AAAATGCCCGGTTCGGCGGATCACCGAATCGGGCATGCTTGTTCAATCAAATAAGCAGGTCCTCATAGAAAGCGCCGTAC GGAAGCTCGGGGTGTTCGAT
Product: aldehyde dehydrogenase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 521; Mature: 520
Protein sequence:
>521_residues MTLTGHLLIGAADVPATEGTMKALNPATNQLLEPEFALGGASQIDQAATLADAAFDSYSHTSLAERAAFLESIADNLDAV REELAARAALETGLPQAQLEGEAAKAATQFRQFADVVRKGRFLQLAIDPAQPDRQPRPRMDHRLQKVAIGPVAIFGASNF PISYSVAGGDTASALAAGATVILKAHNAHPGASEIQARAIRKAVQMHGLHEGVFSMVRGGGNAIGEALVDHPLIKAVTFT GSEVGGMALYRRAQLRPDPIPVFTEMTSVNPTFILPAALSARGGEIGDGFVERMLVNVGQACLCPSILIAVEGEGLQALR SAMIKRVSAASARTMLTPGIHGSYVKGLVAMESVGANLVAVGAPADGQFEGRSALLEVDGQGLLSEPALAHEVFGPAALL VTVRDDEELLAVARSFKGQLSAAIHLEDRDLDLARRLLPILERRTGRIVVNAFAHPQEVTFATVHGGPFPATSDSRFTSV GMTSIERFLRPVAYQGFPDALLPEVLRDANPLDLPRSIDGQ
Sequences:
>Translated_521_residues MTLTGHLLIGAADVPATEGTMKALNPATNQLLEPEFALGGASQIDQAATLADAAFDSYSHTSLAERAAFLESIADNLDAV REELAARAALETGLPQAQLEGEAAKAATQFRQFADVVRKGRFLQLAIDPAQPDRQPRPRMDHRLQKVAIGPVAIFGASNF PISYSVAGGDTASALAAGATVILKAHNAHPGASEIQARAIRKAVQMHGLHEGVFSMVRGGGNAIGEALVDHPLIKAVTFT GSEVGGMALYRRAQLRPDPIPVFTEMTSVNPTFILPAALSARGGEIGDGFVERMLVNVGQACLCPSILIAVEGEGLQALR SAMIKRVSAASARTMLTPGIHGSYVKGLVAMESVGANLVAVGAPADGQFEGRSALLEVDGQGLLSEPALAHEVFGPAALL VTVRDDEELLAVARSFKGQLSAAIHLEDRDLDLARRLLPILERRTGRIVVNAFAHPQEVTFATVHGGPFPATSDSRFTSV GMTSIERFLRPVAYQGFPDALLPEVLRDANPLDLPRSIDGQ >Mature_520_residues TLTGHLLIGAADVPATEGTMKALNPATNQLLEPEFALGGASQIDQAATLADAAFDSYSHTSLAERAAFLESIADNLDAVR EELAARAALETGLPQAQLEGEAAKAATQFRQFADVVRKGRFLQLAIDPAQPDRQPRPRMDHRLQKVAIGPVAIFGASNFP ISYSVAGGDTASALAAGATVILKAHNAHPGASEIQARAIRKAVQMHGLHEGVFSMVRGGGNAIGEALVDHPLIKAVTFTG SEVGGMALYRRAQLRPDPIPVFTEMTSVNPTFILPAALSARGGEIGDGFVERMLVNVGQACLCPSILIAVEGEGLQALRS AMIKRVSAASARTMLTPGIHGSYVKGLVAMESVGANLVAVGAPADGQFEGRSALLEVDGQGLLSEPALAHEVFGPAALLV TVRDDEELLAVARSFKGQLSAAIHLEDRDLDLARRLLPILERRTGRIVVNAFAHPQEVTFATVHGGPFPATSDSRFTSVG MTSIERFLRPVAYQGFPDALLPEVLRDANPLDLPRSIDGQ
Specific function: Catalyzes the oxidation of long-chain aliphatic aldehydes to acids. May be implicated in controlling luminescence as it catalyzes the oxidation of the fatty aldehyde substrate for the light-emitting reaction [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the aldehyde dehydrogenase family [H]
Homologues:
Organism=Homo sapiens, GI12007648, Length=441, Percent_Identity=24.4897959183673, Blast_Score=74, Evalue=2e-13, Organism=Homo sapiens, GI21614513, Length=510, Percent_Identity=23.3333333333333, Blast_Score=70, Evalue=5e-12, Organism=Escherichia coli, GI87082295, Length=479, Percent_Identity=27.5574112734864, Blast_Score=94, Evalue=2e-20, Organism=Escherichia coli, GI1788042, Length=309, Percent_Identity=30.7443365695793, Blast_Score=88, Evalue=1e-18, Organism=Escherichia coli, GI1787558, Length=481, Percent_Identity=27.4428274428274, Blast_Score=82, Evalue=6e-17, Organism=Escherichia coli, GI1789015, Length=421, Percent_Identity=25.6532066508314, Blast_Score=81, Evalue=2e-16, Organism=Escherichia coli, GI87081896, Length=459, Percent_Identity=25.4901960784314, Blast_Score=77, Evalue=3e-15, Organism=Escherichia coli, GI1786504, Length=243, Percent_Identity=30.4526748971193, Blast_Score=64, Evalue=2e-11, Organism=Caenorhabditis elegans, GI17551164, Length=458, Percent_Identity=23.3624454148472, Blast_Score=94, Evalue=2e-19, Organism=Caenorhabditis elegans, GI133930964, Length=443, Percent_Identity=23.7020316027088, Blast_Score=72, Evalue=5e-13, Organism=Saccharomyces cerevisiae, GI6323822, Length=255, Percent_Identity=30.9803921568627, Blast_Score=80, Evalue=8e-16, Organism=Saccharomyces cerevisiae, GI6324950, Length=471, Percent_Identity=21.8683651804671, Blast_Score=75, Evalue=3e-14, Organism=Saccharomyces cerevisiae, GI6319478, Length=255, Percent_Identity=26.2745098039216, Blast_Score=75, Evalue=3e-14, Organism=Drosophila melanogaster, GI281362580, Length=445, Percent_Identity=24.7191011235955, Blast_Score=68, Evalue=2e-11, Organism=Drosophila melanogaster, GI62472918, Length=445, Percent_Identity=24.7191011235955, Blast_Score=68, Evalue=2e-11, Organism=Drosophila melanogaster, GI62472926, Length=445, Percent_Identity=24.7191011235955, Blast_Score=68, Evalue=2e-11, Organism=Drosophila melanogaster, GI62472936, Length=445, Percent_Identity=24.7191011235955, Blast_Score=68, Evalue=2e-11, Organism=Drosophila melanogaster, GI21356737, Length=445, Percent_Identity=24.7191011235955, Blast_Score=68, Evalue=2e-11, Organism=Drosophila melanogaster, GI24585660, Length=229, Percent_Identity=25.3275109170306, Blast_Score=67, Evalue=2e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR016161 - InterPro: IPR016163 - InterPro: IPR016162 - InterPro: IPR015590 [H]
Pfam domain/function: PF00171 Aldedh [H]
EC number: =1.2.1.4 [H]
Molecular weight: Translated: 54888; Mature: 54757
Theoretical pI: Translated: 5.76; Mature: 5.76
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTLTGHLLIGAADVPATEGTMKALNPATNQLLEPEFALGGASQIDQAATLADAAFDSYSH CCEECEEEEEECCCCCCCCHHHHCCHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHCCCCH TSLAERAAFLESIADNLDAVREELAARAALETGLPQAQLEGEAAKAATQFRQFADVVRKG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCHHHHHHHHHHHHHHHHHCC RFLQLAIDPAQPDRQPRPRMDHRLQKVAIGPVAIFGASNFPISYSVAGGDTASALAAGAT CEEEEEECCCCCCCCCCCHHHHHHHHHHCCCEEEEECCCCCEEEEECCCCHHHHHHCCCE VILKAHNAHPGASEIQARAIRKAVQMHGLHEGVFSMVRGGGNAIGEALVDHPLIKAVTFT EEEEECCCCCCHHHHHHHHHHHHHHHHCHHHHHHHHHHCCCHHHHHHHHCCHHHEEEEEC GSEVGGMALYRRAQLRPDPIPVFTEMTSVNPTFILPAALSARGGEIGDGFVERMLVNVGQ CCCCCHHHHHHHHCCCCCCCCCEEHHCCCCCCEEEECHHCCCCCCCCHHHHHHHHHHCCC ACLCPSILIAVEGEGLQALRSAMIKRVSAASARTMLTPGIHGSYVKGLVAMESVGANLVA HHHCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHEECCCCCHHHHHHHHHHHHCCCCEEE VGAPADGQFEGRSALLEVDGQGLLSEPALAHEVFGPAALLVTVRDDEELLAVARSFKGQL EECCCCCCCCCCEEEEEECCCCCCCCCHHHHHHCCCEEEEEEECCCHHHHHHHHHHCCCC SAAIHLEDRDLDLARRLLPILERRTGRIVVNAFAHPQEVTFATVHGGPFPATSDSRFTSV EEEEEECCCCHHHHHHHHHHHHCCCCEEEEEECCCCCCEEEEEECCCCCCCCCCCCCHHH GMTSIERFLRPVAYQGFPDALLPEVLRDANPLDLPRSIDGQ HHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCCCCCCCCC >Mature Secondary Structure TLTGHLLIGAADVPATEGTMKALNPATNQLLEPEFALGGASQIDQAATLADAAFDSYSH CEECEEEEEECCCCCCCCHHHHCCHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHCCCCH TSLAERAAFLESIADNLDAVREELAARAALETGLPQAQLEGEAAKAATQFRQFADVVRKG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCHHHHHHHHHHHHHHHHHCC RFLQLAIDPAQPDRQPRPRMDHRLQKVAIGPVAIFGASNFPISYSVAGGDTASALAAGAT CEEEEEECCCCCCCCCCCHHHHHHHHHHCCCEEEEECCCCCEEEEECCCCHHHHHHCCCE VILKAHNAHPGASEIQARAIRKAVQMHGLHEGVFSMVRGGGNAIGEALVDHPLIKAVTFT EEEEECCCCCCHHHHHHHHHHHHHHHHCHHHHHHHHHHCCCHHHHHHHHCCHHHEEEEEC GSEVGGMALYRRAQLRPDPIPVFTEMTSVNPTFILPAALSARGGEIGDGFVERMLVNVGQ CCCCCHHHHHHHHCCCCCCCCCEEHHCCCCCCEEEECHHCCCCCCCCHHHHHHHHHHCCC ACLCPSILIAVEGEGLQALRSAMIKRVSAASARTMLTPGIHGSYVKGLVAMESVGANLVA HHHCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHEECCCCCHHHHHHHHHHHHCCCCEEE VGAPADGQFEGRSALLEVDGQGLLSEPALAHEVFGPAALLVTVRDDEELLAVARSFKGQL EECCCCCCCCCCEEEEEECCCCCCCCCHHHHHHCCCEEEEEEECCCHHHHHHHHHHCCCC SAAIHLEDRDLDLARRLLPILERRTGRIVVNAFAHPQEVTFATVHGGPFPATSDSRFTSV EEEEEECCCCHHHHHHHHHHHHCCCCEEEEEECCCCCCEEEEEECCCCCCCCCCCCCHHH GMTSIERFLRPVAYQGFPDALLPEVLRDANPLDLPRSIDGQ HHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8527447; 10903148 [H]