Click here to switch to the map view.

The map label for this gene is yfeX [H]

Identifier: 77459388

GI number: 77459388

Start: 3634641

End: 3635528

Strand: Reverse

Name: yfeX [H]

Synonym: Pfl01_3166

Alternate gene names: 77459388

Gene position: 3635528-3634641 (Counterclockwise)

Preceding gene: 77459389

Following gene: 77459387

Centisome position: 56.47

GC content: 64.41

Gene sequence:

>888_bases
ATGAGTTACTACCAGCCGGGCATCCTCGCCACCCCCGTTCCGCCACAAGCACGTCACCTGTTTTTCGCCCTTGATTCGGT
TGAAGCGCTGCCGCAGGCGATCGACAACCTGCTGAACCTGGTGGACGGCAAGTCGGCGGTGGTCGGTTTCGGTGAATCCC
TGGCCAAGGCCCTGAAGGTGAACATCGACGGCCTGCGCAGCTTCCCGGCGCTGACCGGCGTTGGCGTGGAAAACCCGTCG
ACCCAGCACGCCCTGTGGGTCTGGCTGCACGGTGTCGACCGTGGCGATCTGCTCAATCGCAGCACCGCACTTGAGGCCGC
ACTGGCCCCGGCGCTGCGTCTGGTGCAGATGCAGGAGGCCTTTCGCCATAAGGACGGCCATGACCTCACCGGTTATGAAG
ACGGCACCGAAAACCCGCACGACGAAGCCGCCATCGCCGCCGCACTGCAAAGTGACGGCGCGGACGGTCTGGTCGGTGGC
AGCTTCGCCGCAATCCAGCAATGGCAGCACGACCTCAAGGGTTTCCATGCGTTGTCCGCCGAGGACAAGGACAACATCAT
GGGCCGTCGCCTGAGCGACAACGAAGAGATCGACGACGCCCCGGTGTCCGCCCACGTCAAACGCACCGCCCAGGAAAGCT
TCGCCCCGGAAGCCTTCGTCGTGCGTCGTTCGATGCCGTGGATCGAAGGCGACCGCGCCGGCCTGATGTTCCTGGCGTTC
GGCTTCTCCCTCGATGCCTTTGAAGCGCAACTGCGCCGTATGAGCGGTCTGGAAGACGGCATCACCGACGGTCTCTATCG
CATCAGCCGGCCGATCACCGGCGGCTATTACTGGTGCCCGCCGCTGCAAAACGGCCACCTCGATCTGCGCGCACTGCGCA
TCGGCTGA

Upstream 100 bases:

>100_bases
GGGCTAGGGTGAGGGGGCCTTTGAGGCTACCCAACCCATTTCAATCCCCCACAAACCCTCCGCCTACAGTTAAACTCCGC
GCTCTTTCCAAGGAGTCGAC

Downstream 100 bases:

>100_bases
GGCACAAGCATGAACGTGGTGCGTTGGGACATGATCGGTTGCGGCAGCGTCGCCGAACGCAAGAGCGGGCCGGCCTTCTA
CAAGGCGCCCGGCTCGGCGT

Product: Dyp-type peroxidase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 295; Mature: 294

Protein sequence:

>295_residues
MSYYQPGILATPVPPQARHLFFALDSVEALPQAIDNLLNLVDGKSAVVGFGESLAKALKVNIDGLRSFPALTGVGVENPS
TQHALWVWLHGVDRGDLLNRSTALEAALAPALRLVQMQEAFRHKDGHDLTGYEDGTENPHDEAAIAAALQSDGADGLVGG
SFAAIQQWQHDLKGFHALSAEDKDNIMGRRLSDNEEIDDAPVSAHVKRTAQESFAPEAFVVRRSMPWIEGDRAGLMFLAF
GFSLDAFEAQLRRMSGLEDGITDGLYRISRPITGGYYWCPPLQNGHLDLRALRIG

Sequences:

>Translated_295_residues
MSYYQPGILATPVPPQARHLFFALDSVEALPQAIDNLLNLVDGKSAVVGFGESLAKALKVNIDGLRSFPALTGVGVENPS
TQHALWVWLHGVDRGDLLNRSTALEAALAPALRLVQMQEAFRHKDGHDLTGYEDGTENPHDEAAIAAALQSDGADGLVGG
SFAAIQQWQHDLKGFHALSAEDKDNIMGRRLSDNEEIDDAPVSAHVKRTAQESFAPEAFVVRRSMPWIEGDRAGLMFLAF
GFSLDAFEAQLRRMSGLEDGITDGLYRISRPITGGYYWCPPLQNGHLDLRALRIG
>Mature_294_residues
SYYQPGILATPVPPQARHLFFALDSVEALPQAIDNLLNLVDGKSAVVGFGESLAKALKVNIDGLRSFPALTGVGVENPST
QHALWVWLHGVDRGDLLNRSTALEAALAPALRLVQMQEAFRHKDGHDLTGYEDGTENPHDEAAIAAALQSDGADGLVGGS
FAAIQQWQHDLKGFHALSAEDKDNIMGRRLSDNEEIDDAPVSAHVKRTAQESFAPEAFVVRRSMPWIEGDRAGLMFLAFG
FSLDAFEAQLRRMSGLEDGITDGLYRISRPITGGYYWCPPLQNGHLDLRALRIG

Specific function: Unknown

COG id: COG2837

COG function: function code P; Predicted iron-dependent peroxidase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the DyP-type peroxidase family [H]

Homologues:

Organism=Escherichia coli, GI87082102, Length=301, Percent_Identity=30.5647840531561, Blast_Score=122, Evalue=4e-29,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011008
- InterPro:   IPR006314 [H]

Pfam domain/function: PF04261 Dyp_perox [H]

EC number: NA

Molecular weight: Translated: 32126; Mature: 31994

Theoretical pI: Translated: 4.91; Mature: 4.91

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSYYQPGILATPVPPQARHLFFALDSVEALPQAIDNLLNLVDGKSAVVGFGESLAKALKV
CCCCCCCEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHEEECCHHHHHHHHC
NIDGLRSFPALTGVGVENPSTQHALWVWLHGVDRGDLLNRSTALEAALAPALRLVQMQEA
CHHHHHHCCCCCCCCCCCCCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
FRHKDGHDLTGYEDGTENPHDEAAIAAALQSDGADGLVGGSFAAIQQWQHDLKGFHALSA
HHCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHEECCC
EDKDNIMGRRLSDNEEIDDAPVSAHVKRTAQESFAPEAFVVRRSMPWIEGDRAGLMFLAF
CCCHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCEEEECCCCCCCCCCCCEEEEEE
GFSLDAFEAQLRRMSGLEDGITDGLYRISRPITGGYYWCPPLQNGHLDLRALRIG
CCCHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCCEEECCCCCCCCEEEEEEECC
>Mature Secondary Structure 
SYYQPGILATPVPPQARHLFFALDSVEALPQAIDNLLNLVDGKSAVVGFGESLAKALKV
CCCCCCEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHEEECCHHHHHHHHC
NIDGLRSFPALTGVGVENPSTQHALWVWLHGVDRGDLLNRSTALEAALAPALRLVQMQEA
CHHHHHHCCCCCCCCCCCCCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
FRHKDGHDLTGYEDGTENPHDEAAIAAALQSDGADGLVGGSFAAIQQWQHDLKGFHALSA
HHCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHEECCC
EDKDNIMGRRLSDNEEIDDAPVSAHVKRTAQESFAPEAFVVRRSMPWIEGDRAGLMFLAF
CCCHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCEEEECCCCCCCCCCCCEEEEEE
GFSLDAFEAQLRRMSGLEDGITDGLYRISRPITGGYYWCPPLQNGHLDLRALRIG
CCCHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCCEEECCCCCCCCEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]