| Definition | Pseudomonas fluorescens Pf0-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007492 |
| Length | 6,438,405 |
Click here to switch to the map view.
The map label for this gene is guaD [H]
Identifier: 77458021
GI number: 77458021
Start: 1998809
End: 2000113
Strand: Reverse
Name: guaD [H]
Synonym: Pfl01_1794
Alternate gene names: 77458021
Gene position: 2000113-1998809 (Counterclockwise)
Preceding gene: 77458022
Following gene: 77458019
Centisome position: 31.07
GC content: 63.14
Gene sequence:
>1305_bases ATGCCTCTGACTCGCAAAGCCTACCGCGCCGCCATCCTGCACAGCATCGCCGACCCTGCCGAGGTCGGCATCGAAGCCTC CTACGAGTATTTCGAGGACGGCCTGCTGGTGGTCGATGACGGCAAGATCAGCGCCCTCGGCCACGCCAGTGAACTGCTGC CGACACTGCCGGCGGACATCGAGATCACCGATCACAAGGATGCGCTGATCACTCCGGGCTTCATCGACACCCACATCCAC CTTCCGCAGACCGGCATGGTCGGCGCCTATGGTGAGCAACTGCTGGACTGGCTGAACACCTACACCTTCCCGTGCGAAAG CCAGTTTGCCGACAAGGCCCACGCCGATGAAGTGGCGGACATTTTCATCAAGGAACTGCTGCGCAACGGCACCACCACCG CGCTGGTGTTCGGCAGCGTGCATCCGCAGTCGGTGAACTCGTTCTTCGAAGCGGCCGAGAAGCTGGACCTGCGGATGATC GCCGGCAAGGTGATGATGGACCGCAACGCGCCGGACTACCTGACCGACACTCCGGAATCGAGCTACGTCGACAGCAAGGC GCTGATCGAGCGCTGGCACGGCAAGGGTCGTCTGCACTATGCGGTCACCCCGCGTTTCGCCCCGACCAGCACCCCGGAGC AGCTGACACTCGCCGGCCAGCTGCTCAGCGAATACCCGGATCTGTACATGCAGACCCACATCAGCGAAAACCTCAAGGAA GTCGAGTGGGTCAAGGCGCTGTTCCCGGAGCGCAAAGGCTATCTGGACGTCTACGATCACTACCAATTGCTCGGCGAGCG CTCGGTGTTCGCCCACGGCGTGCACCTGTGCGACGACGAATGCGCGCGCCTGGCGCAGACCGGTTCTGCGGTCGCGTTTT GCCCGACCTCGAACTTCTTCCTCGGCAGCGGCCTGTTCAACCTGCCGATGGCCGAGAAGCACAAACTGAACGTCGGCCTC GGGACTGACGTCGGCGGCGGCACCAGTTTCTCGCTGCTGCAAACCCTGAACGAAGCCTACAAGGTGATGCAGTTGCAAGG CGCACGCCTGAGCCCGTTCAAGTCGCTGTACCTCGCCACCCTCGGCGGTGCCCGGGCGCTGCGCCTGGAAGACAAGATCG GCAACCTGCAACCGGGCTCCGACGCCGACTTCCTGGTGCTGGACTACAACGCCACGCCGCTGCTGAGCTACCGCTTGAAG CAGGCCAACAATATTGCCGAGACGTTGTTTGTGCTGATGACCCTGGGCGATGACCGCACTGTGGCCCAGACCTATGCGGC GGGTGCGCTGGTGCACCAGCGCTAG
Upstream 100 bases:
>100_bases CAGCACACCGCCAGTGCCGAACCGATTGCCAAACTGCTGCCGGTTTCGCGCCGCAGTCAGGCCGCCACACTCAAAGCCTC AAACTGATTAGAGAACCCTC
Downstream 100 bases:
>100_bases TTTTCCGCAGACAAAAAAAATCCCCCGGTACTTTGCAGTCCGGGGGATTTTTATTGCCTGTCGATTCGCTTCAGAGCTTG ACCGCCGGCCGCCCCGGTTT
Product: guanine deaminase
Products: NA
Alternate protein names: Guanase; Guanine aminase; Guanine aminohydrolase; GAH [H]
Number of amino acids: Translated: 434; Mature: 433
Protein sequence:
>434_residues MPLTRKAYRAAILHSIADPAEVGIEASYEYFEDGLLVVDDGKISALGHASELLPTLPADIEITDHKDALITPGFIDTHIH LPQTGMVGAYGEQLLDWLNTYTFPCESQFADKAHADEVADIFIKELLRNGTTTALVFGSVHPQSVNSFFEAAEKLDLRMI AGKVMMDRNAPDYLTDTPESSYVDSKALIERWHGKGRLHYAVTPRFAPTSTPEQLTLAGQLLSEYPDLYMQTHISENLKE VEWVKALFPERKGYLDVYDHYQLLGERSVFAHGVHLCDDECARLAQTGSAVAFCPTSNFFLGSGLFNLPMAEKHKLNVGL GTDVGGGTSFSLLQTLNEAYKVMQLQGARLSPFKSLYLATLGGARALRLEDKIGNLQPGSDADFLVLDYNATPLLSYRLK QANNIAETLFVLMTLGDDRTVAQTYAAGALVHQR
Sequences:
>Translated_434_residues MPLTRKAYRAAILHSIADPAEVGIEASYEYFEDGLLVVDDGKISALGHASELLPTLPADIEITDHKDALITPGFIDTHIH LPQTGMVGAYGEQLLDWLNTYTFPCESQFADKAHADEVADIFIKELLRNGTTTALVFGSVHPQSVNSFFEAAEKLDLRMI AGKVMMDRNAPDYLTDTPESSYVDSKALIERWHGKGRLHYAVTPRFAPTSTPEQLTLAGQLLSEYPDLYMQTHISENLKE VEWVKALFPERKGYLDVYDHYQLLGERSVFAHGVHLCDDECARLAQTGSAVAFCPTSNFFLGSGLFNLPMAEKHKLNVGL GTDVGGGTSFSLLQTLNEAYKVMQLQGARLSPFKSLYLATLGGARALRLEDKIGNLQPGSDADFLVLDYNATPLLSYRLK QANNIAETLFVLMTLGDDRTVAQTYAAGALVHQR >Mature_433_residues PLTRKAYRAAILHSIADPAEVGIEASYEYFEDGLLVVDDGKISALGHASELLPTLPADIEITDHKDALITPGFIDTHIHL PQTGMVGAYGEQLLDWLNTYTFPCESQFADKAHADEVADIFIKELLRNGTTTALVFGSVHPQSVNSFFEAAEKLDLRMIA GKVMMDRNAPDYLTDTPESSYVDSKALIERWHGKGRLHYAVTPRFAPTSTPEQLTLAGQLLSEYPDLYMQTHISENLKEV EWVKALFPERKGYLDVYDHYQLLGERSVFAHGVHLCDDECARLAQTGSAVAFCPTSNFFLGSGLFNLPMAEKHKLNVGLG TDVGGGTSFSLLQTLNEAYKVMQLQGARLSPFKSLYLATLGGARALRLEDKIGNLQPGSDADFLVLDYNATPLLSYRLKQ ANNIAETLFVLMTLGDDRTVAQTYAAGALVHQR
Specific function: Catalyzes the hydrolytic deamination of guanine, producing xanthine and ammonia [H]
COG id: COG0402
COG function: function code FR; Cytosine deaminase and related metal-dependent hydrolases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the ATZ/TRZ family [H]
Homologues:
Organism=Homo sapiens, GI4758426, Length=455, Percent_Identity=35.1648351648352, Blast_Score=227, Evalue=1e-59, Organism=Escherichia coli, GI1789249, Length=434, Percent_Identity=56.4516129032258, Blast_Score=518, Evalue=1e-148, Organism=Caenorhabditis elegans, GI17540282, Length=399, Percent_Identity=23.8095238095238, Blast_Score=66, Evalue=3e-11, Organism=Saccharomyces cerevisiae, GI6319963, Length=434, Percent_Identity=32.9493087557604, Blast_Score=223, Evalue=5e-59, Organism=Drosophila melanogaster, GI24643849, Length=441, Percent_Identity=36.281179138322, Blast_Score=238, Evalue=5e-63,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR006680 - InterPro: IPR014311 - InterPro: IPR011059 [H]
