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The map label for this gene is ccmC [H]

Identifier: 77457806

GI number: 77457806

Start: 1768262

End: 1769017

Strand: Direct

Name: ccmC [H]

Synonym: Pfl01_1579

Alternate gene names: 77457806

Gene position: 1768262-1769017 (Clockwise)

Preceding gene: 77457805

Following gene: 77457807

Centisome position: 27.46

GC content: 62.04

Gene sequence:

>756_bases
ATGAACTGGACCTGGTTTCACAAGCTCGGCTCGCCCAAGTGGTTCTACGGCATCAGCAGCAAGTTCCTGCCGTGGTTGAG
CATCGCAGCGTTGTTGCTGATCTGCGTTGGCGTCATCTGGGGCCTGGCTTTCGCGCCGCCGGACTATCAGCAAGGCAACA
GCTTTCGCATCATCTATATCCACGTACCCGCCGCGATGCTCGCTCAGTCGATCTACGTGATGCTGGCGGTGTGCGGGGTG
GTCGGGCTGGTGTGGAAGATGAAACTGGCCGACGTCGCCCTGCAATGCGCCGCACCGATCGGCGCGTGGATGACCGCCGT
GGCGCTGGTCACCGGGGCGATCTGGGGCAAGCCGACCTGGGGGTCGTGGTGGGTCTGGGACGCGCGCCTGACCTCGATGC
TGATTCTGCTGTTTCTGTATTTCGGCGTGATCGCCCTGGGCAACGCCATCAGCAATCGCGACAGCGCCGCCAAGGCCTGC
GCGGTGCTGGCCATCGTCGGTGTGATCAACATTCCGATCATCAAATACTCGGTGGAGTGGTGGAACACCCTGCATCAGGG
CGCGACCTTCACCCTCACCGAAAAACCGGCGATGCCCGTCGAGATGTGGCTGCCGCTGCTGCTGACGGTGCTGGGTTTCT
ACTGTTTCTTCGGCGCCGTGCTGTTGCTGCGCATGCGCCTTGAAGTGCTCAAGCGCGAAGCCCGCGCCAGTTGGGTGAAA
GAAGAAGTGCAGAACAGCCTGGAGGCCGCTCGATGA

Upstream 100 bases:

>100_bases
GAAGATCAGCGTCGGCGAATAATGAGGTCTGGTTAAAATTTAACCAGCAAAGACCCTGAGACTGCTCACACCGATGAGCG
GCACCCGTGATGGAAACAGT

Downstream 100 bases:

>100_bases
GTTTCGCGTCATTCGGCGACTTCCTCGCCATGGGCCATCACGGCCTGTATGTCTGGTCGGCCTACGGCATCTGTCTGGCG
GTACTGATCCTCAACGTGGC

Product: cytochrome c-type biogenesis protein CcmC

Products: NA

Alternate protein names: Cytochrome c-type biogenesis protein CcmC [H]

Number of amino acids: Translated: 251; Mature: 251

Protein sequence:

>251_residues
MNWTWFHKLGSPKWFYGISSKFLPWLSIAALLLICVGVIWGLAFAPPDYQQGNSFRIIYIHVPAAMLAQSIYVMLAVCGV
VGLVWKMKLADVALQCAAPIGAWMTAVALVTGAIWGKPTWGSWWVWDARLTSMLILLFLYFGVIALGNAISNRDSAAKAC
AVLAIVGVINIPIIKYSVEWWNTLHQGATFTLTEKPAMPVEMWLPLLLTVLGFYCFFGAVLLLRMRLEVLKREARASWVK
EEVQNSLEAAR

Sequences:

>Translated_251_residues
MNWTWFHKLGSPKWFYGISSKFLPWLSIAALLLICVGVIWGLAFAPPDYQQGNSFRIIYIHVPAAMLAQSIYVMLAVCGV
VGLVWKMKLADVALQCAAPIGAWMTAVALVTGAIWGKPTWGSWWVWDARLTSMLILLFLYFGVIALGNAISNRDSAAKAC
AVLAIVGVINIPIIKYSVEWWNTLHQGATFTLTEKPAMPVEMWLPLLLTVLGFYCFFGAVLLLRMRLEVLKREARASWVK
EEVQNSLEAAR
>Mature_251_residues
MNWTWFHKLGSPKWFYGISSKFLPWLSIAALLLICVGVIWGLAFAPPDYQQGNSFRIIYIHVPAAMLAQSIYVMLAVCGV
VGLVWKMKLADVALQCAAPIGAWMTAVALVTGAIWGKPTWGSWWVWDARLTSMLILLFLYFGVIALGNAISNRDSAAKAC
AVLAIVGVINIPIIKYSVEWWNTLHQGATFTLTEKPAMPVEMWLPLLLTVLGFYCFFGAVLLLRMRLEVLKREARASWVK
EEVQNSLEAAR

Specific function: Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes [H]

COG id: COG0755

COG function: function code O; ABC-type transport system involved in cytochrome c biogenesis, permease component

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein (Probable) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the CcmC/CycZ/HelC family [H]

Homologues:

Organism=Escherichia coli, GI1788527, Length=240, Percent_Identity=52.9166666666667, Blast_Score=250, Evalue=8e-68,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002541
- InterPro:   IPR003557 [H]

Pfam domain/function: PF01578 Cytochrom_C_asm [H]

EC number: NA

Molecular weight: Translated: 28023; Mature: 28023

Theoretical pI: Translated: 9.42; Mature: 9.42

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
5.6 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
5.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNWTWFHKLGSPKWFYGISSKFLPWLSIAALLLICVGVIWGLAFAPPDYQQGNSFRIIYI
CCCEEEECCCCCCEEECCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEE
HVPAAMLAQSIYVMLAVCGVVGLVWKMKLADVALQCAAPIGAWMTAVALVTGAIWGKPTW
ECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
GSWWVWDARLTSMLILLFLYFGVIALGNAISNRDSAAKACAVLAIVGVINIPIIKYSVEW
CCEEEHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHEEEHHH
WNTLHQGATFTLTEKPAMPVEMWLPLLLTVLGFYCFFGAVLLLRMRLEVLKREARASWVK
HHHHHCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
EEVQNSLEAAR
HHHHHHHHCCC
>Mature Secondary Structure
MNWTWFHKLGSPKWFYGISSKFLPWLSIAALLLICVGVIWGLAFAPPDYQQGNSFRIIYI
CCCEEEECCCCCCEEECCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEE
HVPAAMLAQSIYVMLAVCGVVGLVWKMKLADVALQCAAPIGAWMTAVALVTGAIWGKPTW
ECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
GSWWVWDARLTSMLILLFLYFGVIALGNAISNRDSAAKACAVLAIVGVINIPIIKYSVEW
CCEEEHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHEEEHHH
WNTLHQGATFTLTEKPAMPVEMWLPLLLTVLGFYCFFGAVLLLRMRLEVLKREARASWVK
HHHHHCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
EEVQNSLEAAR
HHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 10984043 [H]