| Definition | Pseudomonas fluorescens Pf0-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007492 |
| Length | 6,438,405 |
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The map label for this gene is 77458513
Identifier: 77458513
GI number: 77458513
Start: 2636697
End: 2637530
Strand: Direct
Name: 77458513
Synonym: Pfl01_2286
Alternate gene names: NA
Gene position: 2636697-2637530 (Clockwise)
Preceding gene: 77458512
Following gene: 77458514
Centisome position: 40.95
GC content: 56.59
Gene sequence:
>834_bases ATGAATTTCTTCAAGAAGCTTCTCGTTTCATTGAAACGTCCTAAAACCGAAGACGTCCAGCTCACATCACAACCCCTTGA AGTCCAGGAGCAGGATATCTACGACAGCATGACCGAGGCTGAAGCGGCAAATCTGGCTGCCCGAGAGGCCAGCGCAGCGT GCCGGGATCGTCATTGGGCATCAGTCGGCATAATCGAGCGCGATGTCCTTGCCTACATGATCAGTCCGAGCTTTTCCGGT GGCCCTTACTGGCCCTCGACTCGTCAGGCCTACCGGGTAGTTCGCCGTAACGACACAATCATCATCGCCACGGAAGGTCT GTCAGACCCATTCGATGACGCGGAAGAAATGGGCAATGGTTTCGAGATGGAGTTGTTCGTAGAAACTGCCGATATACCCG AACACGCCCGTGGCCCGGTGGGTGACGTCGATCCTTTCCAGCGCAGCTGGGCATTCGAACTGGTGGAACACGTTGCCAAA ACGGTTGCGGACGCTGGAGGCTACACTCGCGGACTCGACAAGTACGGTGCGATGTCCATTGAAATTCCCGGGTTCAGCCT CTCGAATCACATGTGCGATCAATTCCCCAAACACTTTGTGACCGAAGACGACTCGACCGGTGTCTTGCTGGGCGCCCCGG AACCGGATTTCCCTACCCGGCTGGATGACATGCCGTTATCCCCTGTGAGAATGGTTCCGGTGGTACTGATCACCGCGTCG GAGCTTGAGTACATTCGTGCTGGCGGGCGGGCAGCACGCGATGACCTGGTGGTCCGATTGAAGGCTGCGGGTGTCGGGCA TGTGAGCAGTTTGCAGCGTGAGAGTGTTGTTTGA
Upstream 100 bases:
>100_bases GGTTTGAGGCATAGTGCCCACTATTCGAAAACAGATCCATTTAATGAAAATAGATTCGCCCCTTCATGGGGAGCGAACCG AAACCCCGCAAGGAACGCAC
Downstream 100 bases:
>100_bases CGCTGCAGTGTTCTCAGGTTCCCTTGCTGGTCACGCCTGCCCAAATCGAGATTTTCGCCAAAGACTTGTCCGCCTTTTAA TGACGAGGGCAACCTCAAAG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 277; Mature: 277
Protein sequence:
>277_residues MNFFKKLLVSLKRPKTEDVQLTSQPLEVQEQDIYDSMTEAEAANLAAREASAACRDRHWASVGIIERDVLAYMISPSFSG GPYWPSTRQAYRVVRRNDTIIIATEGLSDPFDDAEEMGNGFEMELFVETADIPEHARGPVGDVDPFQRSWAFELVEHVAK TVADAGGYTRGLDKYGAMSIEIPGFSLSNHMCDQFPKHFVTEDDSTGVLLGAPEPDFPTRLDDMPLSPVRMVPVVLITAS ELEYIRAGGRAARDDLVVRLKAAGVGHVSSLQRESVV
Sequences:
>Translated_277_residues MNFFKKLLVSLKRPKTEDVQLTSQPLEVQEQDIYDSMTEAEAANLAAREASAACRDRHWASVGIIERDVLAYMISPSFSG GPYWPSTRQAYRVVRRNDTIIIATEGLSDPFDDAEEMGNGFEMELFVETADIPEHARGPVGDVDPFQRSWAFELVEHVAK TVADAGGYTRGLDKYGAMSIEIPGFSLSNHMCDQFPKHFVTEDDSTGVLLGAPEPDFPTRLDDMPLSPVRMVPVVLITAS ELEYIRAGGRAARDDLVVRLKAAGVGHVSSLQRESVV >Mature_277_residues MNFFKKLLVSLKRPKTEDVQLTSQPLEVQEQDIYDSMTEAEAANLAAREASAACRDRHWASVGIIERDVLAYMISPSFSG GPYWPSTRQAYRVVRRNDTIIIATEGLSDPFDDAEEMGNGFEMELFVETADIPEHARGPVGDVDPFQRSWAFELVEHVAK TVADAGGYTRGLDKYGAMSIEIPGFSLSNHMCDQFPKHFVTEDDSTGVLLGAPEPDFPTRLDDMPLSPVRMVPVVLITAS ELEYIRAGGRAARDDLVVRLKAAGVGHVSSLQRESVV
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 30579; Mature: 30579
Theoretical pI: Translated: 4.49; Mature: 4.49
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNFFKKLLVSLKRPKTEDVQLTSQPLEVQEQDIYDSMTEAEAANLAAREASAACRDRHWA CCHHHHHHHHHCCCCCCCCEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC SVGIIERDVLAYMISPSFSGGPYWPSTRQAYRVVRRNDTIIIATEGLSDPFDDAEEMGNG HHCHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHCCCEEEEEECCCCCCCHHHHHHCCC FEMELFVETADIPEHARGPVGDVDPFQRSWAFELVEHVAKTVADAGGYTRGLDKYGAMSI CEEEEEEEECCCCHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHCHHHHCCEEE EIPGFSLSNHMCDQFPKHFVTEDDSTGVLLGAPEPDFPTRLDDMPLSPVRMVPVVLITAS EECCCCHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCCCCCCCCCCCHHHHHEEEEEHH ELEYIRAGGRAARDDLVVRLKAAGVGHVSSLQRESVV HHHHHHCCCCCCCCCEEEEEECCCCCHHHHHHHHCCC >Mature Secondary Structure MNFFKKLLVSLKRPKTEDVQLTSQPLEVQEQDIYDSMTEAEAANLAAREASAACRDRHWA CCHHHHHHHHHCCCCCCCCEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC SVGIIERDVLAYMISPSFSGGPYWPSTRQAYRVVRRNDTIIIATEGLSDPFDDAEEMGNG HHCHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHCCCEEEEEECCCCCCCHHHHHHCCC FEMELFVETADIPEHARGPVGDVDPFQRSWAFELVEHVAKTVADAGGYTRGLDKYGAMSI CEEEEEEEECCCCHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHCHHHHCCEEE EIPGFSLSNHMCDQFPKHFVTEDDSTGVLLGAPEPDFPTRLDDMPLSPVRMVPVVLITAS EECCCCHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCCCCCCCCCCCHHHHHEEEEEHH ELEYIRAGGRAARDDLVVRLKAAGVGHVSSLQRESVV HHHHHHCCCCCCCCCEEEEEECCCCCHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA