| Definition | Pseudomonas fluorescens Pf0-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007492 |
| Length | 6,438,405 |
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The map label for this gene is aldH [H]
Identifier: 77459446
GI number: 77459446
Start: 3703723
End: 3705303
Strand: Reverse
Name: aldH [H]
Synonym: Pfl01_3224
Alternate gene names: 77459446
Gene position: 3705303-3703723 (Counterclockwise)
Preceding gene: 77459447
Following gene: 77459445
Centisome position: 57.55
GC content: 63.82
Gene sequence:
>1581_bases ATGACTCAGATTCTCGGTCACAACTACATCGGCGGTCGTCGCAGCGCGGCGGGCAACGTCAAGCTGCAAAGCGTCGACGC CACTACGGGCGAAGCACTGCCCCACGATTTCATTCAGGCCACGGAAGCGGAAGTCGACGCCGCCGCAAAAGCCGCTGCGG CGGCGTATCCGGCGTATCGCAGCCTCAGCGCCGAACGCCGCGCGCAGTTTCTCGATGCGATTGCCGATGAGCTGGATGCG CTGGGCGATGATTTCGTCGCCGTGGTCTGCCGCGAGACCGCACTGCCGTCCGGGCGAATTCAAGGTGAAAGAGGTCGCAC CAGTGGCCAGATGCGCTTGTTCGCCAAAGTCCTGCGACGCGGTGATTTCTACGGTGCGCGCATCGACCTGCCGTTGCCCG ATCGTCAGCCGCTGCCGCGTCCGGATCTGCGCCAGTACCGCATCGGCCTCGGCCCGGTGGCGGTGTTCGGTGCAAGCAAC TTTCCACTGGCATTCTCCACCGCCGGCGGTGATACCGCGTCGGCGCTGGCGGCCGGTTGCCCGGTGGTGTTCAAGGCCCA CAGCGGTCATATGGCTACGGCCGAACTCGTCGCTGATGCGCTGATCCGCGCGGCGGAAAAAACCGCCATGCCGGCCGGTG TGTTCAACATGATCTACGGCGGTGGCGTCGGCGAATGGCTGGTCAAGCATCCGGCTATTCAGGCCGTGGGTTTCACCGGT TCGCTGCGAGGCGGACGGGCACTGTGTGACATGGCCGCCACGCGCCCTCAACCGATTCCGGTGTTCGCCGAGATGTCGAG CATCAACCCGGTGATCGTATTGCCCCAGGCTTTGGCCGTGCGTTCGGACACCGTCGCTCGCGATCTGACTGCGTCGGTGG TGCAGGGCTGCGGTCAGTTCTGTACCAATCCGGGTCTGGTGATCGGCATCCGTTCGCCACAGTTCACCGCGTTTGTTGAG CAAGTCGCGGCGCTGATCGGAGATCAAGCGGCGCAAACCATGCTCAATGCCGGCACCCTCGGCAGCTACGGCAAAGGCCT GGAAAAACTCCTGGCCCACGCCGGCATCGAGCATCTGGCGGGCAATCCGCAACAGGGCAATCAGGCGCAGCCGCAGTTGT TCAAGGCCGACGTCAGCCTGTTGATCGATGGCGATGAAGTGCTGCAGGAAGAAGTGTTCGGCCCGACTTCGGTGATCGTC GAAGTGGCCGACAAGGCGCAGCTGAGTGCGGCGTTGCAGGGCCTGCATGGGCAACTGACGGCGACAATTATCGGCGAACA GGCGGATTTCGAACGCTTCCCGGAGCTGACGCCATTGCTGGAGCAGAAGGTCGGTCGGATCCTGCTCAACGGTTATCCGA CCGGTGTTGAGGTTTGTGATTCGATGGTGCACGGCGGGCCGTATCCGGCGACGTCCGATGCCCGCGGCACCTCGGTGGGT ACGTTGGCGATCGATCGTTTCCTGCGCCCGGTGTGCTTCCAGAACTACCCCGACAGCCTGCTGCCGGAACCGCTGAAAAA CGCCAACCCGCTGCGCATTCAGCGGCTGGTCGACGGCAAGCCATCGCGCGAAGCCCTCTGA
Upstream 100 bases:
>100_bases AATCAGCCAGGCTGAATTCGGCGCACCGCTGGTCAACGGCATCGCCCCGGTCGCAGCGGCATTCGAACCGGACAGCATCG GCACCCTTTAAGGAGATCTC
Downstream 100 bases:
>100_bases CTCACGCCGCATGATCGTTCCCGCGAAGGGCGTGGGAGCGATCAAACGCGGGGCTTTGAGCTATCATTGGCCCTTTCCCC CCTGAAAGACATGATTGCCA
Product: aldehyde dehydrogenase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 526; Mature: 525
Protein sequence:
>526_residues MTQILGHNYIGGRRSAAGNVKLQSVDATTGEALPHDFIQATEAEVDAAAKAAAAAYPAYRSLSAERRAQFLDAIADELDA LGDDFVAVVCRETALPSGRIQGERGRTSGQMRLFAKVLRRGDFYGARIDLPLPDRQPLPRPDLRQYRIGLGPVAVFGASN FPLAFSTAGGDTASALAAGCPVVFKAHSGHMATAELVADALIRAAEKTAMPAGVFNMIYGGGVGEWLVKHPAIQAVGFTG SLRGGRALCDMAATRPQPIPVFAEMSSINPVIVLPQALAVRSDTVARDLTASVVQGCGQFCTNPGLVIGIRSPQFTAFVE QVAALIGDQAAQTMLNAGTLGSYGKGLEKLLAHAGIEHLAGNPQQGNQAQPQLFKADVSLLIDGDEVLQEEVFGPTSVIV EVADKAQLSAALQGLHGQLTATIIGEQADFERFPELTPLLEQKVGRILLNGYPTGVEVCDSMVHGGPYPATSDARGTSVG TLAIDRFLRPVCFQNYPDSLLPEPLKNANPLRIQRLVDGKPSREAL
Sequences:
>Translated_526_residues MTQILGHNYIGGRRSAAGNVKLQSVDATTGEALPHDFIQATEAEVDAAAKAAAAAYPAYRSLSAERRAQFLDAIADELDA LGDDFVAVVCRETALPSGRIQGERGRTSGQMRLFAKVLRRGDFYGARIDLPLPDRQPLPRPDLRQYRIGLGPVAVFGASN FPLAFSTAGGDTASALAAGCPVVFKAHSGHMATAELVADALIRAAEKTAMPAGVFNMIYGGGVGEWLVKHPAIQAVGFTG SLRGGRALCDMAATRPQPIPVFAEMSSINPVIVLPQALAVRSDTVARDLTASVVQGCGQFCTNPGLVIGIRSPQFTAFVE QVAALIGDQAAQTMLNAGTLGSYGKGLEKLLAHAGIEHLAGNPQQGNQAQPQLFKADVSLLIDGDEVLQEEVFGPTSVIV EVADKAQLSAALQGLHGQLTATIIGEQADFERFPELTPLLEQKVGRILLNGYPTGVEVCDSMVHGGPYPATSDARGTSVG TLAIDRFLRPVCFQNYPDSLLPEPLKNANPLRIQRLVDGKPSREAL >Mature_525_residues TQILGHNYIGGRRSAAGNVKLQSVDATTGEALPHDFIQATEAEVDAAAKAAAAAYPAYRSLSAERRAQFLDAIADELDAL GDDFVAVVCRETALPSGRIQGERGRTSGQMRLFAKVLRRGDFYGARIDLPLPDRQPLPRPDLRQYRIGLGPVAVFGASNF PLAFSTAGGDTASALAAGCPVVFKAHSGHMATAELVADALIRAAEKTAMPAGVFNMIYGGGVGEWLVKHPAIQAVGFTGS LRGGRALCDMAATRPQPIPVFAEMSSINPVIVLPQALAVRSDTVARDLTASVVQGCGQFCTNPGLVIGIRSPQFTAFVEQ VAALIGDQAAQTMLNAGTLGSYGKGLEKLLAHAGIEHLAGNPQQGNQAQPQLFKADVSLLIDGDEVLQEEVFGPTSVIVE VADKAQLSAALQGLHGQLTATIIGEQADFERFPELTPLLEQKVGRILLNGYPTGVEVCDSMVHGGPYPATSDARGTSVGT LAIDRFLRPVCFQNYPDSLLPEPLKNANPLRIQRLVDGKPSREAL
Specific function: Catalyzes the oxidation of long-chain aliphatic aldehydes to acids. May be implicated in controlling luminescence as it catalyzes the oxidation of the fatty aldehyde substrate for the light-emitting reaction [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the aldehyde dehydrogenase family [H]
Homologues:
Organism=Homo sapiens, GI4507229, Length=270, Percent_Identity=29.6296296296296, Blast_Score=73, Evalue=6e-13, Organism=Homo sapiens, GI115387104, Length=442, Percent_Identity=24.4343891402715, Blast_Score=71, Evalue=2e-12, Organism=Homo sapiens, GI25777721, Length=279, Percent_Identity=28.673835125448, Blast_Score=69, Evalue=1e-11, Organism=Escherichia coli, GI1789015, Length=390, Percent_Identity=27.6923076923077, Blast_Score=86, Evalue=6e-18, Organism=Escherichia coli, GI87081896, Length=423, Percent_Identity=27.1867612293144, Blast_Score=73, Evalue=5e-14, Organism=Escherichia coli, GI1786504, Length=414, Percent_Identity=27.536231884058, Blast_Score=69, Evalue=7e-13, Organism=Escherichia coli, GI1787250, Length=432, Percent_Identity=25.6944444444444, Blast_Score=64, Evalue=3e-11, Organism=Caenorhabditis elegans, GI25143874, Length=319, Percent_Identity=24.4514106583072, Blast_Score=69, Evalue=5e-12, Organism=Caenorhabditis elegans, GI25143876, Length=319, Percent_Identity=24.4514106583072, Blast_Score=69, Evalue=6e-12, Organism=Saccharomyces cerevisiae, GI6319478, Length=338, Percent_Identity=25.1479289940828, Blast_Score=80, Evalue=8e-16, Organism=Saccharomyces cerevisiae, GI6323822, Length=409, Percent_Identity=25.9168704156479, Blast_Score=65, Evalue=2e-11, Organism=Drosophila melanogaster, GI281362580, Length=385, Percent_Identity=25.7142857142857, Blast_Score=72, Evalue=1e-12, Organism=Drosophila melanogaster, GI62472918, Length=385, Percent_Identity=25.7142857142857, Blast_Score=72, Evalue=1e-12, Organism=Drosophila melanogaster, GI62472926, Length=385, Percent_Identity=25.7142857142857, Blast_Score=72, Evalue=1e-12, Organism=Drosophila melanogaster, GI62472936, Length=385, Percent_Identity=25.7142857142857, Blast_Score=72, Evalue=1e-12, Organism=Drosophila melanogaster, GI21356737, Length=385, Percent_Identity=25.7142857142857, Blast_Score=72, Evalue=1e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR016161 - InterPro: IPR016163 - InterPro: IPR016162 - InterPro: IPR015590 [H]
Pfam domain/function: PF00171 Aldedh [H]
EC number: =1.2.1.4 [H]
Molecular weight: Translated: 55519; Mature: 55388
Theoretical pI: Translated: 5.87; Mature: 5.87
Prosite motif: PS00070 ALDEHYDE_DEHYDR_CYS
