| Definition | Pseudomonas fluorescens Pf0-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007492 |
| Length | 6,438,405 |
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The map label for this gene is iorB [H]
Identifier: 77458671
GI number: 77458671
Start: 2798070
End: 2800307
Strand: Reverse
Name: iorB [H]
Synonym: Pfl01_2446
Alternate gene names: 77458671
Gene position: 2800307-2798070 (Counterclockwise)
Preceding gene: 77458672
Following gene: 77458670
Centisome position: 43.49
GC content: 65.64
Gene sequence:
>2238_bases ATGACGACGATCAATGAGGTCGATCACAGTCGCCGTGCGTTCCTGCGCGGGGGCGCTCTGCTGGTAGCGTTTGCTTTGGT GCCGGTCTCGCGCCGCGCCCTGGCTGACACCGAAGTCGACACTTTGGGCACTGTCGTGCTGGCGCCGGACCTGCCCGGCA GCCTGCGCACCAACCCTTGGCTCGATGCGTGGATCCGCGTCGGCCCCGACGGCATCACCGTCTACACCGGCAAGGTCGAA CTGGGCACCGGGGTCAAAACCGCGTTGCTGCAAATTGCCGCTGAACGGCTGGAGGTCTCCCCGACAGCGATCAACCTGCT CACCGCCGACACCGCACTGACGCCGAACGAAGGCTACACCGCCGGCAGCCACACGATTTTCGACAGCGGCACCGCGCTGT TCAACGCGGCGGCACAAGTGCGCGAGATGCTGCTCGAATCGGCCGGGCGCAGCTGGAACGTTGCGCCGGCACTGCTGACG ACTCGCGACGGCAGCATTCTCGGCCCGACCGGCCAACGCATGTCCTACGCCGACGCCGTCCGGGATGTGGATCTGCACCG CTATGCAACGTCCGAGTCACCCTCGATGCCGCCGGCGTCATTCAAGCTCATCGGCCATTCGCTGCCACGCCTGGACATTC CGGGCAAAGTCAGCGGCGGCGCCGCGTTCGTGCAGGACATTCGCCTGCCGGGCATGCTCCATGCCCGGGTCATCCGCCCG CCGCGTCCCGGCTGCACGCTGGACGCCATCGATATTGAATCGATCAAGGCGCTGTCCGGGGTGGTGCAGGTGATTCGCGA CGGCAATTATCTGGCCGTGGTCGCGCGGGACGAATGGCAAGCGATCAAAGCCATGCGTCATGGATACGCCTCGGCGCGCT GGAGCGGCGGACAGGCGATTCCCGAATCGCGCGACATCCATGCGCTCCTCAAGCGCCTGCCCTCGCGTCGTTATCCGATT AGCCATGAAGGCACCCCACAAGGCGCGACCGACAACGAATATCGCGCCCGGGTGACCAAGCAATACCTGATGCACGGTTC GATCGGTCCGTCCTGCGCCGTGGCCTGGTTCAAGGACGGCACCCTCAACGTCTGGACCCACACCCAGGGCGTGTATCCGC TGCGTGCCGGGATCGCCGAAATGCTGCGGTTGCCGCCCGAGCGCGTGCGCTGCATCCACACCGAAGGTTCCGGCTGTTAC GGCCATAACGGCGCGGACGATGCAGCAGCCGACGCGGCGTTGATTGCCATGCGCGTGCCGGGCACGCCGGTGCGGGTGCA ATGGATGCGCGAGCAGGAAAACCTTTGGGAGCCGTACAGCTCGGCGATGGTCACCGAAGTGCAAGCCAACCTTGACGCAC AGGGTCGGCTGCAGGACTGGAACTATGAGCTGTGGACCACGCCGCACAACGAACGCATCGTCAACGCCGGGCGCTTGCTG CCCGCACGCCTGCTGGCCCGGCCGTTCGCCTCCGCACCTTCGGTGCCGATCGCTCAGCCCGAAGGCGACGGCGATCGCAA CGCGGTGCCGCTGTACACCGTGGCCTCTTCGCGGATCGACATGAACTTCGTCACCGAAATGCCGTTCCGCACCTCGGCCA TGCGCTCGCTGGGCGCCCACATCAACGTCTTCGCCATCGAAGCCTGCATCGACGAGCTGGCCGCCAAGGCCGGACTGGAT CCGGTTGCCCTGCGCCTGGCGCACCTGACCGATCCTCGGGCACGGGCTGTTGTGGAAAAGGTTCGCGATGCCGTCGGCTG GCCGCAAAAAAGCAGTGAACCCGGCGCAGGCCTTGGCTTCGCCTTCGCGCGTTACAAAAACATCATGGGTTACTGCGCCA TTGCCGTGCGTTTGCGGGTGCATCCGCAGACCGGCGAAGTGCAGATCGATCACGTCGTGACCGCAGTGGACGTGGGCCAG ATCGTCAGTCCCGATGGCCTGCGTAACCAGGTCGAGGGCGGGATCGTGCAGTCCACCAGCTGGACGCTGTATGAAAAGGT CGCCTATGACGCCGGTGGCATCCGCAGCTACGACTGGAGCGGCTACCCGATCCTGCGCTTCTCGCAAGTACCCAAAAAGG TCGACGTTCACCTGCTCGACCAGCCGGGGCAACCGTTTCTGGGGGCCGCCGAAATCGTCCAGGGCCCCATGGCGGCCGCC ATCGGCAACGCCGTGGCGAATGCCACCGGCCGGCGTTGGCTCAACCTTCCGCTGACCCGCTCGCAACAGCCTTCCTGA
Upstream 100 bases:
>100_bases CCATTCGCGAACACATGTCCGTCAACCTCTGCCGCTGCGGCACGCACTTGCGCATCATCGAGGCGATCAACCTTGTCGCC CGGCAAAACGGGAGCGCGCT
Downstream 100 bases:
>100_bases ACTGCGCCACGTTGCATTTCACGCAATGCAGCGTGGCGTCGCGTGTGGATTATCAAGCACCGGACAGCCGCTTAACGTAG GGCCATCCGGTGTCGGGCCA
Product: twin-arginine translocation pathway signal protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 745; Mature: 744
Protein sequence:
>745_residues MTTINEVDHSRRAFLRGGALLVAFALVPVSRRALADTEVDTLGTVVLAPDLPGSLRTNPWLDAWIRVGPDGITVYTGKVE LGTGVKTALLQIAAERLEVSPTAINLLTADTALTPNEGYTAGSHTIFDSGTALFNAAAQVREMLLESAGRSWNVAPALLT TRDGSILGPTGQRMSYADAVRDVDLHRYATSESPSMPPASFKLIGHSLPRLDIPGKVSGGAAFVQDIRLPGMLHARVIRP PRPGCTLDAIDIESIKALSGVVQVIRDGNYLAVVARDEWQAIKAMRHGYASARWSGGQAIPESRDIHALLKRLPSRRYPI SHEGTPQGATDNEYRARVTKQYLMHGSIGPSCAVAWFKDGTLNVWTHTQGVYPLRAGIAEMLRLPPERVRCIHTEGSGCY GHNGADDAAADAALIAMRVPGTPVRVQWMREQENLWEPYSSAMVTEVQANLDAQGRLQDWNYELWTTPHNERIVNAGRLL PARLLARPFASAPSVPIAQPEGDGDRNAVPLYTVASSRIDMNFVTEMPFRTSAMRSLGAHINVFAIEACIDELAAKAGLD PVALRLAHLTDPRARAVVEKVRDAVGWPQKSSEPGAGLGFAFARYKNIMGYCAIAVRLRVHPQTGEVQIDHVVTAVDVGQ IVSPDGLRNQVEGGIVQSTSWTLYEKVAYDAGGIRSYDWSGYPILRFSQVPKKVDVHLLDQPGQPFLGAAEIVQGPMAAA IGNAVANATGRRWLNLPLTRSQQPS
Sequences:
>Translated_745_residues MTTINEVDHSRRAFLRGGALLVAFALVPVSRRALADTEVDTLGTVVLAPDLPGSLRTNPWLDAWIRVGPDGITVYTGKVE LGTGVKTALLQIAAERLEVSPTAINLLTADTALTPNEGYTAGSHTIFDSGTALFNAAAQVREMLLESAGRSWNVAPALLT TRDGSILGPTGQRMSYADAVRDVDLHRYATSESPSMPPASFKLIGHSLPRLDIPGKVSGGAAFVQDIRLPGMLHARVIRP PRPGCTLDAIDIESIKALSGVVQVIRDGNYLAVVARDEWQAIKAMRHGYASARWSGGQAIPESRDIHALLKRLPSRRYPI SHEGTPQGATDNEYRARVTKQYLMHGSIGPSCAVAWFKDGTLNVWTHTQGVYPLRAGIAEMLRLPPERVRCIHTEGSGCY GHNGADDAAADAALIAMRVPGTPVRVQWMREQENLWEPYSSAMVTEVQANLDAQGRLQDWNYELWTTPHNERIVNAGRLL PARLLARPFASAPSVPIAQPEGDGDRNAVPLYTVASSRIDMNFVTEMPFRTSAMRSLGAHINVFAIEACIDELAAKAGLD PVALRLAHLTDPRARAVVEKVRDAVGWPQKSSEPGAGLGFAFARYKNIMGYCAIAVRLRVHPQTGEVQIDHVVTAVDVGQ IVSPDGLRNQVEGGIVQSTSWTLYEKVAYDAGGIRSYDWSGYPILRFSQVPKKVDVHLLDQPGQPFLGAAEIVQGPMAAA IGNAVANATGRRWLNLPLTRSQQPS >Mature_744_residues TTINEVDHSRRAFLRGGALLVAFALVPVSRRALADTEVDTLGTVVLAPDLPGSLRTNPWLDAWIRVGPDGITVYTGKVEL GTGVKTALLQIAAERLEVSPTAINLLTADTALTPNEGYTAGSHTIFDSGTALFNAAAQVREMLLESAGRSWNVAPALLTT RDGSILGPTGQRMSYADAVRDVDLHRYATSESPSMPPASFKLIGHSLPRLDIPGKVSGGAAFVQDIRLPGMLHARVIRPP RPGCTLDAIDIESIKALSGVVQVIRDGNYLAVVARDEWQAIKAMRHGYASARWSGGQAIPESRDIHALLKRLPSRRYPIS HEGTPQGATDNEYRARVTKQYLMHGSIGPSCAVAWFKDGTLNVWTHTQGVYPLRAGIAEMLRLPPERVRCIHTEGSGCYG HNGADDAAADAALIAMRVPGTPVRVQWMREQENLWEPYSSAMVTEVQANLDAQGRLQDWNYELWTTPHNERIVNAGRLLP ARLLARPFASAPSVPIAQPEGDGDRNAVPLYTVASSRIDMNFVTEMPFRTSAMRSLGAHINVFAIEACIDELAAKAGLDP VALRLAHLTDPRARAVVEKVRDAVGWPQKSSEPGAGLGFAFARYKNIMGYCAIAVRLRVHPQTGEVQIDHVVTAVDVGQI VSPDGLRNQVEGGIVQSTSWTLYEKVAYDAGGIRSYDWSGYPILRFSQVPKKVDVHLLDQPGQPFLGAAEIVQGPMAAAI GNAVANATGRRWLNLPLTRSQQPS
Specific function: Specific towards N-containing N-heterocyclic substrates, including isoquinoline, isoquinolin-5-ol, phthalazine and quinazoline [H]
COG id: COG1529
COG function: function code C; Aerobic-type carbon monoxide dehydrogenase, large subunit CoxL/CutL homologs
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000674 - InterPro: IPR008274 - InterPro: IPR012368 - InterPro: IPR006311 [H]
Pfam domain/function: PF02738 Ald_Xan_dh_C2 [H]
EC number: =1.3.99.16 [H]
Molecular weight: Translated: 80682; Mature: 80551
Theoretical pI: Translated: 7.94; Mature: 7.94
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTTINEVDHSRRAFLRGGALLVAFALVPVSRRALADTEVDTLGTVVLAPDLPGSLRTNPW CCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCHHHCEEEEECCCCCCCCCCCCC LDAWIRVGPDGITVYTGKVELGTGVKTALLQIAAERLEVSPTAINLLTADTALTPNEGYT CEEHEEECCCCEEEEEEEEEECCCHHHHHHHHHHHHHCCCCCEEEEEEECCEECCCCCCC AGSHTIFDSGTALFNAAAQVREMLLESAGRSWNVAPALLTTRDGSILGPTGQRMSYADAV CCCCEEECCCHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCEECCCCCCCHHHHHH RDVDLHRYATSESPSMPPASFKLIGHSLPRLDIPGKVSGGAAFVQDIRLPGMLHARVIRP HHCHHHHHCCCCCCCCCCHHHHHHCCCCCCCCCCCCCCCCHHHHHHHCCCCCEEEEEECC PRPGCTLDAIDIESIKALSGVVQVIRDGNYLAVVARDEWQAIKAMRHGYASARWSGGQAI CCCCCEEEECCHHHHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHCCCCCCCCCCCCCC PESRDIHALLKRLPSRRYPISHEGTPQGATDNEYRARVTKQYLMHGSIGPSCAVAWFKDG CCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCEEEEEEECC TLNVWTHTQGVYPLRAGIAEMLRLPPERVRCIHTEGSGCYGHNGADDAAADAALIAMRVP EEEEEEECCCCCHHHHHHHHHHHCCHHHEEEEEECCCCCCCCCCCCCHHCCEEEEEEECC GTPVRVQWMREQENLWEPYSSAMVTEVQANLDAQGRLQDWNYELWTTPHNERIVNAGRLL CCCEEEEEEHHHHHHCCHHHHHHHHHHHHCCCCCCCEECCCEEEEECCCCCEEECCCCCH PARLLARPFASAPSVPIAQPEGDGDRNAVPLYTVASSRIDMNFVTEMPFRTSAMRSLGAH HHHHHHHHCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCEEEEECCCCHHHHHHHHCCC INVFAIEACIDELAAKAGLDPVALRLAHLTDPRARAVVEKVRDAVGWPQKSSEPGAGLGF EEEEEHHHHHHHHHHHCCCCHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCCCCCHHH AFARYKNIMGYCAIAVRLRVHPQTGEVQIDHVVTAVDVGQIVSPDGLRNQVEGGIVQSTS HHHHHHHHHHEEEEEEEEEECCCCCCEEEEEEEEEECCCCCCCCCCCHHHHCCCEEECCC WTLYEKVAYDAGGIRSYDWSGYPILRFSQVPKKVDVHLLDQPGQPFLGAAEIVQGPMAAA CHHHHHHHHCCCCCCCCCCCCCCEEECCCCCCEECEEEECCCCCCCCCHHHHHCCHHHHH IGNAVANATGRRWLNLPLTRSQQPS HHHHHHHCCCCEEEECCCCCCCCCC >Mature Secondary Structure TTINEVDHSRRAFLRGGALLVAFALVPVSRRALADTEVDTLGTVVLAPDLPGSLRTNPW CCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCHHHCEEEEECCCCCCCCCCCCC LDAWIRVGPDGITVYTGKVELGTGVKTALLQIAAERLEVSPTAINLLTADTALTPNEGYT CEEHEEECCCCEEEEEEEEEECCCHHHHHHHHHHHHHCCCCCEEEEEEECCEECCCCCCC AGSHTIFDSGTALFNAAAQVREMLLESAGRSWNVAPALLTTRDGSILGPTGQRMSYADAV CCCCEEECCCHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCEECCCCCCCHHHHHH RDVDLHRYATSESPSMPPASFKLIGHSLPRLDIPGKVSGGAAFVQDIRLPGMLHARVIRP HHCHHHHHCCCCCCCCCCHHHHHHCCCCCCCCCCCCCCCCHHHHHHHCCCCCEEEEEECC PRPGCTLDAIDIESIKALSGVVQVIRDGNYLAVVARDEWQAIKAMRHGYASARWSGGQAI CCCCCEEEECCHHHHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHCCCCCCCCCCCCCC PESRDIHALLKRLPSRRYPISHEGTPQGATDNEYRARVTKQYLMHGSIGPSCAVAWFKDG CCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCEEEEEEECC TLNVWTHTQGVYPLRAGIAEMLRLPPERVRCIHTEGSGCYGHNGADDAAADAALIAMRVP EEEEEEECCCCCHHHHHHHHHHHCCHHHEEEEEECCCCCCCCCCCCCHHCCEEEEEEECC GTPVRVQWMREQENLWEPYSSAMVTEVQANLDAQGRLQDWNYELWTTPHNERIVNAGRLL CCCEEEEEEHHHHHHCCHHHHHHHHHHHHCCCCCCCEECCCEEEEECCCCCEEECCCCCH PARLLARPFASAPSVPIAQPEGDGDRNAVPLYTVASSRIDMNFVTEMPFRTSAMRSLGAH HHHHHHHHCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCEEEEECCCCHHHHHHHHCCC INVFAIEACIDELAAKAGLDPVALRLAHLTDPRARAVVEKVRDAVGWPQKSSEPGAGLGF EEEEEHHHHHHHHHHHCCCCHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCCCCCHHH AFARYKNIMGYCAIAVRLRVHPQTGEVQIDHVVTAVDVGQIVSPDGLRNQVEGGIVQSTS HHHHHHHHHHEEEEEEEEEECCCCCCEEEEEEEEEECCCCCCCCCCCHHHHCCCEEECCC WTLYEKVAYDAGGIRSYDWSGYPILRFSQVPKKVDVHLLDQPGQPFLGAAEIVQGPMAAA CHHHHHHHHCCCCCCCCCCCCCCEEECCCCCCEECEEEECCCCCCCCCHHHHHCCHHHHH IGNAVANATGRRWLNLPLTRSQQPS HHHHHHHCCCCEEEECCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 7782304; 8157655 [H]