| Definition | Pseudomonas fluorescens Pf0-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007492 |
| Length | 6,438,405 |
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The map label for this gene is 77458613
Identifier: 77458613
GI number: 77458613
Start: 2746557
End: 2747621
Strand: Reverse
Name: 77458613
Synonym: Pfl01_2386
Alternate gene names: NA
Gene position: 2747621-2746557 (Counterclockwise)
Preceding gene: 77458619
Following gene: 77458611
Centisome position: 42.68
GC content: 63.57
Gene sequence:
>1065_bases ATGAAGCACGCACCACACGCCACCGTCACCACCGGGAAAAACCGTCGTCGCCTGCTGGGCCTGTCGATTCTAGCCACCGC GCTGCTGCAATTCGGCGCCTTCGCCCAGGCACAAACCGCAGCCCCCGAGCCGGTCAAGACCGAAGCCGCCAGCGTCAAGG CCGATCTGCCCTTCGGCCCGCTCAAGCATGTGAAGGCCGGCCTGCTGGACGTGGCCTACGCCGAAACCGGCCCGGCCAAT GGCCCGGTGGTGATTCTGCTGCACGGCTGGCCGTATGACATTCACAGCTACGACGACGTCGCGCCGCTGCTGGCTGCCAA GGGTTATCGGGTATTGATGCCGTACGCCCGGGGTTATGGCGACACGCACTTCCTGTCCGACAAGACCGTGCGCAACGGTC AGCCGGCGGCGCTGGCCAGTGACGTGATCGATTTCATGGATGCGCTGAAGATCAAGCAAGCTGTGCTCGGCGGCTACGAC TGGGGCGCGCGCTCGGCAGACATCGTTTCGGCGCTGTGGCCGGAGCGGGTCAAGGCGCTGGTCTCGGTCAGCGGTTACCT GATCGGCAATCAGGCCGCCGGCAAGAACCCGCTGCCGCCCAAGGCCGAACTGCAATGGTGGTATCAGTTCTACTTCGCCA CTGATCGCGGTGAAGCAGGCTACGCCAAGAACACCCATGATTTCGCCAAGCTGATCTGGCAACTGGCATCACCGAAATGG GCCTTCGACGACGCCACGTTCGACCGCAGCGCCAAGGCGTTGCAGAACCCGGATCACGTCGCCATCACCGTATTCAACTA CCGCTGGCGTCTGGGCCTGGTGCAGGGTGAAAGCCAGTACGATGCTCTGGAACAGAAACTCGCCACCGCACCGTCGATCA GCGTGCCGACCATCACCCTCGAAGGCGATGCCAACGGCGCCCCGCACCCGGCGCCCGAGGATTACGCCAAACGCTTCACC GGCAAATACCAGTTCCGCCTGATCAACGGTGGCATCGGTCACAACCTGCCGCAGGAAGACCCGAAAGCCTTCGCTCAGGC GATCATCGACGCCGATCACCTCTGA
Upstream 100 bases:
>100_bases GAAACGGAAACAGCGCAGATACGTGGCCAGTCTTTAATGGGCTCCAGATTCGAAGGGTTCAGCCAGAACCCGGCCCTCGC CGATCATAAGGAGACTTGCC
Downstream 100 bases:
>100_bases AGCGGCACGCCAAACGGCTCGTCATTTGACGAGCCGTTTTTCTTTGGATGGGCGATAACCGAAATAGGCGCTGTAGCACT TGCTGAAATGGCTCGGCGAC
Product: alpha/beta hydrolase fold protein
Products: NA
Alternate protein names: Alpha/Beta Hydrolase Fold; Epoxide Hydrolase; Epoxide Hydrolase Protein; Alpha/Beta Hydrolase; Hydrolase; Alpha/Beta Family Hydrolase; Twin-Arginine Translocation Pathway Signal; Alpha/Beta Fold Family Hydrolase; Hydrolase Alpha/Beta Fold Family; Hydrolase Alpha/Beta Fold; Haloalkane Dehalogenase; Dehalogenase/Hydrolase; S33 Family Peptidase; Hydrolase Or Acyltransferase Of Alpha/Beta Superfamily; Epoxide Hydrolase-Related Protein; Alpha/Beta Hydrolase Superfamily Protein; Epoxide Hydrolase EphB; Alpha/Beta Hydrolase Superfamily Hydrolase/Acyltransferase; Hydrolase Or Acyltransferase; Hydrolase Alpha/Beta Fold Family Protein
Number of amino acids: Translated: 354; Mature: 354
Protein sequence:
>354_residues MKHAPHATVTTGKNRRRLLGLSILATALLQFGAFAQAQTAAPEPVKTEAASVKADLPFGPLKHVKAGLLDVAYAETGPAN GPVVILLHGWPYDIHSYDDVAPLLAAKGYRVLMPYARGYGDTHFLSDKTVRNGQPAALASDVIDFMDALKIKQAVLGGYD WGARSADIVSALWPERVKALVSVSGYLIGNQAAGKNPLPPKAELQWWYQFYFATDRGEAGYAKNTHDFAKLIWQLASPKW AFDDATFDRSAKALQNPDHVAITVFNYRWRLGLVQGESQYDALEQKLATAPSISVPTITLEGDANGAPHPAPEDYAKRFT GKYQFRLINGGIGHNLPQEDPKAFAQAIIDADHL
Sequences:
>Translated_354_residues MKHAPHATVTTGKNRRRLLGLSILATALLQFGAFAQAQTAAPEPVKTEAASVKADLPFGPLKHVKAGLLDVAYAETGPAN GPVVILLHGWPYDIHSYDDVAPLLAAKGYRVLMPYARGYGDTHFLSDKTVRNGQPAALASDVIDFMDALKIKQAVLGGYD WGARSADIVSALWPERVKALVSVSGYLIGNQAAGKNPLPPKAELQWWYQFYFATDRGEAGYAKNTHDFAKLIWQLASPKW AFDDATFDRSAKALQNPDHVAITVFNYRWRLGLVQGESQYDALEQKLATAPSISVPTITLEGDANGAPHPAPEDYAKRFT GKYQFRLINGGIGHNLPQEDPKAFAQAIIDADHL >Mature_354_residues MKHAPHATVTTGKNRRRLLGLSILATALLQFGAFAQAQTAAPEPVKTEAASVKADLPFGPLKHVKAGLLDVAYAETGPAN GPVVILLHGWPYDIHSYDDVAPLLAAKGYRVLMPYARGYGDTHFLSDKTVRNGQPAALASDVIDFMDALKIKQAVLGGYD WGARSADIVSALWPERVKALVSVSGYLIGNQAAGKNPLPPKAELQWWYQFYFATDRGEAGYAKNTHDFAKLIWQLASPKW AFDDATFDRSAKALQNPDHVAITVFNYRWRLGLVQGESQYDALEQKLATAPSISVPTITLEGDANGAPHPAPEDYAKRFT GKYQFRLINGGIGHNLPQEDPKAFAQAIIDADHL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Homo sapiens, GI27597073, Length=141, Percent_Identity=33.3333333333333, Blast_Score=71, Evalue=2e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 38558; Mature: 38558
Theoretical pI: Translated: 7.99; Mature: 7.99
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 0.8 %Met (Translated Protein) 0.8 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 0.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKHAPHATVTTGKNRRRLLGLSILATALLQFGAFAQAQTAAPEPVKTEAASVKADLPFGP CCCCCCCEEECCCCCHHHHHHHHHHHHHHHHCCHHHHCCCCCCCCCCHHHHEEECCCCCH LKHVKAGLLDVAYAETGPANGPVVILLHGWPYDIHSYDDVAPLLAAKGYRVLMPYARGYG HHHHHHHHHHEEECCCCCCCCCEEEEEECCCCCCCCCHHHHHHHHCCCCEEEEHHHCCCC DTHFLSDKTVRNGQPAALASDVIDFMDALKIKQAVLGGYDWGARSADIVSALWPERVKAL CCEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHH VSVSGYLIGNQAAGKNPLPPKAELQWWYQFYFATDRGEAGYAKNTHDFAKLIWQLASPKW HHHHCEEEECCCCCCCCCCCCHHHEEEEEEEEEECCCCCCCCCCHHHHHHHHHHHCCCCC AFDDATFDRSAKALQNPDHVAITVFNYRWRLGLVQGESQYDALEQKLATAPSISVPTITL CCCCCCHHHHHHHHCCCCEEEEEEEEEEEEEEEEECCHHHHHHHHHHHCCCCCCCCEEEE EGDANGAPHPAPEDYAKRFTGKYQFRLINGGIGHNLPQEDPKAFAQAIIDADHL ECCCCCCCCCCCHHHHHHCCCCEEEEEEECCCCCCCCCCCHHHHHHHHHHCCCC >Mature Secondary Structure MKHAPHATVTTGKNRRRLLGLSILATALLQFGAFAQAQTAAPEPVKTEAASVKADLPFGP CCCCCCCEEECCCCCHHHHHHHHHHHHHHHHCCHHHHCCCCCCCCCCHHHHEEECCCCCH LKHVKAGLLDVAYAETGPANGPVVILLHGWPYDIHSYDDVAPLLAAKGYRVLMPYARGYG HHHHHHHHHHEEECCCCCCCCCEEEEEECCCCCCCCCHHHHHHHHCCCCEEEEHHHCCCC DTHFLSDKTVRNGQPAALASDVIDFMDALKIKQAVLGGYDWGARSADIVSALWPERVKAL CCEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHH VSVSGYLIGNQAAGKNPLPPKAELQWWYQFYFATDRGEAGYAKNTHDFAKLIWQLASPKW HHHHCEEEECCCCCCCCCCCCHHHEEEEEEEEEECCCCCCCCCCHHHHHHHHHHHCCCCC AFDDATFDRSAKALQNPDHVAITVFNYRWRLGLVQGESQYDALEQKLATAPSISVPTITL CCCCCCHHHHHHHHCCCCEEEEEEEEEEEEEEEEECCHHHHHHHHHHHCCCCCCCCEEEE EGDANGAPHPAPEDYAKRFTGKYQFRLINGGIGHNLPQEDPKAFAQAIIDADHL ECCCCCCCCCCCHHHHHHCCCCEEEEEEECCCCCCCCCCCHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA