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The map label for this gene is xerD [H]

Identifier: 77459151

GI number: 77459151

Start: 3371554

End: 3372492

Strand: Reverse

Name: xerD [H]

Synonym: Pfl01_2926

Alternate gene names: 77459151

Gene position: 3372492-3371554 (Counterclockwise)

Preceding gene: 77459153

Following gene: 77459150

Centisome position: 52.38

GC content: 63.68

Gene sequence:

>939_bases
ATGAGCGATATCGATCGCTATCTGCAAGCCGCCACCCGCGACAACACCCGCCGCAGTTATCGCGCGGCCATCGAGCACTT
CGAATCCGCGTGGGGAGGGTTCCTGCCGGCCACAGCGGACAGCGTCGCGCGGTATCTGGTGGCGCATGCGGGCGTGCTGT
CGGTCAACACGCTGAAGTTGCGTCTGTCGGCACTGGCGCAGTGGCACAACAGCCAGGGCTTCGCCGATCCCACCAAGTCG
CCGGTGGTGCGCAAGGTGTTCAAGGGCATTCGCGCCCTGCATCCCGCGCAGGAAAAACAGGCCGAGCCACTCCAACTGCG
CGATCTTGAGCAGACCGTCGCCTGGCTTGAGCAGGAAATGAAAGACGCCCGGGAACAACAGGACCGGCCGCTGCTGCTCC
GAGCTTGCCGTGATCGGGCGTTGATCCTGCTGGGCTTCTGGCGCGGCTTCCGCAGCGATGAGCTGTGTCGGGTGCAGATC
GAGCATGTGCAGGCGCACGCCGGCAACGGCATCACCTTGTACCTGCCGCGCAGCAAGGGCGATCGGGAAAACCTCGGGCA
GACCTATCAGGCCCCGGCGCTGCTGAAGTTGTGTCCGGTGCAGGCTTATATCGAGTGGATCACCGAGGCAGCACTGGTGC
GAGGACCGGTGTTTCGCGCCGTCGACCGCTGGGGCAACCTGAGCGAAGAGGGGTTGCACGCCAACAGCGTGATTCCGTTG
CTGCGTCAGGCCCTGGAGCGAGCCGGGATCTCCGCCGAGCGCTACACCAGCCACTCCCTGCGTCGCGGCTTCGCAACATG
GGCCCACCAAAGCGGCTGGGATCTCAAATCATTGATGAGTTACGTGGGCTGGAAGGATATGAAGTCCGCTATGCGCTATG
TTGAAGCGAGCCCCTTTCACGGGATGGCCCGGATTACGGATAAACCGCTGTCGCCGTAG

Upstream 100 bases:

>100_bases
AGCGCCGACAAACGGACGGGATATACTGGTATTACCCCATGTGAAACCCATAAAATCCGTTTCTGCACGAACCCTCAGTA
CGCCACGAGAAAATCAGCCC

Downstream 100 bases:

>100_bases
ATATCGTTTTCTTCTATTAATACCTTCAGCTAATAGCGAAAACAAATCAGCAGCATCAGGTTTGCCAATGAGCCATCCGT
CGAGTGACTGGGTAGGATTC

Product: Phage integrase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 312; Mature: 311

Protein sequence:

>312_residues
MSDIDRYLQAATRDNTRRSYRAAIEHFESAWGGFLPATADSVARYLVAHAGVLSVNTLKLRLSALAQWHNSQGFADPTKS
PVVRKVFKGIRALHPAQEKQAEPLQLRDLEQTVAWLEQEMKDAREQQDRPLLLRACRDRALILLGFWRGFRSDELCRVQI
EHVQAHAGNGITLYLPRSKGDRENLGQTYQAPALLKLCPVQAYIEWITEAALVRGPVFRAVDRWGNLSEEGLHANSVIPL
LRQALERAGISAERYTSHSLRRGFATWAHQSGWDLKSLMSYVGWKDMKSAMRYVEASPFHGMARITDKPLSP

Sequences:

>Translated_312_residues
MSDIDRYLQAATRDNTRRSYRAAIEHFESAWGGFLPATADSVARYLVAHAGVLSVNTLKLRLSALAQWHNSQGFADPTKS
PVVRKVFKGIRALHPAQEKQAEPLQLRDLEQTVAWLEQEMKDAREQQDRPLLLRACRDRALILLGFWRGFRSDELCRVQI
EHVQAHAGNGITLYLPRSKGDRENLGQTYQAPALLKLCPVQAYIEWITEAALVRGPVFRAVDRWGNLSEEGLHANSVIPL
LRQALERAGISAERYTSHSLRRGFATWAHQSGWDLKSLMSYVGWKDMKSAMRYVEASPFHGMARITDKPLSP
>Mature_311_residues
SDIDRYLQAATRDNTRRSYRAAIEHFESAWGGFLPATADSVARYLVAHAGVLSVNTLKLRLSALAQWHNSQGFADPTKSP
VVRKVFKGIRALHPAQEKQAEPLQLRDLEQTVAWLEQEMKDAREQQDRPLLLRACRDRALILLGFWRGFRSDELCRVQIE
HVQAHAGNGITLYLPRSKGDRENLGQTYQAPALLKLCPVQAYIEWITEAALVRGPVFRAVDRWGNLSEEGLHANSVIPLL
RQALERAGISAERYTSHSLRRGFATWAHQSGWDLKSLMSYVGWKDMKSAMRYVEASPFHGMARITDKPLSP

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the 'phage' integrase family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011010
- InterPro:   IPR013762
- InterPro:   IPR002104
- InterPro:   IPR010998
- InterPro:   IPR023109 [H]

Pfam domain/function: PF00589 Phage_integrase [H]

EC number: NA

Molecular weight: Translated: 35326; Mature: 35195

Theoretical pI: Translated: 9.93; Mature: 9.93

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSDIDRYLQAATRDNTRRSYRAAIEHFESAWGGFLPATADSVARYLVAHAGVLSVNTLKL
CCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCHHHHHHHHH
RLSALAQWHNSQGFADPTKSPVVRKVFKGIRALHPAQEKQAEPLQLRDLEQTVAWLEQEM
HHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHCCCHHHCCCCCHHHHHHHHHHHHHHHH
KDAREQQDRPLLLRACRDRALILLGFWRGFRSDELCRVQIEHVQAHAGNGITLYLPRSKG
HHHHHHCCCHHHHHHHCCCCEEHHHHHCCCCCCCHHHHHHHHHHHHCCCCEEEEEECCCC
DRENLGQTYQAPALLKLCPVQAYIEWITEAALVRGPVFRAVDRWGNLSEEGLHANSVIPL
CHHHCCCHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHH
LRQALERAGISAERYTSHSLRRGFATWAHQSGWDLKSLMSYVGWKDMKSAMRYVEASPFH
HHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCHHHHHHHHHHHHCCCCC
GMARITDKPLSP
CHHHHCCCCCCC
>Mature Secondary Structure 
SDIDRYLQAATRDNTRRSYRAAIEHFESAWGGFLPATADSVARYLVAHAGVLSVNTLKL
CHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCHHHHHHHHH
RLSALAQWHNSQGFADPTKSPVVRKVFKGIRALHPAQEKQAEPLQLRDLEQTVAWLEQEM
HHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHCCCHHHCCCCCHHHHHHHHHHHHHHHH
KDAREQQDRPLLLRACRDRALILLGFWRGFRSDELCRVQIEHVQAHAGNGITLYLPRSKG
HHHHHHCCCHHHHHHHCCCCEEHHHHHCCCCCCCHHHHHHHHHHHHCCCCEEEEEECCCC
DRENLGQTYQAPALLKLCPVQAYIEWITEAALVRGPVFRAVDRWGNLSEEGLHANSVIPL
CHHHCCCHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHH
LRQALERAGISAERYTSHSLRRGFATWAHQSGWDLKSLMSYVGWKDMKSAMRYVEASPFH
HHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCHHHHHHHHHHHHCCCCC
GMARITDKPLSP
CHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11073919 [H]