| Definition | Pseudomonas fluorescens Pf0-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007492 |
| Length | 6,438,405 |
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The map label for this gene is 77458797
Identifier: 77458797
GI number: 77458797
Start: 2948652
End: 2949182
Strand: Reverse
Name: 77458797
Synonym: Pfl01_2572
Alternate gene names: NA
Gene position: 2949182-2948652 (Counterclockwise)
Preceding gene: 77458798
Following gene: 77458795
Centisome position: 45.81
GC content: 61.21
Gene sequence:
>531_bases ATGAAAAAAGGGCTGATACCGGCGACGGTTCAGCCCTTTTTCAATGAGAGAGCATCAATGCGCCGTATCCAAGCCGTCAT CCTGTCCCTGCTTCTGCTCTCCCTCAGCGCCTGCGCGCTGTTCCCCAACCGCGACCCGGTGAACATCAACGTGGTCGGCC TCGAACCGCTGCCGAGCCAGGATCTGGAAGTGCGCTTCGCGATCAAGCTGCGCGTGCAGAACCCCAACGAAACGCCCATC GACTACAACGGCATCGCGCTGGATCTGGAGGTCAACGGCCACTCGCTGGCGTCGGGTGTGAGCGATCAGAGCGGCTCGAT TCCACGGTTTTCCGAAACCATTGTCAGCGTCCCGGTGAGCATTTCCGCGTTCTCGGTGCTGCGCCAGACCCTCGGCCTGA GCCAGACCCAAACCCTCGACAACCTGCCCTATGTACTGCGCGGCAAACTGGCGGGCGGGTTGTTTGGCACGATGCGCTTT GTCGATACCGGCAAGCTCAGTCTGCCCAGGGCCAGTGCTGCCACCTGGTAA
Upstream 100 bases:
>100_bases TCTATCCTTCAGGTCATGGAAAACCCCGACCTGCCGGCCAAAGCTGAACCCGCAACCAAGGCCGCTGTCGCACAGTTGAA CCGTTGATCCTGTCCGCTCG
Downstream 100 bases:
>100_bases ACCGCACCGTCGTCAAGTGGTGAAACGTACACCGGGTTTAGCCCGCTCATCGACGCTCAGCTCGAACACATCGGGCCGTG CATAGTGGCCGACCACGTCG
Product: putative lipoprotein
Products: NA
Alternate protein names: Water Stress And Hypersensitive Response Domain Protein; Water Stress/Hypersensitive Response Protein
Number of amino acids: Translated: 176; Mature: 176
Protein sequence:
>176_residues MKKGLIPATVQPFFNERASMRRIQAVILSLLLLSLSACALFPNRDPVNINVVGLEPLPSQDLEVRFAIKLRVQNPNETPI DYNGIALDLEVNGHSLASGVSDQSGSIPRFSETIVSVPVSISAFSVLRQTLGLSQTQTLDNLPYVLRGKLAGGLFGTMRF VDTGKLSLPRASAATW
Sequences:
>Translated_176_residues MKKGLIPATVQPFFNERASMRRIQAVILSLLLLSLSACALFPNRDPVNINVVGLEPLPSQDLEVRFAIKLRVQNPNETPI DYNGIALDLEVNGHSLASGVSDQSGSIPRFSETIVSVPVSISAFSVLRQTLGLSQTQTLDNLPYVLRGKLAGGLFGTMRF VDTGKLSLPRASAATW >Mature_176_residues MKKGLIPATVQPFFNERASMRRIQAVILSLLLLSLSACALFPNRDPVNINVVGLEPLPSQDLEVRFAIKLRVQNPNETPI DYNGIALDLEVNGHSLASGVSDQSGSIPRFSETIVSVPVSISAFSVLRQTLGLSQTQTLDNLPYVLRGKLAGGLFGTMRF VDTGKLSLPRASAATW
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19032; Mature: 19032
Theoretical pI: Translated: 9.79; Mature: 9.79
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKGLIPATVQPFFNERASMRRIQAVILSLLLLSLSACALFPNRDPVNINVVGLEPLPSQ CCCCCCCCHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCCCC DLEVRFAIKLRVQNPNETPIDYNGIALDLEVNGHSLASGVSDQSGSIPRFSETIVSVPVS CCEEEEEEEEEEECCCCCCCCCCCEEEEEEECCCHHHCCCCCCCCCCCCHHHHHHCCCCC ISAFSVLRQTLGLSQTQTLDNLPYVLRGKLAGGLFGTMRFVDTGKLSLPRASAATW HHHHHHHHHHHCCCCHHHHHCCCCEEEHHHCCCHHHHHEEEECCCCCCCCCCCCCC >Mature Secondary Structure MKKGLIPATVQPFFNERASMRRIQAVILSLLLLSLSACALFPNRDPVNINVVGLEPLPSQ CCCCCCCCHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCCCC DLEVRFAIKLRVQNPNETPIDYNGIALDLEVNGHSLASGVSDQSGSIPRFSETIVSVPVS CCEEEEEEEEEEECCCCCCCCCCCEEEEEEECCCHHHCCCCCCCCCCCCHHHHHHCCCCC ISAFSVLRQTLGLSQTQTLDNLPYVLRGKLAGGLFGTMRFVDTGKLSLPRASAATW HHHHHHHHHHHCCCCHHHHHCCCCEEEHHHCCCHHHHHEEEECCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA