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The map label for this gene is nahR [H]

Identifier: 77458795

GI number: 77458795

Start: 2946717

End: 2947631

Strand: Reverse

Name: nahR [H]

Synonym: Pfl01_2570

Alternate gene names: 77458795

Gene position: 2947631-2946717 (Counterclockwise)

Preceding gene: 77458797

Following gene: 77458793

Centisome position: 45.78

GC content: 64.26

Gene sequence:

>915_bases
ATGAGCCAAATGAATATCGCAACCGTTGACCTCAACCTGCTGAAAGTCTTCGAAGCCCTGCATGAAGAGTCCAGTGCCAG
CCGCGCGGCGTTGCGTCTGGGCGTGACCCAGTCGGCGGTCAGCGCGGCTCTGCGTCGGTTGCGCGAGGTGTATGGCGATC
AATTGTTCGTGCGTACCGGACGGGGTTTGGCCCCGACGCTCAAGGCAAACCAGTTGAAACCGGTGGTCAGCGATGCGCTG
AACAAATGTCGGCAAAGCCTGGCCATGGTCGACCCGACTGCCAATCACTACGACGGACGCTCGGTTACTGTGGGCCTCTC
GGACGACTTCGAGATCGCTTACGGGCGGCGGCTGATCGAGGAAATCGCCCGCCGCGCGCCGAAACTGCGGCTGATCTTTC
GCCAGACCCACAGTCAGATCGTCGCCCGGGCGCTGATGGAGCGCAGCATCGATCTGGCAATCACCGCCGGCGGGTTCGCC
GAACGGCTGCTCAGCCGTCAGGTGTTGGGTGAAGGGGGTTATGCGTGTCTGGTGGATCCGGCGAGCCTGGCGTCGGGCCA
GCAGCAGATCGATCTGGAGGAGTTCGTCACTCGCGAGCACCTGCTGGTGTCGTCGGGCGGTTTTATCGGGATCACCGATG
AAGGGCTGGCAGCGCTGGGCCGGACTCGCCGGGTCTGCGCCTCAACCACGCATTTCGCCGCGTTGCCGCACCTGCTCAAG
GGCAGCGATGCGGTGGCGACCATTCCGACCCACGCCGCGCAGGCCATTGCTTCAATGAGCGGGCTGGCGCTGCTGCCCTG
CCCGCTGGCGCTGCCGCGCTACCCGATCGAACTGGGCTGGCGCACCAGCACCCAGATCGATCCGGTGGTACTGACGGTGC
GCGAAGCGATAGGCGCCAGTTTCAGAACTGAGTGA

Upstream 100 bases:

>100_bases
CGATTGATTTGGGCATGGCGGTCACTCCGTGAAGTTCAGGTGTTGCTGATTCTCCGACGCCACGGGATCATGAATAAAGA
CCGATCCACTGCTGAATGAT

Downstream 100 bases:

>100_bases
TTACTTGTTGGCCGCCATCAGGCGATTGACTTCACTGCGCACCATGTTGGCGAATTCCGGCGGCGACATGCCGTCCAGTT
CGGCGCGCACGAATTCGGCC

Product: LysR family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 304; Mature: 303

Protein sequence:

>304_residues
MSQMNIATVDLNLLKVFEALHEESSASRAALRLGVTQSAVSAALRRLREVYGDQLFVRTGRGLAPTLKANQLKPVVSDAL
NKCRQSLAMVDPTANHYDGRSVTVGLSDDFEIAYGRRLIEEIARRAPKLRLIFRQTHSQIVARALMERSIDLAITAGGFA
ERLLSRQVLGEGGYACLVDPASLASGQQQIDLEEFVTREHLLVSSGGFIGITDEGLAALGRTRRVCASTTHFAALPHLLK
GSDAVATIPTHAAQAIASMSGLALLPCPLALPRYPIELGWRTSTQIDPVVLTVREAIGASFRTE

Sequences:

>Translated_304_residues
MSQMNIATVDLNLLKVFEALHEESSASRAALRLGVTQSAVSAALRRLREVYGDQLFVRTGRGLAPTLKANQLKPVVSDAL
NKCRQSLAMVDPTANHYDGRSVTVGLSDDFEIAYGRRLIEEIARRAPKLRLIFRQTHSQIVARALMERSIDLAITAGGFA
ERLLSRQVLGEGGYACLVDPASLASGQQQIDLEEFVTREHLLVSSGGFIGITDEGLAALGRTRRVCASTTHFAALPHLLK
GSDAVATIPTHAAQAIASMSGLALLPCPLALPRYPIELGWRTSTQIDPVVLTVREAIGASFRTE
>Mature_303_residues
SQMNIATVDLNLLKVFEALHEESSASRAALRLGVTQSAVSAALRRLREVYGDQLFVRTGRGLAPTLKANQLKPVVSDALN
KCRQSLAMVDPTANHYDGRSVTVGLSDDFEIAYGRRLIEEIARRAPKLRLIFRQTHSQIVARALMERSIDLAITAGGFAE
RLLSRQVLGEGGYACLVDPASLASGQQQIDLEEFVTREHLLVSSGGFIGITDEGLAALGRTRRVCASTTHFAALPHLLKG
SDAVATIPTHAAQAIASMSGLALLPCPLALPRYPIELGWRTSTQIDPVVLTVREAIGASFRTE

Specific function: Regulates the expression of the naphthalene (nahA-F) and salicylate (nahG-M) metabolism genes [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH lysR-type DNA-binding domain [H]

Homologues:

Organism=Escherichia coli, GI87081684, Length=283, Percent_Identity=24.3816254416961, Blast_Score=81, Evalue=9e-17,
Organism=Escherichia coli, GI87081766, Length=299, Percent_Identity=24.0802675585284, Blast_Score=69, Evalue=4e-13,
Organism=Escherichia coli, GI1786820, Length=115, Percent_Identity=35.6521739130435, Blast_Score=68, Evalue=9e-13,

Paralogues:

None

Copy number: 825 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000847
- InterPro:   IPR005119
- InterPro:   IPR011991 [H]

Pfam domain/function: PF00126 HTH_1; PF03466 LysR_substrate [H]

EC number: NA

Molecular weight: Translated: 32822; Mature: 32691

Theoretical pI: Translated: 8.64; Mature: 8.64

Prosite motif: PS50931 HTH_LYSR

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSQMNIATVDLNLLKVFEALHEESSASRAALRLGVTQSAVSAALRRLREVYGDQLFVRTG
CCCCEEEEEHHHHHHHHHHHHHHCCHHHHHHHHCCHHHHHHHHHHHHHHHHCCEEEEECC
RGLAPTLKANQLKPVVSDALNKCRQSLAMVDPTANHYDGRSVTVGLSDDFEIAYGRRLIE
CCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEECCCCCHHHHHHHHHH
EIARRAPKLRLIFRQTHSQIVARALMERSIDLAITAGGFAERLLSRQVLGEGGYACLVDP
HHHHHCCCEEHHHHHHHHHHHHHHHHHCCCCEEEECCHHHHHHHHHHHHCCCCCEEEECH
ASLASGQQQIDLEEFVTREHLLVSSGGFIGITDEGLAALGRTRRVCASTTHFAALPHLLK
HHHCCCCCCCCHHHHHHHHHEEEECCCEEEECCHHHHHHHHHHHHHHCCHHHHHHHHHHC
GSDAVATIPTHAAQAIASMSGLALLPCPLALPRYPIELGWRTSTQIDPVVLTVREAIGAS
CCCCEEECCHHHHHHHHHHCCCEEECCCCCCCCCCEEECCCCCCCCCHHHHHHHHHHCCC
FRTE
CCCC
>Mature Secondary Structure 
SQMNIATVDLNLLKVFEALHEESSASRAALRLGVTQSAVSAALRRLREVYGDQLFVRTG
CCCEEEEEHHHHHHHHHHHHHHCCHHHHHHHHCCHHHHHHHHHHHHHHHHCCEEEEECC
RGLAPTLKANQLKPVVSDALNKCRQSLAMVDPTANHYDGRSVTVGLSDDFEIAYGRRLIE
CCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEECCCCCHHHHHHHHHH
EIARRAPKLRLIFRQTHSQIVARALMERSIDLAITAGGFAERLLSRQVLGEGGYACLVDP
HHHHHCCCEEHHHHHHHHHHHHHHHHHCCCCEEEECCHHHHHHHHHHHHCCCCCEEEECH
ASLASGQQQIDLEEFVTREHLLVSSGGFIGITDEGLAALGRTRRVCASTTHFAALPHLLK
HHHCCCCCCCCHHHHHHHHHEEEECCCEEEECCHHHHHHHHHHHHHHCCHHHHHHHHHHC
GSDAVATIPTHAAQAIASMSGLALLPCPLALPRYPIELGWRTSTQIDPVVLTVREAIGAS
CCCCEEECCHHHHHHHHHHCCCEEECCCCCCCCCCEEECCCCCCCCCHHHHHHHHHHCCC
FRTE
CCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 2703465; 2848005 [H]