BacMap

Definition	Pseudomonas fluorescens Pf0-1 chromosome, complete genome.
Accession	NC_007492
Length	6,438,405

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The map label for this gene is fabG [H]

Identifier: 77458461

GI number: 77458461

Start: 2563983

End: 2564747

Strand: Reverse

Name: fabG [H]

Synonym: Pfl01_2234

Alternate gene names: 77458461

Gene position: 2564747-2563983 (Counterclockwise)

Preceding gene: 77458462

Following gene: 77458460

Centisome position: 39.84

GC content: 64.05

Gene sequence:

>765_bases
ATGTCTGACACTCAATCCTTGAAAGTGGCCCTGGTGACCGGCGCCGGCAGCGGGATCGGCCGTTCCGTAGCCCTGGGCCT
GCTGGCCGACGGTTACACCCTGGTGCTGGCCGGGCGCCGGCCCGACCCCTTGCAGGCCTTGGTCGATCTGGCGGCCGGCG
AAGGACGCGAAGCCTTGGCGGTGCCCACCGATGTACGCGACCCCGCCAGTGTCGACCAGCTGTTTGCAACCATTGCCGAG
GTCTACGGACGCCTGGACGTGGTCTTCAACAACGCCGGGGTCAATGCCCCTGCCGTGCCGCTGGACGAACTGACCTTCGA
GCAGTGGCGAAACGTGATCGACACCAACCTCAATGGCGTTTTCCTCTGTGCCCGTGGCGCGTTCGGGCTCATGCGCCGGC
AACAGCCACAGGGTGGCCGCATCATCAACAACGGTTCGATTTCGGCTCACACCCCGCGTCCTTTCAGCAGCGCGTACACC
GCCAGCAAACACGCGGTACTGGGATTGACCAAATCGCTGGCGCTGGATGGTCGGGACTTCAATATCGCCTGCAGCCAGAT
CGATATCGGCAATGCCTTGACCGAAATGTCGGTACGCATGACCAAAGGCGTGCGCCAGGCCAACGGCAGCATCGCCGTGG
AGCCGATGGTCGACGTCAAGCATGTCGCCGACGCCGTGCGCTACATCGCCGGTCTGCCCCTGTCGGCCAACGTCCTGAAC
ATGACCGTCATGGCCACTGCCATGCCGTTTGCCGGCCGTGGTTGA

Upstream 100 bases:

>100_bases
TCATCAGCGCCGGGATCGACGGCATTGGCCAACTCGAAATGCGCGTCGGCCCCCGGCCTTGAATCTGTCCTTAAGTGATT
GAAAAAAGGAGAACAACAAA

Downstream 100 bases:

>100_bases
GCCGGCTTTTTTATTGCGTAAGTGAGGTTTACATGAAGCCAGAAGTCTTGCAGCTCAGCCCGATCCTGATTCCGCAAATC
AATGCCCGTCTCGGCGAACT

Product: Short-chain dehydrogenase/reductase SDR

Products: NA

Alternate protein names: 3-ketoacyl-acyl carrier protein reductase [H]

Number of amino acids: Translated: 254; Mature: 253

Protein sequence:

>254_residues
MSDTQSLKVALVTGAGSGIGRSVALGLLADGYTLVLAGRRPDPLQALVDLAAGEGREALAVPTDVRDPASVDQLFATIAE
VYGRLDVVFNNAGVNAPAVPLDELTFEQWRNVIDTNLNGVFLCARGAFGLMRRQQPQGGRIINNGSISAHTPRPFSSAYT
ASKHAVLGLTKSLALDGRDFNIACSQIDIGNALTEMSVRMTKGVRQANGSIAVEPMVDVKHVADAVRYIAGLPLSANVLN
MTVMATAMPFAGRG

Sequences:

>Translated_254_residues
MSDTQSLKVALVTGAGSGIGRSVALGLLADGYTLVLAGRRPDPLQALVDLAAGEGREALAVPTDVRDPASVDQLFATIAE
VYGRLDVVFNNAGVNAPAVPLDELTFEQWRNVIDTNLNGVFLCARGAFGLMRRQQPQGGRIINNGSISAHTPRPFSSAYT
ASKHAVLGLTKSLALDGRDFNIACSQIDIGNALTEMSVRMTKGVRQANGSIAVEPMVDVKHVADAVRYIAGLPLSANVLN
MTVMATAMPFAGRG
>Mature_253_residues
SDTQSLKVALVTGAGSGIGRSVALGLLADGYTLVLAGRRPDPLQALVDLAAGEGREALAVPTDVRDPASVDQLFATIAEV
YGRLDVVFNNAGVNAPAVPLDELTFEQWRNVIDTNLNGVFLCARGAFGLMRRQQPQGGRIINNGSISAHTPRPFSSAYTA
SKHAVLGLTKSLALDGRDFNIACSQIDIGNALTEMSVRMTKGVRQANGSIAVEPMVDVKHVADAVRYIAGLPLSANVLNM
TVMATAMPFAGRG

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the short-chain dehydrogenases/reductases (SDR) family [H]

Homologues:

Organism=Homo sapiens, GI32483357, Length=179, Percent_Identity=31.8435754189944, Blast_Score=85, Evalue=7e-17,
Organism=Homo sapiens, GI109715829, Length=233, Percent_Identity=27.8969957081545, Blast_Score=84, Evalue=1e-16,
Organism=Homo sapiens, GI31542939, Length=247, Percent_Identity=31.1740890688259, Blast_Score=84, Evalue=2e-16,
Organism=Homo sapiens, GI224922801, Length=187, Percent_Identity=33.6898395721925, Blast_Score=81, Evalue=8e-16,
Organism=Homo sapiens, GI126723191, Length=202, Percent_Identity=28.7128712871287, Blast_Score=79, Evalue=3e-15,
Organism=Homo sapiens, GI4504505, Length=194, Percent_Identity=31.9587628865979, Blast_Score=77, Evalue=2e-14,
Organism=Homo sapiens, GI20149619, Length=197, Percent_Identity=29.9492385786802, Blast_Score=76, Evalue=2e-14,
Organism=Homo sapiens, GI19923817, Length=187, Percent_Identity=27.2727272727273, Blast_Score=75, Evalue=7e-14,
Organism=Homo sapiens, GI7706318, Length=170, Percent_Identity=30, Blast_Score=74, Evalue=1e-13,
Organism=Homo sapiens, GI10190704, Length=249, Percent_Identity=28.1124497991968, Blast_Score=73, Evalue=2e-13,
Organism=Homo sapiens, GI7657478, Length=206, Percent_Identity=31.5533980582524, Blast_Score=72, Evalue=7e-13,
Organism=Homo sapiens, GI40254992, Length=168, Percent_Identity=33.9285714285714, Blast_Score=71, Evalue=9e-13,
Organism=Homo sapiens, GI15277342, Length=231, Percent_Identity=29.8701298701299, Blast_Score=68, Evalue=1e-11,
Organism=Homo sapiens, GI5031737, Length=180, Percent_Identity=31.6666666666667, Blast_Score=67, Evalue=2e-11,
Organism=Homo sapiens, GI33667109, Length=180, Percent_Identity=31.6666666666667, Blast_Score=67, Evalue=2e-11,
Organism=Homo sapiens, GI83715985, Length=185, Percent_Identity=31.3513513513514, Blast_Score=66, Evalue=3e-11,
Organism=Homo sapiens, GI4758504, Length=185, Percent_Identity=31.3513513513514, Blast_Score=66, Evalue=4e-11,
Organism=Homo sapiens, GI59889578, Length=139, Percent_Identity=30.2158273381295, Blast_Score=66, Evalue=4e-11,
Organism=Homo sapiens, GI157739938, Length=185, Percent_Identity=25.9459459459459, Blast_Score=65, Evalue=9e-11,
Organism=Escherichia coli, GI1788459, Length=172, Percent_Identity=36.6279069767442, Blast_Score=100, Evalue=7e-23,
Organism=Escherichia coli, GI1787820, Length=251, Percent_Identity=27.4900398406374, Blast_Score=92, Evalue=3e-20,
Organism=Escherichia coli, GI1787335, Length=226, Percent_Identity=29.646017699115, Blast_Score=91, Evalue=1e-19,
Organism=Escherichia coli, GI87082100, Length=202, Percent_Identity=34.1584158415842, Blast_Score=85, Evalue=4e-18,
Organism=Escherichia coli, GI1789057, Length=188, Percent_Identity=32.4468085106383, Blast_Score=81, Evalue=7e-17,
Organism=Escherichia coli, GI2367175, Length=193, Percent_Identity=32.1243523316062, Blast_Score=80, Evalue=1e-16,
Organism=Escherichia coli, GI1790717, Length=199, Percent_Identity=30.6532663316583, Blast_Score=78, Evalue=5e-16,
Organism=Escherichia coli, GI87082160, Length=191, Percent_Identity=27.7486910994764, Blast_Score=71, Evalue=6e-14,
Organism=Escherichia coli, GI1789208, Length=180, Percent_Identity=30.5555555555556, Blast_Score=70, Evalue=1e-13,
Organism=Escherichia coli, GI1786812, Length=190, Percent_Identity=31.5789473684211, Blast_Score=69, Evalue=4e-13,
Organism=Escherichia coli, GI1787526, Length=170, Percent_Identity=31.1764705882353, Blast_Score=68, Evalue=5e-13,
Organism=Escherichia coli, GI1789378, Length=179, Percent_Identity=30.1675977653631, Blast_Score=67, Evalue=1e-12,
Organism=Caenorhabditis elegans, GI17555706, Length=229, Percent_Identity=30.1310043668122, Blast_Score=78, Evalue=4e-15,
Organism=Caenorhabditis elegans, GI17538182, Length=198, Percent_Identity=33.8383838383838, Blast_Score=74, Evalue=9e-14,
Organism=Caenorhabditis elegans, GI17568967, Length=197, Percent_Identity=31.9796954314721, Blast_Score=73, Evalue=2e-13,
Organism=Caenorhabditis elegans, GI17561402, Length=222, Percent_Identity=25.6756756756757, Blast_Score=72, Evalue=3e-13,
Organism=Caenorhabditis elegans, GI71994604, Length=192, Percent_Identity=28.6458333333333, Blast_Score=68, Evalue=4e-12,
Organism=Caenorhabditis elegans, GI17562910, Length=192, Percent_Identity=28.6458333333333, Blast_Score=67, Evalue=1e-11,
Organism=Caenorhabditis elegans, GI71994600, Length=197, Percent_Identity=29.9492385786802, Blast_Score=66, Evalue=2e-11,
Organism=Caenorhabditis elegans, GI17560676, Length=195, Percent_Identity=27.6923076923077, Blast_Score=65, Evalue=3e-11,
Organism=Saccharomyces cerevisiae, GI6322861, Length=189, Percent_Identity=29.1005291005291, Blast_Score=75, Evalue=1e-14,
Organism=Saccharomyces cerevisiae, GI6322067, Length=190, Percent_Identity=30.5263157894737, Blast_Score=65, Evalue=1e-11,
Organism=Saccharomyces cerevisiae, GI6323882, Length=201, Percent_Identity=27.8606965174129, Blast_Score=65, Evalue=1e-11,
Organism=Drosophila melanogaster, GI116007236, Length=252, Percent_Identity=30.952380952381, Blast_Score=98, Evalue=4e-21,
Organism=Drosophila melanogaster, GI116007238, Length=180, Percent_Identity=33.8888888888889, Blast_Score=86, Evalue=3e-17,
Organism=Drosophila melanogaster, GI24641388, Length=242, Percent_Identity=30.9917355371901, Blast_Score=84, Evalue=7e-17,
Organism=Drosophila melanogaster, GI116007234, Length=250, Percent_Identity=28.4, Blast_Score=82, Evalue=4e-16,
Organism=Drosophila melanogaster, GI24580925, Length=182, Percent_Identity=31.8681318681319, Blast_Score=82, Evalue=5e-16,
Organism=Drosophila melanogaster, GI18859837, Length=208, Percent_Identity=32.2115384615385, Blast_Score=78, Evalue=4e-15,
Organism=Drosophila melanogaster, GI21355319, Length=173, Percent_Identity=31.2138728323699, Blast_Score=78, Evalue=5e-15,
Organism=Drosophila melanogaster, GI24641232, Length=172, Percent_Identity=34.8837209302326, Blast_Score=77, Evalue=9e-15,
Organism=Drosophila melanogaster, GI24648693, Length=241, Percent_Identity=27.8008298755187, Blast_Score=77, Evalue=2e-14,
Organism=Drosophila melanogaster, GI21355889, Length=241, Percent_Identity=27.8008298755187, Blast_Score=77, Evalue=2e-14,
Organism=Drosophila melanogaster, GI23397609, Length=234, Percent_Identity=32.0512820512821, Blast_Score=75, Evalue=3e-14,
Organism=Drosophila melanogaster, GI28571387, Length=251, Percent_Identity=29.8804780876494, Blast_Score=75, Evalue=5e-14,
Organism=Drosophila melanogaster, GI28571526, Length=235, Percent_Identity=28.936170212766, Blast_Score=75, Evalue=6e-14,
Organism=Drosophila melanogaster, GI17737361, Length=180, Percent_Identity=33.3333333333333, Blast_Score=74, Evalue=7e-14,
Organism=Drosophila melanogaster, GI24643142, Length=225, Percent_Identity=30.2222222222222, Blast_Score=72, Evalue=2e-13,
Organism=Drosophila melanogaster, GI21357041, Length=235, Percent_Identity=28.5106382978723, Blast_Score=72, Evalue=3e-13,
Organism=Drosophila melanogaster, GI24644339, Length=232, Percent_Identity=27.1551724137931, Blast_Score=72, Evalue=3e-13,
Organism=Drosophila melanogaster, GI116007232, Length=181, Percent_Identity=32.5966850828729, Blast_Score=72, Evalue=5e-13,
Organism=Drosophila melanogaster, GI24648944, Length=231, Percent_Identity=28.1385281385281, Blast_Score=71, Evalue=8e-13,
Organism=Drosophila melanogaster, GI281364494, Length=244, Percent_Identity=27.0491803278689, Blast_Score=68, Evalue=5e-12,
Organism=Drosophila melanogaster, GI24663911, Length=251, Percent_Identity=25.4980079681275, Blast_Score=67, Evalue=2e-11,
Organism=Drosophila melanogaster, GI21358495, Length=213, Percent_Identity=25.8215962441315, Blast_Score=66, Evalue=2e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011284
- InterPro:   IPR002198
- InterPro:   IPR002347
- InterPro:   IPR016040 [H]

Pfam domain/function: PF00106 adh_short [H]

EC number: =1.1.1.100 [H]

Molecular weight: Translated: 26660; Mature: 26529

Theoretical pI: Translated: 7.51; Mature: 7.51

Prosite motif: PS00061 ADH_SHORT

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSDTQSLKVALVTGAGSGIGRSVALGLLADGYTLVLAGRRPDPLQALVDLAAGEGREALA
CCCCCCEEEEEEECCCCCCCHHHHHHHEECCEEEEEECCCCCHHHHHHHHHCCCCCCEEE
VPTDVRDPASVDQLFATIAEVYGRLDVVFNNAGVNAPAVPLDELTFEQWRNVIDTNLNGV
CCCCCCCCHHHHHHHHHHHHHHCCEEEEECCCCCCCCCCCHHHHHHHHHHHHHHCCCCEE
FLCARGAFGLMRRQQPQGGRIINNGSISAHTPRPFSSAYTASKHAVLGLTKSLALDGRDF
EEEECCCHHHHHCCCCCCCEEEECCCCCCCCCCCCCHHHCCCCHHHEEEHHHHEECCCCC
NIACSQIDIGNALTEMSVRMTKGVRQANGSIAVEPMVDVKHVADAVRYIAGLPLSANVLN
EEEEEEEECCHHHHHHHHHHHHHHHHCCCCEEEECCHHHHHHHHHHHHHHCCCCCCHHHH
MTVMATAMPFAGRG
EEEHHHHCCCCCCC
>Mature Secondary Structure 
SDTQSLKVALVTGAGSGIGRSVALGLLADGYTLVLAGRRPDPLQALVDLAAGEGREALA
CCCCCEEEEEEECCCCCCCHHHHHHHEECCEEEEEECCCCCHHHHHHHHHCCCCCCEEE
VPTDVRDPASVDQLFATIAEVYGRLDVVFNNAGVNAPAVPLDELTFEQWRNVIDTNLNGV
CCCCCCCCHHHHHHHHHHHHHHCCEEEEECCCCCCCCCCCHHHHHHHHHHHHHHCCCCEE
FLCARGAFGLMRRQQPQGGRIINNGSISAHTPRPFSSAYTASKHAVLGLTKSLALDGRDF
EEEECCCHHHHHCCCCCCCEEEECCCCCCCCCCCCCHHHCCCCHHHEEEHHHHEECCCCC
NIACSQIDIGNALTEMSVRMTKGVRQANGSIAVEPMVDVKHVADAVRYIAGLPLSANVLN
EEEEEEEECCHHHHHHHHHHHHHHHHCCCCEEEECCHHHHHHHHHHHHHHCCCCCCHHHH
MTVMATAMPFAGRG
EEEHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8759840; 9384377; 9534248; 8654983 [H]