Pfam domain/function: PF01979 Amidohydro_1 [H]
EC number: =3.5.4.3 [H]
Molecular weight: Translated: 47822; Mature: 47691
Theoretical pI: Translated: 4.97; Mature: 4.97
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPLTRKAYRAAILHSIADPAEVGIEASYEYFEDGLLVVDDGKISALGHASELLPTLPADI CCCCHHHHHHHHHHHHCCHHHHCCCCCHHHHHCCEEEEECCCEEECCCHHHHHHCCCCCE EITDHKDALITPGFIDTHIHLPQTGMVGAYGEQLLDWLNTYTFPCESQFADKAHADEVAD EEECCCCCEECCCEEECEEECCCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHH IFIKELLRNGTTTALVFGSVHPQSVNSFFEAAEKLDLRMIAGKVMMDRNAPDYLTDTPES HHHHHHHHCCCEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCCCCCCCCC SYVDSKALIERWHGKGRLHYAVTPRFAPTSTPEQLTLAGQLLSEYPDLYMQTHISENLKE CCCCHHHHHHHHCCCCEEEEEECCCCCCCCCCHHHHHHHHHHHHCHHHHHHHHHHHHHHH VEWVKALFPERKGYLDVYDHYQLLGERSVFAHGVHLCDDECARLAQTGSAVAFCPTSNFF HHHHHHHCCCCCCCEEHHHHHHHHCCCHHHHCCCCCCCHHHHHHHHCCCEEEECCCCCCE LGSGLFNLPMAEKHKLNVGLGTDVGGGTSFSLLQTLNEAYKVMQLQGARLSPFKSLYLAT ECCCCCCCCCCCCCEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHH LGGARALRLEDKIGNLQPGSDADFLVLDYNATPLLSYRLKQANNIAETLFVLMTLGDDRT CCCCEEEEEHHHCCCCCCCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHEECCCCCH VAQTYAAGALVHQR HHHHHHHHHHHCCC >Mature Secondary Structure PLTRKAYRAAILHSIADPAEVGIEASYEYFEDGLLVVDDGKISALGHASELLPTLPADI CCCHHHHHHHHHHHHCCHHHHCCCCCHHHHHCCEEEEECCCEEECCCHHHHHHCCCCCE EITDHKDALITPGFIDTHIHLPQTGMVGAYGEQLLDWLNTYTFPCESQFADKAHADEVAD EEECCCCCEECCCEEECEEECCCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHH IFIKELLRNGTTTALVFGSVHPQSVNSFFEAAEKLDLRMIAGKVMMDRNAPDYLTDTPES HHHHHHHHCCCEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCCCCCCCCC SYVDSKALIERWHGKGRLHYAVTPRFAPTSTPEQLTLAGQLLSEYPDLYMQTHISENLKE CCCCHHHHHHHHCCCCEEEEEECCCCCCCCCCHHHHHHHHHHHHCHHHHHHHHHHHHHHH VEWVKALFPERKGYLDVYDHYQLLGERSVFAHGVHLCDDECARLAQTGSAVAFCPTSNFF HHHHHHHCCCCCCCEEHHHHHHHHCCCHHHHCCCCCCCHHHHHHHHCCCEEEECCCCCCE LGSGLFNLPMAEKHKLNVGLGTDVGGGTSFSLLQTLNEAYKVMQLQGARLSPFKSLYLAT ECCCCCCCCCCCCCEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHH LGGARALRLEDKIGNLQPGSDADFLVLDYNATPLLSYRLKQANNIAETLFVLMTLGDDRT CCCCEEEEEHHHCCCCCCCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHEECCCCCH VAQTYAAGALVHQR HHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9278503; 10913105 [H]