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The map label for this gene is xerC [H]

Identifier: 77459065

GI number: 77459065

Start: 3276556

End: 3277446

Strand: Reverse

Name: xerC [H]

Synonym: Pfl01_2840

Alternate gene names: 77459065

Gene position: 3277446-3276556 (Counterclockwise)

Preceding gene: 77459076

Following gene: 77459058

Centisome position: 50.9

GC content: 57.01

Gene sequence:

>891_bases
ATGACCGTGTATCTGGCGCGTCTGGCTCCCTCCAGCCAACTCACCATGCGTTACGTTTTACAAGATGCCGCCGACCGTCT
CGGTTTCGAAGACATGAACGTCGAAGAAATTCCCTGGCATGCGCTGCAACCGGAAGATGTGGTTGCATTAGTCGCTGCAT
TGCGCGCCGACAATTACGCACCGAATACTTCTTCGCTGTATGTAAACGCCATTCGCGGTGTAATGAATGAAGCCTGGCGC
ATGAGCCTGATCAGCCAGGAACATCTATTGAAAATGCGCTCGGTCAAAGGCATTGCCGGCACACGACTGTCTCAGGGGCG
CAATTTGAAGCGCACGCTGATTCATGAATTGATGGAAGTCTGCGCCGCTGATCCACGGCCACAAGGTTTGCGCGATGCGG
CGGTGATTGCGCTGTTGTACGGCACTGGCATGCGCAAGTCGGAGTCGGTGGATCTGGATCTCAATCAGGTCGATTTCAAC
GAGCGCAGTCTGTGCGTGACTGCCAAGGGCAATAAACAACTGATCAAATACGCGCCAGCCTGGGCGTTCGCCAAACTCAA
TGCCTGGCTGGAGTTTCGTCGCTCGGAACTCAAGGAAGGCGAGAGCGACGACGCGTTTCTGTTCAACCGCATCCGCCGTG
GCAGCCATATCACCCGCGAGCGCATCACCAAGCACGCGATCTATTACATCGCCCGCCAGCGCGGCACCCAGGTCGGGGTG
AAGATCATGCCCCATGATTTCCGCCGTTCGTTCATCACCCGGGTGATCGAAGAACACGACCTGTCGATTGCCCAGAAGCT
GGCCCACCACAGCAATATCCAGACAACCGCCAACTACGACGTGCGCGACGACAACGAGCGTCGCCGCGCGGTGGATCGCT
TCGACCTGTAG

Upstream 100 bases:

>100_bases
TGTTGCAGTTGTTAGTTGCTGTGTTGAACTGTTTTTACTCAAGGCCCGACGTTTGATTGACTTACCCGTTGCATCCCCCG
AACCCCTGAAAACCAACCCG

Downstream 100 bases:

>100_bases
TCAGGGCGTTGCAAAGACGTGGGCCGCCCCCAGAATGGACAACTGCACGGCGCTGCCGGCCGGTGGCGCGTGCATGCCGG
AGCTGCGCACCAGCAGTGAG

Product: Phage integrase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 296; Mature: 295

Protein sequence:

>296_residues
MTVYLARLAPSSQLTMRYVLQDAADRLGFEDMNVEEIPWHALQPEDVVALVAALRADNYAPNTSSLYVNAIRGVMNEAWR
MSLISQEHLLKMRSVKGIAGTRLSQGRNLKRTLIHELMEVCAADPRPQGLRDAAVIALLYGTGMRKSESVDLDLNQVDFN
ERSLCVTAKGNKQLIKYAPAWAFAKLNAWLEFRRSELKEGESDDAFLFNRIRRGSHITRERITKHAIYYIARQRGTQVGV
KIMPHDFRRSFITRVIEEHDLSIAQKLAHHSNIQTTANYDVRDDNERRRAVDRFDL

Sequences:

>Translated_296_residues
MTVYLARLAPSSQLTMRYVLQDAADRLGFEDMNVEEIPWHALQPEDVVALVAALRADNYAPNTSSLYVNAIRGVMNEAWR
MSLISQEHLLKMRSVKGIAGTRLSQGRNLKRTLIHELMEVCAADPRPQGLRDAAVIALLYGTGMRKSESVDLDLNQVDFN
ERSLCVTAKGNKQLIKYAPAWAFAKLNAWLEFRRSELKEGESDDAFLFNRIRRGSHITRERITKHAIYYIARQRGTQVGV
KIMPHDFRRSFITRVIEEHDLSIAQKLAHHSNIQTTANYDVRDDNERRRAVDRFDL
>Mature_295_residues
TVYLARLAPSSQLTMRYVLQDAADRLGFEDMNVEEIPWHALQPEDVVALVAALRADNYAPNTSSLYVNAIRGVMNEAWRM
SLISQEHLLKMRSVKGIAGTRLSQGRNLKRTLIHELMEVCAADPRPQGLRDAAVIALLYGTGMRKSESVDLDLNQVDFNE
RSLCVTAKGNKQLIKYAPAWAFAKLNAWLEFRRSELKEGESDDAFLFNRIRRGSHITRERITKHAIYYIARQRGTQVGVK
IMPHDFRRSFITRVIEEHDLSIAQKLAHHSNIQTTANYDVRDDNERRRAVDRFDL

Specific function: Site-specific tyrosine recombinase, which acts by catalyzing the cutting and rejoining of the recombining DNA molecules. The xerC-xerD complex is essential to convert dimers of the bacterial chromosome into monomers to permit their segregation at cell div

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the 'phage' integrase family. XerC subfamily [H]

Homologues:

Organism=Escherichia coli, GI1789261, Length=240, Percent_Identity=27.9166666666667, Blast_Score=72, Evalue=6e-14,
Organism=Escherichia coli, GI1790244, Length=222, Percent_Identity=27.9279279279279, Blast_Score=72, Evalue=6e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011010
- InterPro:   IPR013762
- InterPro:   IPR002104
- InterPro:   IPR010998
- InterPro:   IPR023109
- InterPro:   IPR004107
- InterPro:   IPR011931 [H]

Pfam domain/function: PF02899 Phage_integr_N; PF00589 Phage_integrase [H]

EC number: NA

Molecular weight: Translated: 33922; Mature: 33791

Theoretical pI: Translated: 9.65; Mature: 9.65

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTVYLARLAPSSQLTMRYVLQDAADRLGFEDMNVEEIPWHALQPEDVVALVAALRADNYA
CEEEEEECCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCC
PNTSSLYVNAIRGVMNEAWRMSLISQEHLLKMRSVKGIAGTRLSQGRNLKRTLIHELMEV
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHCCCCHHHHHHHHHHHH
CAADPRPQGLRDAAVIALLYGTGMRKSESVDLDLNQVDFNERSLCVTAKGNKQLIKYAPA
HCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCEECCCCCEEEEEECCCCEEEEECCH
WAFAKLNAWLEFRRSELKEGESDDAFLFNRIRRGSHITRERITKHAIYYIARQRGTQVGV
HHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCEECE
KIMPHDFRRSFITRVIEEHDLSIAQKLAHHSNIQTTANYDVRDDNERRRAVDRFDL
EECCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHCCC
>Mature Secondary Structure 
TVYLARLAPSSQLTMRYVLQDAADRLGFEDMNVEEIPWHALQPEDVVALVAALRADNYA
EEEEEECCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCC
PNTSSLYVNAIRGVMNEAWRMSLISQEHLLKMRSVKGIAGTRLSQGRNLKRTLIHELMEV
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHCCCCHHHHHHHHHHHH
CAADPRPQGLRDAAVIALLYGTGMRKSESVDLDLNQVDFNERSLCVTAKGNKQLIKYAPA
HCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCEECCCCCEEEEEECCCCEEEEECCH
WAFAKLNAWLEFRRSELKEGESDDAFLFNRIRRGSHITRERITKHAIYYIARQRGTQVGV
HHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCEECE
KIMPHDFRRSFITRVIEEHDLSIAQKLAHHSNIQTTANYDVRDDNERRRAVDRFDL
EECCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA