| Definition | Pseudomonas fluorescens Pf0-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007492 |
| Length | 6,438,405 |
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The map label for this gene is yqeB [H]
Identifier: 77458022
GI number: 77458022
Start: 2000127
End: 2000984
Strand: Reverse
Name: yqeB [H]
Synonym: Pfl01_1795
Alternate gene names: 77458022
Gene position: 2000984-2000127 (Counterclockwise)
Preceding gene: 77458023
Following gene: 77458021
Centisome position: 31.08
GC content: 62.94
Gene sequence:
>858_bases ATGTACAACTGGATCGACGCCCTCGCCGACCTGCAGAACCAGGGCGAACCCTGCGTTCTGGTGACGATCATTGAAGAGCT CGGCTCGACGCCGCGCAATGCCGGCTCGAAGATGGTCGTCAACGCCCGCCAGACGTTCGACACCATCGGTGGCGGGCACC TGGAGTACAAAGCCATGCAGATCGCCCGCGACATGCTCGCCAGCGGCAGGCAGGACACCCATCTGGAGCGCTTCAGCCTC GGCGCCAGCCTGGGCCAGTGCTGCGGCGGCGCCACGGTGCTGCTGTTCGAACCGATGGGCCAGGTGCAGGCGCAAATCGC GGTGTTCGGCGCCGGTCATGTCGGCCGGGCGCTGGTGCCCTTGCTCGCCAGCCTGCCCTGCCGGGTGCGCTGGATCGATT CCCGGGAAGAAGAATTCCCCGAGCAGATTCCCCACGGCGTGCGCAAGATCGTCGCCGAGGAGCCTGTGGATGAAATCGAT GATCTGCCCGCCGGCAGCTATTGCATCGTCATGACCCACAACCATCAACTGGATCTGGAACTCACCGCCGCGATCCTCAA GCGCAACGACTTTACCTGGTTCGGCCTGATCGGCTCGAAGACCAAACGGGCCAAGTTCGAACATCGCCTGCGTGATCGTG GTTTCGACGCCAGTGTCGTGCAACGCATGCGCTGCCCGATGGGCATCGGCGAAGTCAAAGGCAAGTTGCCTGTGGAAATC GCCATCTCCATCGCCGGCGAAATCATCGCCACCTATAACGCCAATTTCGGCCAGCACACCGCCAGTGCCGAACCGATTGC CAAACTGCTGCCGGTTTCGCGCCGCAGTCAGGCCGCCACACTCAAAGCCTCAAACTGA
Upstream 100 bases:
>100_bases TGCAGCCCGCGACGCTCTGCGTCGCATCCTGAACAGCGGACGCGGAGCGTCCAGTGATGCATTCCCACGCAGAGCGTGGG AACGATCTGAGAGGTGAGAT
Downstream 100 bases:
>100_bases TTAGAGAACCCTCATGCCTCTGACTCGCAAAGCCTACCGCGCCGCCATCCTGCACAGCATCGCCGACCCTGCCGAGGTCG GCATCGAAGCCTCCTACGAG
Product: molybdenum cofactor sulfurylase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 285; Mature: 285
Protein sequence:
>285_residues MYNWIDALADLQNQGEPCVLVTIIEELGSTPRNAGSKMVVNARQTFDTIGGGHLEYKAMQIARDMLASGRQDTHLERFSL GASLGQCCGGATVLLFEPMGQVQAQIAVFGAGHVGRALVPLLASLPCRVRWIDSREEEFPEQIPHGVRKIVAEEPVDEID DLPAGSYCIVMTHNHQLDLELTAAILKRNDFTWFGLIGSKTKRAKFEHRLRDRGFDASVVQRMRCPMGIGEVKGKLPVEI AISIAGEIIATYNANFGQHTASAEPIAKLLPVSRRSQAATLKASN
Sequences:
>Translated_285_residues MYNWIDALADLQNQGEPCVLVTIIEELGSTPRNAGSKMVVNARQTFDTIGGGHLEYKAMQIARDMLASGRQDTHLERFSL GASLGQCCGGATVLLFEPMGQVQAQIAVFGAGHVGRALVPLLASLPCRVRWIDSREEEFPEQIPHGVRKIVAEEPVDEID DLPAGSYCIVMTHNHQLDLELTAAILKRNDFTWFGLIGSKTKRAKFEHRLRDRGFDASVVQRMRCPMGIGEVKGKLPVEI AISIAGEIIATYNANFGQHTASAEPIAKLLPVSRRSQAATLKASN >Mature_285_residues MYNWIDALADLQNQGEPCVLVTIIEELGSTPRNAGSKMVVNARQTFDTIGGGHLEYKAMQIARDMLASGRQDTHLERFSL GASLGQCCGGATVLLFEPMGQVQAQIAVFGAGHVGRALVPLLASLPCRVRWIDSREEEFPEQIPHGVRKIVAEEPVDEID DLPAGSYCIVMTHNHQLDLELTAAILKRNDFTWFGLIGSKTKRAKFEHRLRDRGFDASVVQRMRCPMGIGEVKGKLPVEI AISIAGEIIATYNANFGQHTASAEPIAKLLPVSRRSQAATLKASN
Specific function: Unknown
COG id: COG1975
COG function: function code O; Xanthine and CO dehydrogenases maturation factor, XdhC/CoxF family
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI1789240, Length=257, Percent_Identity=28.0155642023346, Blast_Score=85, Evalue=4e-18,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR016040 - InterPro: IPR017695 - InterPro: IPR003777 [H]
Pfam domain/function: PF02625 XdhC_CoxI [H]
EC number: NA
Molecular weight: Translated: 31145; Mature: 31145
Theoretical pI: Translated: 6.94; Mature: 6.94
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.1 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 4.9 %Cys+Met (Translated Protein) 2.1 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 4.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MYNWIDALADLQNQGEPCVLVTIIEELGSTPRNAGSKMVVNARQTFDTIGGGHLEYKAMQ CCHHHHHHHHHHCCCCCEEEEEEHHHHCCCCCCCCCEEEEEHHHHHHHCCCCCHHHHHHH IARDMLASGRQDTHLERFSLGASLGQCCGGATVLLFEPMGQVQAQIAVFGAGHVGRALVP HHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCEEEEECCCCHHEEEEEEEECCCHHHHHHH LLASLPCRVRWIDSREEEFPEQIPHGVRKIVAEEPVDEIDDLPAGSYCIVMTHNHQLDLE HHHCCCCEEEECCCHHHHHHHHHHHHHHHHHHHCCHHHHHCCCCCCEEEEEECCCEECHH LTAAILKRNDFTWFGLIGSKTKRAKFEHRLRDRGFDASVVQRMRCPMGIGEVKGKLPVEI HHHHHHHCCCCEEEEEECCCCHHHHHHHHHHHCCCCHHHHHHHHCCCCCHHCCCCCCEEE AISIAGEIIATYNANFGQHTASAEPIAKLLPVSRRSQAATLKASN EEEECCEEEEEECCCCCCCCCCHHHHHHHCCCCCCCCCCEEECCC >Mature Secondary Structure MYNWIDALADLQNQGEPCVLVTIIEELGSTPRNAGSKMVVNARQTFDTIGGGHLEYKAMQ CCHHHHHHHHHHCCCCCEEEEEEHHHHCCCCCCCCCEEEEEHHHHHHHCCCCCHHHHHHH IARDMLASGRQDTHLERFSLGASLGQCCGGATVLLFEPMGQVQAQIAVFGAGHVGRALVP HHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCEEEEECCCCHHEEEEEEEECCCHHHHHHH LLASLPCRVRWIDSREEEFPEQIPHGVRKIVAEEPVDEIDDLPAGSYCIVMTHNHQLDLE HHHCCCCEEEECCCHHHHHHHHHHHHHHHHHHHCCHHHHHCCCCCCEEEEEECCCEECHH LTAAILKRNDFTWFGLIGSKTKRAKFEHRLRDRGFDASVVQRMRCPMGIGEVKGKLPVEI HHHHHHHCCCCEEEEEECCCCHHHHHHHHHHHCCCCHHHHHHHHCCCCCHHCCCCCCEEE AISIAGEIIATYNANFGQHTASAEPIAKLLPVSRRSQAATLKASN EEEECCEEEEEECCCCCCCCCCHHHHHHHCCCCCCCCCCEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9278503 [H]