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTQILGHNYIGGRRSAAGNVKLQSVDATTGEALPHDFIQATEAEVDAAAKAAAAAYPAYR CCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH SLSAERRAQFLDAIADELDALGDDFVAVVCRETALPSGRIQGERGRTSGQMRLFAKVLRR HHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHC GDFYGARIDLPLPDRQPLPRPDLRQYRIGLGPVAVFGASNFPLAFSTAGGDTASALAAGC CCCCCCEEECCCCCCCCCCCCCHHHHHCCCCCEEEECCCCCCEEEECCCCCHHHHHHCCC PVVFKAHSGHMATAELVADALIRAAEKTAMPAGVFNMIYGGGVGEWLVKHPAIQAVGFTG CEEEEECCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCHHHHHHHCCCCEEECCCC SLRGGRALCDMAATRPQPIPVFAEMSSINPVIVLPQALAVRSDTVARDLTASVVQGCGQF CCCCCHHHHHHHHCCCCCCCCEEHHCCCCCEEECCCHHHHHHHHHHHHHHHHHHHHHHHH CTNPGLVIGIRSPQFTAFVEQVAALIGDQAAQTMLNAGTLGSYGKGLEKLLAHAGIEHLA HCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCHHHHC GNPQQGNQAQPQLFKADVSLLIDGDEVLQEEVFGPTSVIVEVADKAQLSAALQGLHGQLT CCCCCCCCCCCHHHCCCEEEEECCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCEEE ATIIGEQADFERFPELTPLLEQKVGRILLNGYPTGVEVCDSMVHGGPYPATSDARGTSVG EEEECCCCCHHHCCCHHHHHHHHHHHEEECCCCCHHHHHHHHHCCCCCCCCCCCCCCCHH TLAIDRFLRPVCFQNYPDSLLPEPLKNANPLRIQRLVDGKPSREAL HHHHHHHHHHHHHCCCCHHCCCCCCCCCCCEEEHHHHCCCCCCCCC >Mature Secondary Structure TQILGHNYIGGRRSAAGNVKLQSVDATTGEALPHDFIQATEAEVDAAAKAAAAAYPAYR CCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH SLSAERRAQFLDAIADELDALGDDFVAVVCRETALPSGRIQGERGRTSGQMRLFAKVLRR HHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHC GDFYGARIDLPLPDRQPLPRPDLRQYRIGLGPVAVFGASNFPLAFSTAGGDTASALAAGC CCCCCCEEECCCCCCCCCCCCCHHHHHCCCCCEEEECCCCCCEEEECCCCCHHHHHHCCC PVVFKAHSGHMATAELVADALIRAAEKTAMPAGVFNMIYGGGVGEWLVKHPAIQAVGFTG CEEEEECCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCHHHHHHHCCCCEEECCCC SLRGGRALCDMAATRPQPIPVFAEMSSINPVIVLPQALAVRSDTVARDLTASVVQGCGQF CCCCCHHHHHHHHCCCCCCCCEEHHCCCCCEEECCCHHHHHHHHHHHHHHHHHHHHHHHH CTNPGLVIGIRSPQFTAFVEQVAALIGDQAAQTMLNAGTLGSYGKGLEKLLAHAGIEHLA HCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCHHHHC GNPQQGNQAQPQLFKADVSLLIDGDEVLQEEVFGPTSVIVEVADKAQLSAALQGLHGQLT CCCCCCCCCCCHHHCCCEEEEECCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCEEE ATIIGEQADFERFPELTPLLEQKVGRILLNGYPTGVEVCDSMVHGGPYPATSDARGTSVG EEEECCCCCHHHCCCHHHHHHHHHHHEEECCCCCHHHHHHHHHCCCCCCCCCCCCCCCHH TLAIDRFLRPVCFQNYPDSLLPEPLKNANPLRIQRLVDGKPSREAL HHHHHHHHHHHHHCCCCHHCCCCCCCCCCCEEEHHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8527447; 10903148 [H]