| Definition | Pseudomonas fluorescens Pf0-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007492 |
| Length | 6,438,405 |
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The map label for this gene is afr [H]
Identifier: 77459387
GI number: 77459387
Start: 3633663
End: 3634631
Strand: Reverse
Name: afr [H]
Synonym: Pfl01_3165
Alternate gene names: 77459387
Gene position: 3634631-3633663 (Counterclockwise)
Preceding gene: 77459388
Following gene: 77459386
Centisome position: 56.45
GC content: 64.19
Gene sequence:
>969_bases ATGAACGTGGTGCGTTGGGACATGATCGGTTGCGGCAGCGTCGCCGAACGCAAGAGCGGGCCGGCCTTCTACAAGGCGCC CGGCTCGGCGTTGGTGGCGGTGATGGGGCGACGTCTCGAAGCGGTGACCGATTACGCCGCGCGCCACGGCATCGCTCGGA CGTACACCGACGTCGATGCCCTGATCAACGACCCCGAGGTGGACGCGGTGTACATCGCCACACCACCCGATAGCCACCAC ACCTACAGCCTGAAAGTCGCCGCCGCCGGCAAGCACTGCTGCGTGGAGAAACCCATGGCGCTCAACGCCGGGCAAAGCCG CGAGATGCAGCAGGCGTTCGCCGAGGCTGGTCTGCACCTGTTCGTCTCCTATTACCGCCGTTCGTTACCGCGTTTCCAGC AGGTTCGGCAGTGGCTGGAGCAGGGCCGCATCGGCCAGGTGCGGCATCTGAGCTGGACGCTGACCAAGGCACCATCGCCC AAGGATCTGGACGGCAGCGCAAACTGGCGCACCGATCCGGCGGTCGCCGGGGGCGGGTATTTCGCGGATCTGGCCAGCCA TGGTTTTGACCTGTTCCAGTACCTGCTTGGCGACATCGTCGAAGTCGCCGGTTTCACCGCGCGTCAGGCCGGGTTGTACG CCGCGGAGGATGCGGTCAGCGCCAGTTGGCGATTCGCCTCGGGCGCGCTGGGCATGGGTTGCTGGAGCTTTGTTGCGGAT CGCCGTGAGGATCGGGTCGAGATCATTGGCAGCCAAGGGCGGATCGGCTTTTCGGTGTTCGACGAGCATCCGGTCGAGCT GCATGCCGACGAACACATCAGCCTGGAAATCCCCCATCACGAACACATCCAGTGGCATCACGTACTCGGTATGAACGCGC AGATTCGCGGTGAGTCGCAGCACCCGGCAATCGCCGCCGAAGCCCTGAAGACCGATTGGGTCATGGATCAGATCCTCAAA CGCCACTGA
Upstream 100 bases:
>100_bases TCGCATCAGCCGGCCGATCACCGGCGGCTATTACTGGTGCCCGCCGCTGCAAAACGGCCACCTCGATCTGCGCGCACTGC GCATCGGCTGAGGCACAAGC
Downstream 100 bases:
>100_bases AGGCGCATCTAACCTTATGCTCATTCGGTATTTCTCAAGCTTGTCATAACGTCTCTAAGATCACGTCATAACTCGTTATG ACAAGTGATTCCGTGATGAC
Product: oxidoreductase-like protein
Products: NA
Alternate protein names: Anhydrofructose reductase; 1,5-anhydro-D-fructose reductase (1,5-anhydro-D-mannitol-forming) [H]
Number of amino acids: Translated: 322; Mature: 322
Protein sequence:
>322_residues MNVVRWDMIGCGSVAERKSGPAFYKAPGSALVAVMGRRLEAVTDYAARHGIARTYTDVDALINDPEVDAVYIATPPDSHH TYSLKVAAAGKHCCVEKPMALNAGQSREMQQAFAEAGLHLFVSYYRRSLPRFQQVRQWLEQGRIGQVRHLSWTLTKAPSP KDLDGSANWRTDPAVAGGGYFADLASHGFDLFQYLLGDIVEVAGFTARQAGLYAAEDAVSASWRFASGALGMGCWSFVAD RREDRVEIIGSQGRIGFSVFDEHPVELHADEHISLEIPHHEHIQWHHVLGMNAQIRGESQHPAIAAEALKTDWVMDQILK RH
Sequences:
>Translated_322_residues MNVVRWDMIGCGSVAERKSGPAFYKAPGSALVAVMGRRLEAVTDYAARHGIARTYTDVDALINDPEVDAVYIATPPDSHH TYSLKVAAAGKHCCVEKPMALNAGQSREMQQAFAEAGLHLFVSYYRRSLPRFQQVRQWLEQGRIGQVRHLSWTLTKAPSP KDLDGSANWRTDPAVAGGGYFADLASHGFDLFQYLLGDIVEVAGFTARQAGLYAAEDAVSASWRFASGALGMGCWSFVAD RREDRVEIIGSQGRIGFSVFDEHPVELHADEHISLEIPHHEHIQWHHVLGMNAQIRGESQHPAIAAEALKTDWVMDQILK RH >Mature_322_residues MNVVRWDMIGCGSVAERKSGPAFYKAPGSALVAVMGRRLEAVTDYAARHGIARTYTDVDALINDPEVDAVYIATPPDSHH TYSLKVAAAGKHCCVEKPMALNAGQSREMQQAFAEAGLHLFVSYYRRSLPRFQQVRQWLEQGRIGQVRHLSWTLTKAPSP KDLDGSANWRTDPAVAGGGYFADLASHGFDLFQYLLGDIVEVAGFTARQAGLYAAEDAVSASWRFASGALGMGCWSFVAD RREDRVEIIGSQGRIGFSVFDEHPVELHADEHISLEIPHHEHIQWHHVLGMNAQIRGESQHPAIAAEALKTDWVMDQILK RH
