| Definition | Pseudomonas fluorescens Pf0-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007492 |
| Length | 6,438,405 |
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The map label for this gene is 77458514
Identifier: 77458514
GI number: 77458514
Start: 2637644
End: 2638051
Strand: Direct
Name: 77458514
Synonym: Pfl01_2287
Alternate gene names: NA
Gene position: 2637644-2638051 (Clockwise)
Preceding gene: 77458513
Following gene: 77458515
Centisome position: 40.97
GC content: 52.7
Gene sequence:
>408_bases ATGAGCAAATTGGGTTGCAGATGTGGGCACGTGATTGTCGATCAGACTGACAGCTTGCCCTACAAGGCGAGTTTACTTCG CGACGAAGTAGAGGATGCATTCTGGGAAGAGGTAAACCAAGAACTCAAGCCCCTGATGACTGCTGCCGAGTCGGGAGACA AGGCTGTGATCGATGGGGCGTTCGGTGAGTTTGCACCTTGGGTCAACGCGACCGACGAATTGATAAGCCGATTATCGAGC CTCCACATCCACCGGACGTTAGATGTTTATGAATGCACGAACTGTGGGCGTCTTTGGGTGCAGAAGGGCGCGGGTAATCA GTTCGTTTCATATGTTCCGGAAGAGGGTGGATATCAGGCGATTTTGTCGGCGACGTCAGGCGATTCCGAGAGCCTGGATT GCGAATAA
Upstream 100 bases:
>100_bases TCAGGTTCCCTTGCTGGTCACGCCTGCCCAAATCGAGATTTTCGCCAAAGACTTGTCCGCCTTTTAATGACGAGGGCAAC CTCAAAGGTTTGAGCCGCAA
Downstream 100 bases:
>100_bases ATAGGGAACTGCTCAGTGTCTAACCGCTATGCCGCCTCCCGAGACAGGATGGCGAATGACTTGAGAAATGCGCAGCTGCT GCAGGGGCAGCGACTTGCTG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 135; Mature: 134
Protein sequence:
>135_residues MSKLGCRCGHVIVDQTDSLPYKASLLRDEVEDAFWEEVNQELKPLMTAAESGDKAVIDGAFGEFAPWVNATDELISRLSS LHIHRTLDVYECTNCGRLWVQKGAGNQFVSYVPEEGGYQAILSATSGDSESLDCE
Sequences:
>Translated_135_residues MSKLGCRCGHVIVDQTDSLPYKASLLRDEVEDAFWEEVNQELKPLMTAAESGDKAVIDGAFGEFAPWVNATDELISRLSS LHIHRTLDVYECTNCGRLWVQKGAGNQFVSYVPEEGGYQAILSATSGDSESLDCE >Mature_134_residues SKLGCRCGHVIVDQTDSLPYKASLLRDEVEDAFWEEVNQELKPLMTAAESGDKAVIDGAFGEFAPWVNATDELISRLSSL HIHRTLDVYECTNCGRLWVQKGAGNQFVSYVPEEGGYQAILSATSGDSESLDCE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14834; Mature: 14702
Theoretical pI: Translated: 4.14; Mature: 4.14
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.7 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 5.2 %Cys+Met (Translated Protein) 3.7 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 4.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSKLGCRCGHVIVDQTDSLPYKASLLRDEVEDAFWEEVNQELKPLMTAAESGDKAVIDGA CCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECC FGEFAPWVNATDELISRLSSLHIHRTLDVYECTNCGRLWVQKGAGNQFVSYVPEEGGYQA CHHHCCCCCCHHHHHHHHHHHHHHHCCCHHHCCCCCEEEEECCCCCCCEEECCCCCCEEE ILSATSGDSESLDCE EEEECCCCCCCCCCC >Mature Secondary Structure SKLGCRCGHVIVDQTDSLPYKASLLRDEVEDAFWEEVNQELKPLMTAAESGDKAVIDGA CCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECC FGEFAPWVNATDELISRLSSLHIHRTLDVYECTNCGRLWVQKGAGNQFVSYVPEEGGYQA CHHHCCCCCCHHHHHHHHHHHHHHHCCCHHHCCCCCEEEEECCCCCCCEEECCCCCCEEE ILSATSGDSESLDCE EEEECCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA