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The map label for this gene is ccmD [H]

Identifier: 77457807

GI number: 77457807

Start: 1769014

End: 1769190

Strand: Direct

Name: ccmD [H]

Synonym: Pfl01_1580

Alternate gene names: 77457807

Gene position: 1769014-1769190 (Clockwise)

Preceding gene: 77457806

Following gene: 77457808

Centisome position: 27.48

GC content: 62.71

Gene sequence:

>177_bases
ATGAGTTTCGCGTCATTCGGCGACTTCCTCGCCATGGGCCATCACGGCCTGTATGTCTGGTCGGCCTACGGCATCTGTCT
GGCGGTACTGATCCTCAACGTGGCGGCGCCGATCGCGGCCCGCAAGCGTTATCTGCAACAAGAGGCGCGTCGTCTGCGCC
GGGAGAACGGCAAGTGA

Upstream 100 bases:

>100_bases
GCGCCGTGCTGTTGCTGCGCATGCGCCTTGAAGTGCTCAAGCGCGAAGCCCGCGCCAGTTGGGTGAAAGAAGAAGTGCAG
AACAGCCTGGAGGCCGCTCG

Downstream 100 bases:

>100_bases
ATCCGCTGCGTAAAAAGCGTCTGATCATCATCCTGGCAATTCTGGTCGGGGTCGGCGCTGCCGTCGGCCTGGCCCTGAGC
GCCCTGCAGCAGAACATCAA

Product: Heme exporter protein D

Products: NA

Alternate protein names: Cytochrome c-type biogenesis protein CcmD [H]

Number of amino acids: Translated: 58; Mature: 57

Protein sequence:

>58_residues
MSFASFGDFLAMGHHGLYVWSAYGICLAVLILNVAAPIAARKRYLQQEARRLRRENGK

Sequences:

>Translated_58_residues
MSFASFGDFLAMGHHGLYVWSAYGICLAVLILNVAAPIAARKRYLQQEARRLRRENGK
>Mature_57_residues
SFASFGDFLAMGHHGLYVWSAYGICLAVLILNVAAPIAARKRYLQQEARRLRRENGK

Specific function: Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes (Potential) [H]

COG id: COG3114

COG function: function code U; Heme exporter protein D

Gene ontology:

Cell location: Cell inner membrane; Single-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the CcmD/CycX/HelD family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007078 [H]

Pfam domain/function: PF04995 CcmD [H]

EC number: NA

Molecular weight: Translated: 6539; Mature: 6408

Theoretical pI: Translated: 10.56; Mature: 10.56

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
5.2 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSFASFGDFLAMGHHGLYVWSAYGICLAVLILNVAAPIAARKRYLQQEARRLRRENGK
CCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure 
SFASFGDFLAMGHHGLYVWSAYGICLAVLILNVAAPIAARKRYLQQEARRLRRENGK
CCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8692990 [H]