Specific function: Catalyzes the NADPH-specific reduction of 1,5-anhydro-D- fructose to 1,5-anhydro-D-mannitol [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the gfo/idh/mocA family [H]
Homologues:
Organism=Homo sapiens, GI7657212, Length=147, Percent_Identity=29.9319727891156, Blast_Score=70, Evalue=2e-12, Organism=Escherichia coli, GI1787574, Length=337, Percent_Identity=24.6290801186944, Blast_Score=78, Evalue=6e-16, Organism=Escherichia coli, GI87082405, Length=228, Percent_Identity=27.1929824561404, Blast_Score=73, Evalue=3e-14, Organism=Escherichia coli, GI87081947, Length=195, Percent_Identity=28.7179487179487, Blast_Score=67, Evalue=1e-12, Organism=Escherichia coli, GI1789848, Length=199, Percent_Identity=26.1306532663317, Blast_Score=63, Evalue=3e-11, Organism=Saccharomyces cerevisiae, GI6323975, Length=269, Percent_Identity=23.4200743494424, Blast_Score=68, Evalue=2e-12, Organism=Drosophila melanogaster, GI24581117, Length=232, Percent_Identity=27.5862068965517, Blast_Score=75, Evalue=6e-14,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR016040 - InterPro: IPR000683 - InterPro: IPR004104 [H]
Pfam domain/function: PF01408 GFO_IDH_MocA; PF02894 GFO_IDH_MocA_C [H]
EC number: =1.1.1.292 [H]
Molecular weight: Translated: 35628; Mature: 35628
Theoretical pI: Translated: 6.66; Mature: 6.66
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNVVRWDMIGCGSVAERKSGPAFYKAPGSALVAVMGRRLEAVTDYAARHGIARTYTDVDA CCCEEEECCCCCCHHHCCCCCCEEECCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHH LINDPEVDAVYIATPPDSHHTYSLKVAAAGKHCCVEKPMALNAGQSREMQQAFAEAGLHL HCCCCCCCEEEEECCCCCCCEEEEEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHH FVSYYRRSLPRFQQVRQWLEQGRIGQVRHLSWTLTKAPSPKDLDGSANWRTDPAVAGGGY HHHHHHHCCHHHHHHHHHHHCCCCCCEEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCH FADLASHGFDLFQYLLGDIVEVAGFTARQAGLYAAEDAVSASWRFASGALGMGCWSFVAD HHHHHHCHHHHHHHHHHHHHHHHCCHHHHCCCEEHHHHHCCCEEECCCCCHHHHHHHHHH RREDRVEIIGSQGRIGFSVFDEHPVELHADEHISLEIPHHEHIQWHHVLGMNAQIRGESQ CCCCCEEEECCCCCEEEEECCCCCEEEECCCEEEEECCCCCCCEEEEEECCCCEECCCCC HPAIAAEALKTDWVMDQILKRH CCHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MNVVRWDMIGCGSVAERKSGPAFYKAPGSALVAVMGRRLEAVTDYAARHGIARTYTDVDA CCCEEEECCCCCCHHHCCCCCCEEECCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHH LINDPEVDAVYIATPPDSHHTYSLKVAAAGKHCCVEKPMALNAGQSREMQQAFAEAGLHL HCCCCCCCEEEEECCCCCCCEEEEEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHH FVSYYRRSLPRFQQVRQWLEQGRIGQVRHLSWTLTKAPSPKDLDGSANWRTDPAVAGGGY HHHHHHHCCHHHHHHHHHHHCCCCCCEEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCH FADLASHGFDLFQYLLGDIVEVAGFTARQAGLYAAEDAVSASWRFASGALGMGCWSFVAD HHHHHHCHHHHHHHHHHHHHHHHCCHHHHCCCEEHHHHHCCCEEECCCCCHHHHHHHHHH RREDRVEIIGSQGRIGFSVFDEHPVELHADEHISLEIPHHEHIQWHHVLGMNAQIRGESQ CCCCCEEEECCCCCEEEEECCCCCEEEECCCEEEEECCCCCCCEEEEEECCCCEECCCCC HPAIAAEALKTDWVMDQILKRH CCHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11481430 [H]