| Definition | Pseudomonas fluorescens Pf0-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007492 |
| Length | 6,438,405 |
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The map label for this gene is iorA [H]
Identifier: 77458672
GI number: 77458672
Start: 2800304
End: 2800777
Strand: Reverse
Name: iorA [H]
Synonym: Pfl01_2447
Alternate gene names: 77458672
Gene position: 2800777-2800304 (Counterclockwise)
Preceding gene: 77458673
Following gene: 77458671
Centisome position: 43.5
GC content: 61.39
Gene sequence:
>474_bases ATGACTCAGATCACCCTCAACGTCAACGGATCCACCCAGGCTCTCGAACTGGAGCCCGACATGCCGCTGCTCTATGCGCT GCGCAATCACCTGGGCCTGAACGGCGCCAAGTACGGCTGTGGTCTGGGCCAATGCGGTGCCTGCACCGTCATCGTCGATG ACCAACCGGTGTTTTCCTGCCTGACACCCTGCGCCGGTCTCGAAGGCAAAAAGGTTCGGACGGTCGAGAGTCTGGGAACC GCCGAACACCCCGGCTCTCTGCAGCAAGCGTTCATCGACAAGCAGGCCGCTCAATGCGGTTATTGCATCGCCGGCATGTT GATGCGTGCGCAGTCTCTGCTGGAACGCAATCCGCACCCCGACGAGCAGACCATTCGCGAACACATGTCCGTCAACCTCT GCCGCTGCGGCACGCACTTGCGCATCATCGAGGCGATCAACCTTGTCGCCCGGCAAAACGGGAGCGCGCTATGA
Upstream 100 bases:
>100_bases AACTCGACGCCCTGGCCGTCTACCTGCGCCATCAGGCCAGCCCCGACCAACCGTGGACCGACCTTCCTGCCACCCTCCAA GCGCTACGTCAGGAGACGAA
Downstream 100 bases:
>100_bases CGACGATCAATGAGGTCGATCACAGTCGCCGTGCGTTCCTGCGCGGGGGCGCTCTGCTGGTAGCGTTTGCTTTGGTGCCG GTCTCGCGCCGCGCCCTGGC
Product: ferredoxin
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 157; Mature: 156
Protein sequence:
>157_residues MTQITLNVNGSTQALELEPDMPLLYALRNHLGLNGAKYGCGLGQCGACTVIVDDQPVFSCLTPCAGLEGKKVRTVESLGT AEHPGSLQQAFIDKQAAQCGYCIAGMLMRAQSLLERNPHPDEQTIREHMSVNLCRCGTHLRIIEAINLVARQNGSAL
Sequences:
>Translated_157_residues MTQITLNVNGSTQALELEPDMPLLYALRNHLGLNGAKYGCGLGQCGACTVIVDDQPVFSCLTPCAGLEGKKVRTVESLGT AEHPGSLQQAFIDKQAAQCGYCIAGMLMRAQSLLERNPHPDEQTIREHMSVNLCRCGTHLRIIEAINLVARQNGSAL >Mature_156_residues TQITLNVNGSTQALELEPDMPLLYALRNHLGLNGAKYGCGLGQCGACTVIVDDQPVFSCLTPCAGLEGKKVRTVESLGTA EHPGSLQQAFIDKQAAQCGYCIAGMLMRAQSLLERNPHPDEQTIREHMSVNLCRCGTHLRIIEAINLVARQNGSAL
Specific function: Specific towards N-containing N-heterocyclic substrates, including isoquinoline, isoquinolin-5-ol, phthalazine and quinazoline [H]
COG id: COG2080
COG function: function code C; Aerobic-type carbon monoxide dehydrogenase, small subunit CoxS/CutS homologs
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 2Fe-2S ferredoxin-type domain [H]
Homologues:
Organism=Homo sapiens, GI91823271, Length=147, Percent_Identity=34.6938775510204, Blast_Score=68, Evalue=4e-12, Organism=Escherichia coli, GI1786480, Length=162, Percent_Identity=37.6543209876543, Blast_Score=106, Evalue=6e-25, Organism=Escherichia coli, GI1789232, Length=148, Percent_Identity=36.4864864864865, Blast_Score=89, Evalue=1e-19, Organism=Caenorhabditis elegans, GI32566215, Length=165, Percent_Identity=36.3636363636364, Blast_Score=103, Evalue=5e-23, Organism=Caenorhabditis elegans, GI17539860, Length=156, Percent_Identity=37.8205128205128, Blast_Score=102, Evalue=7e-23, Organism=Caenorhabditis elegans, GI17540638, Length=157, Percent_Identity=35.6687898089172, Blast_Score=98, Evalue=2e-21, Organism=Drosophila melanogaster, GI17737937, Length=164, Percent_Identity=33.5365853658537, Blast_Score=78, Evalue=2e-15, Organism=Drosophila melanogaster, GI24647197, Length=164, Percent_Identity=33.5365853658537, Blast_Score=68, Evalue=2e-12, Organism=Drosophila melanogaster, GI24647195, Length=164, Percent_Identity=33.5365853658537, Blast_Score=68, Evalue=2e-12, Organism=Drosophila melanogaster, GI24647201, Length=162, Percent_Identity=33.3333333333333, Blast_Score=64, Evalue=4e-11, Organism=Drosophila melanogaster, GI24647199, Length=166, Percent_Identity=31.3253012048193, Blast_Score=64, Evalue=5e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002888 - InterPro: IPR006058 - InterPro: IPR012675 - InterPro: IPR001041 [H]
Pfam domain/function: PF00111 Fer2; PF01799 Fer2_2 [H]
EC number: =1.3.99.16 [H]
Molecular weight: Translated: 16906; Mature: 16775
Theoretical pI: Translated: 6.64; Mature: 6.64
Prosite motif: PS00197 2FE2S_FER_1 ; PS51085 2FE2S_FER_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
5.7 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 8.9 %Cys+Met (Translated Protein) 5.8 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 8.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTQITLNVNGSTQALELEPDMPLLYALRNHLGLNGAKYGCGLGQCGACTVIVDDQPVFSC CCEEEEEECCCCEEEEECCCCHHHHHHHHHCCCCCCCCCCCCCCCCEEEEEECCCHHHHH LTPCAGLEGKKVRTVESLGTAEHPGSLQQAFIDKQAAQCGYCIAGMLMRAQSLLERNPHP HHHCCCCCCCEEHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC DEQTIREHMSVNLCRCGTHLRIIEAINLVARQNGSAL CHHHHHHHHCCCHHHCCCHHHHHHHHHHHHHCCCCCC >Mature Secondary Structure TQITLNVNGSTQALELEPDMPLLYALRNHLGLNGAKYGCGLGQCGACTVIVDDQPVFSC CEEEEEECCCCEEEEECCCCHHHHHHHHHCCCCCCCCCCCCCCCCEEEEEECCCHHHHH LTPCAGLEGKKVRTVESLGTAEHPGSLQQAFIDKQAAQCGYCIAGMLMRAQSLLERNPHP HHHCCCCCCCEEHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC DEQTIREHMSVNLCRCGTHLRIIEAINLVARQNGSAL CHHHHHHHHCCCHHHCCCHHHHHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 7782304; 8157655 [H]