| Definition | Pseudomonas fluorescens Pf0-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007492 |
| Length | 6,438,405 |
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The map label for this gene is 77459447
Identifier: 77459447
GI number: 77459447
Start: 3705313
End: 3706305
Strand: Reverse
Name: 77459447
Synonym: Pfl01_3225
Alternate gene names: NA
Gene position: 3706305-3705313 (Counterclockwise)
Preceding gene: 77459448
Following gene: 77459446
Centisome position: 57.57
GC content: 64.45
Gene sequence:
>993_bases ATGCATCTGGTTCAATTCGAATTGAGTAGCGGCGAGCGCCGTGTCGGGGTGGTCGAGGGCGGTCTGGTGCGTGAAGTGCA GGATGCGCGCACAGTCCGCGATCTTGCTTTGGCCGCGATCGAGGCCGGCAGCACCCTCGCGCAGCAAGTGCAAACCCTGG GTCTGGGCATCAGCCACGATTACGCCGAATTGCTCGCCAAACTGCGGATCCTGCCGCCGCTGGATCACCCGGATCCGGCG CACCTGCTGGTCAGCGGCACCGGCCTCACGCACCTCGGCAGCGCGTCGGCCCGGGACAAGATGCATCAGCAGGCTGGCGA CGAAGCGGCGATGACCGACACCATGCGCATCTTCAAGTGGGGCGTGGAGGGCGGAAAACCGGTAGCGGGGCAGGCGGGCG TGCAGCCGGAATGGTTCTACAAGGGCGACGGCAGCATCGTTGTGCGTCCCGGTCAGCCGTTCCCGCTGCCGCCGTTTGCC GAAGACGCCGGCGAGGAGCCGGAGATGGCCGGCCTCTACATCATCGGCCACGATGGCAAGCCGTATCGCCTGGGGTTTGC GGTGGGCAACGAGTTCTCCGATCACGTCATGGAGCGCAAGAATTACCTGTACCTGGCCCACTCGAAACTGCGCAGTTGCA GCTACGGCCCGGAACTTCGCACGGGTGAATTGCCTCAACACCTGGCGGGCACCAGCCGCATCCTGCGCGACGGCGAAGTG CTGTGGCAGAACGAGTTCCTCAGCGGCGAGGCCAACATGTGCCACAGCCTGGCGAACCTCGAATACCACCACTTCAAGTA CCGCCAGTTCCTGCGTCCGGGCGATGTGCACATTCACTTCTTCGGCACCGCGACCCTGTCGTTCGCCGATGGCATCCGCA CTCAACCGGGCGACGTGTTCGAAATCAGCCAGGCTGAATTCGGCGCACCGCTGGTCAACGGCATCGCCCCGGTCGCAGCG GCATTCGAACCGGACAGCATCGGCACCCTTTAA
Upstream 100 bases:
>100_bases AGCGCAAGCATGTGCTGCCAGTCGAGCAATTTGCAGCGAGCGCGCGCGGCGCGACGCGCACCTGATTTCGATCCGGGATT TGTTTTAACAGGAGAACATC
Downstream 100 bases:
>100_bases GGAGATCTCATGACTCAGATTCTCGGTCACAACTACATCGGCGGTCGTCGCAGCGCGGCGGGCAACGTCAAGCTGCAAAG CGTCGACGCCACTACGGGCG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 330; Mature: 330
Protein sequence:
>330_residues MHLVQFELSSGERRVGVVEGGLVREVQDARTVRDLALAAIEAGSTLAQQVQTLGLGISHDYAELLAKLRILPPLDHPDPA HLLVSGTGLTHLGSASARDKMHQQAGDEAAMTDTMRIFKWGVEGGKPVAGQAGVQPEWFYKGDGSIVVRPGQPFPLPPFA EDAGEEPEMAGLYIIGHDGKPYRLGFAVGNEFSDHVMERKNYLYLAHSKLRSCSYGPELRTGELPQHLAGTSRILRDGEV LWQNEFLSGEANMCHSLANLEYHHFKYRQFLRPGDVHIHFFGTATLSFADGIRTQPGDVFEISQAEFGAPLVNGIAPVAA AFEPDSIGTL
Sequences:
>Translated_330_residues MHLVQFELSSGERRVGVVEGGLVREVQDARTVRDLALAAIEAGSTLAQQVQTLGLGISHDYAELLAKLRILPPLDHPDPA HLLVSGTGLTHLGSASARDKMHQQAGDEAAMTDTMRIFKWGVEGGKPVAGQAGVQPEWFYKGDGSIVVRPGQPFPLPPFA EDAGEEPEMAGLYIIGHDGKPYRLGFAVGNEFSDHVMERKNYLYLAHSKLRSCSYGPELRTGELPQHLAGTSRILRDGEV LWQNEFLSGEANMCHSLANLEYHHFKYRQFLRPGDVHIHFFGTATLSFADGIRTQPGDVFEISQAEFGAPLVNGIAPVAA AFEPDSIGTL >Mature_330_residues MHLVQFELSSGERRVGVVEGGLVREVQDARTVRDLALAAIEAGSTLAQQVQTLGLGISHDYAELLAKLRILPPLDHPDPA HLLVSGTGLTHLGSASARDKMHQQAGDEAAMTDTMRIFKWGVEGGKPVAGQAGVQPEWFYKGDGSIVVRPGQPFPLPPFA EDAGEEPEMAGLYIIGHDGKPYRLGFAVGNEFSDHVMERKNYLYLAHSKLRSCSYGPELRTGELPQHLAGTSRILRDGEV LWQNEFLSGEANMCHSLANLEYHHFKYRQFLRPGDVHIHFFGTATLSFADGIRTQPGDVFEISQAEFGAPLVNGIAPVAA AFEPDSIGTL
Specific function: Unknown
COG id: COG3802
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 35932; Mature: 35932
Theoretical pI: Translated: 5.67; Mature: 5.67
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MHLVQFELSSGERRVGVVEGGLVREVQDARTVRDLALAAIEAGSTLAQQVQTLGLGISHD CEEEEEEECCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCHH YAELLAKLRILPPLDHPDPAHLLVSGTGLTHLGSASARDKMHQQAGDEAAMTDTMRIFKW HHHHHHHHHCCCCCCCCCCCEEEEECCCCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHEE GVEGGKPVAGQAGVQPEWFYKGDGSIVVRPGQPFPLPPFAEDAGEEPEMAGLYIIGHDGK CCCCCCCCCCCCCCCCCEEEECCCEEEEECCCCCCCCCCHHHCCCCCCCEEEEEEECCCC PYRLGFAVGNEFSDHVMERKNYLYLAHSKLRSCSYGPELRTGELPQHLAGTSRILRDGEV CEEEEEEECCCHHHHHHHHCCEEEEEEHHHHCCCCCCCCCCCCCCHHHHHHHHHHHCCCE LWQNEFLSGEANMCHSLANLEYHHFKYRQFLRPGDVHIHFFGTATLSFADGIRTQPGDVF EEECCCCCCCHHHHHHHHCCCHHHHHHHHHCCCCCEEEEEEEEEEEEHHCCCCCCCCCEE EISQAEFGAPLVNGIAPVAAAFEPDSIGTL EECCHHCCCHHHHHHHHHHHCCCCCCCCCC >Mature Secondary Structure MHLVQFELSSGERRVGVVEGGLVREVQDARTVRDLALAAIEAGSTLAQQVQTLGLGISHD CEEEEEEECCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCHH YAELLAKLRILPPLDHPDPAHLLVSGTGLTHLGSASARDKMHQQAGDEAAMTDTMRIFKW HHHHHHHHHCCCCCCCCCCCEEEEECCCCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHEE GVEGGKPVAGQAGVQPEWFYKGDGSIVVRPGQPFPLPPFAEDAGEEPEMAGLYIIGHDGK CCCCCCCCCCCCCCCCCEEEECCCEEEEECCCCCCCCCCHHHCCCCCCCEEEEEEECCCC PYRLGFAVGNEFSDHVMERKNYLYLAHSKLRSCSYGPELRTGELPQHLAGTSRILRDGEV CEEEEEEECCCHHHHHHHHCCEEEEEEHHHHCCCCCCCCCCCCCCHHHHHHHHHHHCCCE LWQNEFLSGEANMCHSLANLEYHHFKYRQFLRPGDVHIHFFGTATLSFADGIRTQPGDVF EEECCCCCCCHHHHHHHHCCCHHHHHHHHHCCCCCEEEEEEEEEEEEHHCCCCCCCCCEE EISQAEFGAPLVNGIAPVAAAFEPDSIGTL EECCHHCCCHHHHHHHHHHHCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA