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The map label for this gene is yhcS [C]

Identifier: 77459076

GI number: 77459076

Start: 3288836

End: 3289801

Strand: Reverse

Name: yhcS [C]

Synonym: Pfl01_2851

Alternate gene names: 77459076

Gene position: 3289801-3288836 (Counterclockwise)

Preceding gene: 77459091

Following gene: 77459065

Centisome position: 51.1

GC content: 58.49

Gene sequence:

>966_bases
ATGGAAACCCCACTTTCCAATTCCGGAAACCCACCGGTCAAAACCGCTCACCGGGCACCGTTGGCCCTCAGCGGACTGGA
TTTCAAACTGCTCAAGGTGTTCAAGGCGGTAGTCGAGGCCGGCGGCTTCAGCGCGGCGCAAAACGAGCTGAACGTGGGCC
TGGCCGCGATCAGCAAGCAGATATCCGACCTCGAAATCCGCATCGGCATGCGCCTGTGCACCCGGGGGCGCGAAGGGTTT
CACCTGACCGAGGAAGGGCGTCTGGTGTATCAGGCGTCGATTGATCTGTTTGCCTCGGTCGACAACTTTCGTGACCGGCT
TAGTTCTGCGCAGAACGAACTTATCGGCGATCTCGGAGTGGGGGTGATCGACAATACGATTAGCGATGATAATTCACCGT
TAGTTGCCGCGCTTAGAAAGATAAATGAACATTCTCCGAAAGTAAGGTTTCAACTTCAGTCGACCCAATTGGATGAAGTG
GAAAGAGGCGTGGTGGAAGGTCGCTTAGTTGCCGGAATAGTCCCGGTATATCAGAAACGCGAAGAGTTCGATTATTACCC
GCTCTATGAAGAACGCTCGCAGGCTTACTGCGCGGTCGGCCACCCGTTGTTCGAGATGCCGGCGGAGCAGATGGGCGGTA
ACGTGCTGCAGGATTACGAGTGCATCAACCACCGCTACGCGATCCATCGCGACAAGCTCAACTTCGCCCGCTACGACAGT
TTTTCCGCCTCGGCGACCCAGGTCGAAGCGGTCGCGTTGCTGATCAAGACCGGGCGTTTCGTGGGCTTTCTGCCGCAGCA
TTACGCCGCCGCGCTGGTGGCCGCCGGGCAGTTCCGCGCGGTGTGCCCGGAGCTGATCCACTTCGACACGCCATTCAATC
TGATCCTGCGCCACAACACCGTGCGCAGTCCGCTGGTCAAGGCGTTTGCCCAGGCGCTGGGGGTTGATCTCAAGGCGACG
GCGTGA

Upstream 100 bases:

>100_bases
GTTGCCAAGGCTGGTTTTCTGTGATCATTATTATTAGCCGGCGATGTTTTTGTTGTTGGACACAGATTGTTGAACATTGC
GCCAGAGGTAAATCAGCATT

Downstream 100 bases:

>100_bases
GCACCAGGTGCATGGCGCAACGTCGCTCGCCGGGCAATCCGTGAGCGATTTCATCGCGCAATACTTGGTTCAGACGCTCG
TCGCTGTCGTCGGCGTTCAA

Product: LysR family transcriptional regulator

Products: NA

Alternate protein names: Transcriptional Regulator LysR Family; Transcriptional Regulator; Transcriptional Regulator LysR Family Protein; Transcriptional Regulator LysR; LysR Family Regulatory Protein; Transcriptional Regulator Of LysR Family Protein; Transcriptional Regulator Lysr Family; LysR Family Transcription Regulator Protein; Transcriptional Regulator Protein; Transcription Regulatory Protein Ytli; Transcriptional Regulator Transcription Regulator Protein

Number of amino acids: Translated: 321; Mature: 321

Protein sequence:

>321_residues
METPLSNSGNPPVKTAHRAPLALSGLDFKLLKVFKAVVEAGGFSAAQNELNVGLAAISKQISDLEIRIGMRLCTRGREGF
HLTEEGRLVYQASIDLFASVDNFRDRLSSAQNELIGDLGVGVIDNTISDDNSPLVAALRKINEHSPKVRFQLQSTQLDEV
ERGVVEGRLVAGIVPVYQKREEFDYYPLYEERSQAYCAVGHPLFEMPAEQMGGNVLQDYECINHRYAIHRDKLNFARYDS
FSASATQVEAVALLIKTGRFVGFLPQHYAAALVAAGQFRAVCPELIHFDTPFNLILRHNTVRSPLVKAFAQALGVDLKAT
A

Sequences:

>Translated_321_residues
METPLSNSGNPPVKTAHRAPLALSGLDFKLLKVFKAVVEAGGFSAAQNELNVGLAAISKQISDLEIRIGMRLCTRGREGF
HLTEEGRLVYQASIDLFASVDNFRDRLSSAQNELIGDLGVGVIDNTISDDNSPLVAALRKINEHSPKVRFQLQSTQLDEV
ERGVVEGRLVAGIVPVYQKREEFDYYPLYEERSQAYCAVGHPLFEMPAEQMGGNVLQDYECINHRYAIHRDKLNFARYDS
FSASATQVEAVALLIKTGRFVGFLPQHYAAALVAAGQFRAVCPELIHFDTPFNLILRHNTVRSPLVKAFAQALGVDLKAT
A
>Mature_321_residues
METPLSNSGNPPVKTAHRAPLALSGLDFKLLKVFKAVVEAGGFSAAQNELNVGLAAISKQISDLEIRIGMRLCTRGREGF
HLTEEGRLVYQASIDLFASVDNFRDRLSSAQNELIGDLGVGVIDNTISDDNSPLVAALRKINEHSPKVRFQLQSTQLDEV
ERGVVEGRLVAGIVPVYQKREEFDYYPLYEERSQAYCAVGHPLFEMPAEQMGGNVLQDYECINHRYAIHRDKLNFARYDS
FSASATQVEAVALLIKTGRFVGFLPQHYAAALVAAGQFRAVCPELIHFDTPFNLILRHNTVRSPLVKAFAQALGVDLKAT
A

Specific function: Unknown

COG id: COG0583

COG function: function code K; Transcriptional regulator

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 35418; Mature: 35418

Theoretical pI: Translated: 6.60; Mature: 6.60

Prosite motif: PS50931 HTH_LYSR

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
METPLSNSGNPPVKTAHRAPLALSGLDFKLLKVFKAVVEAGGFSAAQNELNVGLAAISKQ
CCCCCCCCCCCCCCCCCCCCEEECCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH
ISDLEIRIGMRLCTRGREGFHLTEEGRLVYQASIDLFASVDNFRDRLSSAQNELIGDLGV
HHHHHHHHHHHHHHCCCCCCEECCCCCEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHCC
GVIDNTISDDNSPLVAALRKINEHSPKVRFQLQSTQLDEVERGVVEGRLVAGIVPVYQKR
CHHCCCCCCCCCHHHHHHHHHHCCCCCEEEEECCCCHHHHHHHHHCCHHHHHHHHHHHHH
EEFDYYPLYEERSQAYCAVGHPLFEMPAEQMGGNVLQDYECINHRYAIHRDKLNFARYDS
HCCCCCCCHHHCCCEEEEECCCHHHCCHHHHCCCHHHHHHHHHCHHEEECCCCCHHHCCC
FSASATQVEAVALLIKTGRFVGFLPQHYAAALVAAGQFRAVCPELIHFDTPFNLILRHNT
CCCCHHHHHHHHHHHHHCCCEEECHHHHHHHHHHCCHHHHHHHHHHCCCCCCEEEEECCC
VRSPLVKAFAQALGVDLKATA
HHHHHHHHHHHHHCCCCCCCC
>Mature Secondary Structure
METPLSNSGNPPVKTAHRAPLALSGLDFKLLKVFKAVVEAGGFSAAQNELNVGLAAISKQ
CCCCCCCCCCCCCCCCCCCCEEECCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH
ISDLEIRIGMRLCTRGREGFHLTEEGRLVYQASIDLFASVDNFRDRLSSAQNELIGDLGV
HHHHHHHHHHHHHHCCCCCCEECCCCCEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHCC
GVIDNTISDDNSPLVAALRKINEHSPKVRFQLQSTQLDEVERGVVEGRLVAGIVPVYQKR
CHHCCCCCCCCCHHHHHHHHHHCCCCCEEEEECCCCHHHHHHHHHCCHHHHHHHHHHHHH
EEFDYYPLYEERSQAYCAVGHPLFEMPAEQMGGNVLQDYECINHRYAIHRDKLNFARYDS
HCCCCCCCHHHCCCEEEEECCCHHHCCHHHHCCCHHHHHHHHHCHHEEECCCCCHHHCCC
FSASATQVEAVALLIKTGRFVGFLPQHYAAALVAAGQFRAVCPELIHFDTPFNLILRHNT
CCCCHHHHHHHHHHHHHCCCEEECHHHHHHHHHHCCHHHHHHHHHHCCCCCCEEEEECCC
VRSPLVKAFAQALGVDLKATA
HHHHHHHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA