| Definition | Pseudomonas fluorescens Pf0-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007492 |
| Length | 6,438,405 |
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The map label for this gene is rhlE [H]
Identifier: 77457664
GI number: 77457664
Start: 1612101
End: 1613441
Strand: Direct
Name: rhlE [H]
Synonym: Pfl01_1437
Alternate gene names: 77457664
Gene position: 1612101-1613441 (Clockwise)
Preceding gene: 77457662
Following gene: 77457669
Centisome position: 25.04
GC content: 61.6
Gene sequence:
>1341_bases GTGTTTTCCCAATTCGCCCTGCACGAACGCCTGCTCAAAGCCGTGGCCGAGCTGAAATTTGTCGAGCCAACGCCTGTGCA AGCCGCGGCCATTCCGCTGGCGCTTCAGGGGCGTGACCTGCGGGTGACGGCGCAAACCGGTAGCGGCAAGACCGCCGCTT TCGTCCTGCCGATCCTCAACCGCCTGATCGGCCCGGCCAAGGTTCGCGTCAGCATCAAGACCCTGATCCTGCTGCCGACC CGCGAGCTGGCCCAACAGACCCTGAAGGAAGTCGAGCGCTTTTCGCAGTTCACTTTCATCAAGTCCGGCCTGATCACCGG CGGTGAAGACTTCAAGGTCCAGGCCGCCATGCTGCGCAAGGTGCCGGACATCCTGATCGGCACCCCGGGCCGGATGATCG AGCAACTGAACGCCGGCAACCTCGACCTGAAAGAAGTCGAAGTGCTGGTGCTCGACGAAGCCGACCGCATGCTCGACATG GGTTTCGCCGAAGACGTGCAGCGTCTGGTCGACGAATGCCCGAACCGTCAGCAGACCATGCTGTTCTCCGCCACCACTGG TGGTTCCGGACTGCGCGAGATGATCGCCAAGGTGCTGAACAACCCTGAGCACCTGCAGCTCAACGCGGTCAGCCAGCTGA ACGACACCACCCGTCAGCAGATCATCACCGCCGACCACAACCAGCATAAAGAACAGATCGTCAACTGGCTGCTGGCCAAC GAGACCTATCAGAAGGCCATCGTCTTCACCAACACCCGGGCCATGGCCGACCGCATCTACGGTCGTCTCGTCGCCCAGGA ATACAAGGCGTTCGTGCTGCACGGAGAAAAAGACCAGAAGGATCGCAAACTGGCGATCGACCGTCTGAAGCAGGGCGGCG TGAAGATCCTGGTGGCTACCGACGTGGCGGCCCGTGGTCTGGACGTCGACGGTCTGGATCTGGTGATCAACTTCGACATG CCACGCAGCGGCGACGAATACGTGCACCGTATCGGTCGTACCGGCCGAGCCGGCAACGACGGTCTGGCGATCTCGCTGAT CTGCCACGGCGACTGGAACCTGATGTCGAGCATCGAGCGTTATCTGAAGCAGAGCTTCGAGCGCCGCACCATCAAGGAAG TCAAAGGCACCTACGGCGGACCGAAAAAGGTCAAGGCCTCGGGCAAAGCCGTCGGCGTGAAGAAGAAAAAGACCGACGCC AAGGGCGACAAGAAGAAAACTGCCGCCAAAACCCCGACCAAGCGCAAGAGCGCCAACCGTCCGAAACCGGACGCTCTGGT GAGCAGCGACGGCATGGCCCCACTGAAACGCCGCAAACCGGCAGCGCCAGCGGCTGAGTAA
Upstream 100 bases:
>100_bases AGCCACTGATTACGGCGGATTTCACAAAGAAACTCGGCCTGAGCGCTCGAAACCGGTAACCTATGCAGCTGATTTTTTGC ATATCTTCGAGGTAGCACCC
Downstream 100 bases:
>100_bases GCCGTTTCAGGCAGGCAAAGAAAAACCCGGACATGGTCCGGGTTTTTTTATTGCCAGCGTTTATCAGCTGCCCAGCAGGC CTGTGGTGTCGGCATCAAAG
Product: DEAD/DEAH box helicase-like protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 446; Mature: 446
Protein sequence:
>446_residues MFSQFALHERLLKAVAELKFVEPTPVQAAAIPLALQGRDLRVTAQTGSGKTAAFVLPILNRLIGPAKVRVSIKTLILLPT RELAQQTLKEVERFSQFTFIKSGLITGGEDFKVQAAMLRKVPDILIGTPGRMIEQLNAGNLDLKEVEVLVLDEADRMLDM GFAEDVQRLVDECPNRQQTMLFSATTGGSGLREMIAKVLNNPEHLQLNAVSQLNDTTRQQIITADHNQHKEQIVNWLLAN ETYQKAIVFTNTRAMADRIYGRLVAQEYKAFVLHGEKDQKDRKLAIDRLKQGGVKILVATDVAARGLDVDGLDLVINFDM PRSGDEYVHRIGRTGRAGNDGLAISLICHGDWNLMSSIERYLKQSFERRTIKEVKGTYGGPKKVKASGKAVGVKKKKTDA KGDKKKTAAKTPTKRKSANRPKPDALVSSDGMAPLKRRKPAAPAAE
Sequences:
>Translated_446_residues MFSQFALHERLLKAVAELKFVEPTPVQAAAIPLALQGRDLRVTAQTGSGKTAAFVLPILNRLIGPAKVRVSIKTLILLPT RELAQQTLKEVERFSQFTFIKSGLITGGEDFKVQAAMLRKVPDILIGTPGRMIEQLNAGNLDLKEVEVLVLDEADRMLDM GFAEDVQRLVDECPNRQQTMLFSATTGGSGLREMIAKVLNNPEHLQLNAVSQLNDTTRQQIITADHNQHKEQIVNWLLAN ETYQKAIVFTNTRAMADRIYGRLVAQEYKAFVLHGEKDQKDRKLAIDRLKQGGVKILVATDVAARGLDVDGLDLVINFDM PRSGDEYVHRIGRTGRAGNDGLAISLICHGDWNLMSSIERYLKQSFERRTIKEVKGTYGGPKKVKASGKAVGVKKKKTDA KGDKKKTAAKTPTKRKSANRPKPDALVSSDGMAPLKRRKPAAPAAE >Mature_446_residues MFSQFALHERLLKAVAELKFVEPTPVQAAAIPLALQGRDLRVTAQTGSGKTAAFVLPILNRLIGPAKVRVSIKTLILLPT RELAQQTLKEVERFSQFTFIKSGLITGGEDFKVQAAMLRKVPDILIGTPGRMIEQLNAGNLDLKEVEVLVLDEADRMLDM GFAEDVQRLVDECPNRQQTMLFSATTGGSGLREMIAKVLNNPEHLQLNAVSQLNDTTRQQIITADHNQHKEQIVNWLLAN ETYQKAIVFTNTRAMADRIYGRLVAQEYKAFVLHGEKDQKDRKLAIDRLKQGGVKILVATDVAARGLDVDGLDLVINFDM PRSGDEYVHRIGRTGRAGNDGLAISLICHGDWNLMSSIERYLKQSFERRTIKEVKGTYGGPKKVKASGKAVGVKKKKTDA KGDKKKTAAKTPTKRKSANRPKPDALVSSDGMAPLKRRKPAAPAAE
Specific function: Acts as an ATP-dependent RNA helicase, able to unwind ds-RNA [H]
COG id: COG0513
COG function: function code LKJ; Superfamily II DNA and RNA helicases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 helicase C-terminal domain [H]
Homologues:
Organism=Homo sapiens, GI224593278, Length=360, Percent_Identity=41.3888888888889, Blast_Score=265, Evalue=6e-71, Organism=Homo sapiens, GI301171467, Length=366, Percent_Identity=37.431693989071, Blast_Score=231, Evalue=1e-60, Organism=Homo sapiens, GI87196351, Length=366, Percent_Identity=37.431693989071, Blast_Score=231, Evalue=1e-60, Organism=Homo sapiens, GI301171475, Length=366, Percent_Identity=37.431693989071, Blast_Score=231, Evalue=1e-60, Organism=Homo sapiens, GI169881239, Length=373, Percent_Identity=36.9973190348526, Blast_Score=229, Evalue=4e-60, Organism=Homo sapiens, GI13514809, Length=373, Percent_Identity=36.9973190348526, Blast_Score=229, Evalue=4e-60, Organism=Homo sapiens, GI216548263, Length=364, Percent_Identity=38.1868131868132, Blast_Score=227, Evalue=2e-59, Organism=Homo sapiens, GI13518015, Length=364, Percent_Identity=38.1868131868132, Blast_Score=227, Evalue=2e-59, Organism=Homo sapiens, GI262231852, Length=364, Percent_Identity=38.1868131868132, Blast_Score=227, Evalue=2e-59, Organism=Homo sapiens, GI222352149, Length=370, Percent_Identity=36.2162162162162, Blast_Score=226, Evalue=3e-59, Organism=Homo sapiens, GI262118318, Length=360, Percent_Identity=37.7777777777778, Blast_Score=226, Evalue=3e-59, Organism=Homo sapiens, GI41327773, Length=358, Percent_Identity=37.7094972067039, Blast_Score=224, Evalue=1e-58, Organism=Homo sapiens, GI148613856, Length=365, Percent_Identity=35.8904109589041, Blast_Score=224, Evalue=2e-58, Organism=Homo sapiens, GI38201710, Length=365, Percent_Identity=35.8904109589041, Blast_Score=224, Evalue=2e-58, Organism=Homo sapiens, GI45446747, Length=372, Percent_Identity=34.9462365591398, Blast_Score=223, Evalue=4e-58, Organism=Homo sapiens, GI45446743, Length=372, Percent_Identity=34.9462365591398, Blast_Score=223, Evalue=4e-58, Organism=Homo sapiens, GI20149629, Length=362, Percent_Identity=36.1878453038674, Blast_Score=223, Evalue=4e-58, Organism=Homo sapiens, GI31542656, Length=379, Percent_Identity=35.3562005277045, Blast_Score=220, Evalue=2e-57, Organism=Homo sapiens, GI51094101, Length=381, Percent_Identity=35.4330708661417, Blast_Score=219, Evalue=4e-57, Organism=Homo sapiens, GI164419743, Length=381, Percent_Identity=35.4330708661417, Blast_Score=219, Evalue=4e-57, Organism=Homo sapiens, GI4758138, Length=358, Percent_Identity=35.4748603351955, Blast_Score=218, Evalue=1e-56, Organism=Homo sapiens, GI41327771, Length=392, Percent_Identity=32.9081632653061, Blast_Score=211, Evalue=1e-54, Organism=Homo sapiens, GI188035877, Length=371, Percent_Identity=34.7708894878706, Blast_Score=202, Evalue=7e-52, Organism=Homo sapiens, GI55749865, Length=355, Percent_Identity=34.3661971830986, Blast_Score=201, Evalue=1e-51, Organism=Homo sapiens, GI13514831, Length=353, Percent_Identity=34.2776203966006, Blast_Score=196, Evalue=3e-50, Organism=Homo sapiens, GI41327776, Length=362, Percent_Identity=34.5303867403315, Blast_Score=196, Evalue=3e-50, Organism=Homo sapiens, GI21071032, Length=358, Percent_Identity=32.9608938547486, Blast_Score=195, Evalue=9e-50, Organism=Homo sapiens, GI164664518, Length=366, Percent_Identity=30.8743169398907, Blast_Score=192, Evalue=4e-49, Organism=Homo sapiens, GI21040371, Length=351, Percent_Identity=34.1880341880342, Blast_Score=191, Evalue=1e-48, Organism=Homo sapiens, GI4758112, Length=349, Percent_Identity=33.2378223495702, Blast_Score=189, Evalue=3e-48, Organism=Homo sapiens, GI18375623, Length=349, Percent_Identity=33.2378223495702, Blast_Score=189, Evalue=3e-48, Organism=Homo sapiens, GI7661920, Length=360, Percent_Identity=31.3888888888889, Blast_Score=189, Evalue=5e-48, Organism=Homo sapiens, GI38569505, Length=372, Percent_Identity=32.258064516129, Blast_Score=189, Evalue=5e-48, Organism=Homo sapiens, GI38569503, Length=372, Percent_Identity=32.258064516129, Blast_Score=189, Evalue=5e-48, Organism=Homo sapiens, GI9506931, Length=403, Percent_Identity=32.0099255583127, Blast_Score=185, Evalue=6e-47, Organism=Homo sapiens, GI13129006, Length=364, Percent_Identity=33.7912087912088, Blast_Score=185, Evalue=8e-47, Organism=Homo sapiens, GI4503529, Length=367, Percent_Identity=32.425068119891, Blast_Score=184, Evalue=1e-46, Organism=Homo sapiens, GI50659095, Length=384, Percent_Identity=32.8125, Blast_Score=182, Evalue=4e-46, Organism=Homo sapiens, GI83700235, Length=367, Percent_Identity=32.1525885558583, Blast_Score=179, Evalue=6e-45, Organism=Homo sapiens, GI17505907, Length=415, Percent_Identity=29.8795180722892, Blast_Score=176, Evalue=3e-44, Organism=Homo sapiens, GI38327634, Length=372, Percent_Identity=33.3333333333333, Blast_Score=174, Evalue=2e-43, Organism=Homo sapiens, GI6005743, Length=382, Percent_Identity=32.9842931937173, Blast_Score=173, Evalue=2e-43, Organism=Homo sapiens, GI8922886, Length=382, Percent_Identity=32.9842931937173, Blast_Score=173, Evalue=3e-43, Organism=Homo sapiens, GI164419732, Length=351, Percent_Identity=33.048433048433, Blast_Score=168, Evalue=1e-41, Organism=Homo sapiens, GI41327779, Length=370, Percent_Identity=35.1351351351351, Blast_Score=167, Evalue=1e-41, Organism=Homo sapiens, GI62241022, Length=364, Percent_Identity=33.2417582417582, Blast_Score=165, Evalue=6e-41, Organism=Homo sapiens, GI256223453, Length=359, Percent_Identity=28.9693593314763, Blast_Score=163, Evalue=3e-40, Organism=Homo sapiens, GI154759257, Length=394, Percent_Identity=29.9492385786802, Blast_Score=159, Evalue=4e-39, Organism=Homo sapiens, GI62241024, Length=344, Percent_Identity=33.1395348837209, Blast_Score=157, Evalue=3e-38, Organism=Homo sapiens, GI4826686, Length=332, Percent_Identity=29.8192771084337, Blast_Score=151, Evalue=1e-36, Organism=Homo sapiens, GI9966805, Length=320, Percent_Identity=30, Blast_Score=141, Evalue=1e-33, Organism=Homo sapiens, GI256773275, Length=395, Percent_Identity=28.3544303797468, Blast_Score=135, Evalue=6e-32, Organism=Homo sapiens, GI20336298, Length=223, Percent_Identity=36.7713004484305, Blast_Score=129, Evalue=8e-30, Organism=Escherichia coli, GI1787016, Length=373, Percent_Identity=39.9463806970509, Blast_Score=280, Evalue=1e-76, Organism=Escherichia coli, GI1788930, Length=385, Percent_Identity=40.2597402597403, Blast_Score=253, Evalue=2e-68, Organism=Escherichia coli, GI1790214, Length=413, Percent_Identity=35.8353510895884, Blast_Score=250, Evalue=1e-67, Organism=Escherichia coli, GI87082221, Length=375, Percent_Identity=39.2, Blast_Score=246, Evalue=2e-66, Organism=Escherichia coli, GI1787605, Length=337, Percent_Identity=38.8724035608309, Blast_Score=226, Evalue=2e-60, Organism=Caenorhabditis elegans, GI17510559, Length=395, Percent_Identity=35.9493670886076, Blast_Score=234, Evalue=5e-62, Organism=Caenorhabditis elegans, GI71995718, Length=368, Percent_Identity=38.5869565217391, Blast_Score=229, Evalue=3e-60, Organism=Caenorhabditis elegans, GI17507877, Length=379, Percent_Identity=36.1477572559367, Blast_Score=228, Evalue=6e-60, Organism=Caenorhabditis elegans, GI17555296, Length=366, Percent_Identity=35.792349726776, Blast_Score=227, Evalue=1e-59, Organism=Caenorhabditis elegans, GI32565321, Length=402, Percent_Identity=34.0796019900498, Blast_Score=227, Evalue=1e-59, Organism=Caenorhabditis elegans, GI17507879, Length=393, Percent_Identity=35.6234096692112, Blast_Score=223, Evalue=1e-58, Organism=Caenorhabditis elegans, GI86570094, Length=360, Percent_Identity=38.3333333333333, Blast_Score=222, Evalue=3e-58, Organism=Caenorhabditis elegans, GI17510307, Length=364, Percent_Identity=36.8131868131868, Blast_Score=214, Evalue=8e-56, Organism=Caenorhabditis elegans, GI17510309, Length=364, Percent_Identity=36.8131868131868, Blast_Score=214, Evalue=8e-56, Organism=Caenorhabditis elegans, GI71995514, Length=364, Percent_Identity=36.8131868131868, Blast_Score=214, Evalue=9e-56, Organism=Caenorhabditis elegans, GI17507881, Length=373, Percent_Identity=34.8525469168901, Blast_Score=211, Evalue=5e-55, Organism=Caenorhabditis elegans, GI115533224, Length=344, Percent_Identity=35.4651162790698, Blast_Score=211, Evalue=7e-55, Organism=Caenorhabditis elegans, GI17552114, Length=366, Percent_Identity=31.1475409836066, Blast_Score=205, Evalue=5e-53, Organism=Caenorhabditis elegans, GI71995724, Length=360, Percent_Identity=33.6111111111111, Blast_Score=202, Evalue=3e-52, Organism=Caenorhabditis elegans, GI71999646, Length=362, Percent_Identity=32.3204419889503, Blast_Score=202, Evalue=3e-52, Organism=Caenorhabditis elegans, GI17552642, Length=369, Percent_Identity=32.2493224932249, Blast_Score=202, Evalue=4e-52, Organism=Caenorhabditis elegans, GI17507121, Length=360, Percent_Identity=33.3333333333333, Blast_Score=201, Evalue=4e-52, Organism=Caenorhabditis elegans, GI71999644, Length=362, Percent_Identity=32.3204419889503, Blast_Score=201, Evalue=7e-52, Organism=Caenorhabditis elegans, GI17537549, Length=374, Percent_Identity=35.8288770053476, Blast_Score=199, Evalue=2e-51, Organism=Caenorhabditis elegans, GI71987143, Length=366, Percent_Identity=30.6010928961749, Blast_Score=196, Evalue=2e-50, Organism=Caenorhabditis elegans, GI71982858, Length=363, Percent_Identity=32.5068870523416, Blast_Score=191, Evalue=6e-49, Organism=Caenorhabditis elegans, GI17507945, Length=366, Percent_Identity=34.1530054644809, Blast_Score=189, Evalue=3e-48, Organism=Caenorhabditis elegans, GI71990816, Length=366, Percent_Identity=32.5136612021858, Blast_Score=179, Evalue=3e-45, Organism=Caenorhabditis elegans, GI17509811, Length=357, Percent_Identity=30.2521008403361, Blast_Score=179, Evalue=3e-45, Organism=Caenorhabditis elegans, GI193206561, Length=347, Percent_Identity=31.9884726224784, Blast_Score=177, Evalue=1e-44, Organism=Caenorhabditis elegans, GI115532548, Length=434, Percent_Identity=27.6497695852535, Blast_Score=172, Evalue=3e-43, Organism=Caenorhabditis elegans, GI17505370, Length=337, Percent_Identity=32.6409495548961, Blast_Score=170, Evalue=2e-42, Organism=Caenorhabditis elegans, GI115532546, Length=389, Percent_Identity=28.0205655526992, Blast_Score=169, Evalue=3e-42, Organism=Caenorhabditis elegans, GI17508543, Length=380, Percent_Identity=28.1578947368421, Blast_Score=158, Evalue=5e-39, Organism=Caenorhabditis elegans, GI17507641, Length=388, Percent_Identity=30.1546391752577, Blast_Score=157, Evalue=1e-38, Organism=Caenorhabditis elegans, GI17536099, Length=400, Percent_Identity=32, Blast_Score=152, Evalue=3e-37, Organism=Caenorhabditis elegans, GI32564046, Length=374, Percent_Identity=30.2139037433155, Blast_Score=152, Evalue=3e-37, Organism=Caenorhabditis elegans, GI17536101, Length=397, Percent_Identity=32.2418136020151, Blast_Score=152, Evalue=4e-37, Organism=Caenorhabditis elegans, GI17536103, Length=397, Percent_Identity=32.2418136020151, Blast_Score=151, Evalue=8e-37, Organism=Caenorhabditis elegans, GI193208216, Length=397, Percent_Identity=30.4785894206549, Blast_Score=146, Evalue=2e-35, Organism=Caenorhabditis elegans, GI17556951, Length=336, Percent_Identity=29.4642857142857, Blast_Score=138, Evalue=5e-33, Organism=Caenorhabditis elegans, GI25148203, Length=419, Percent_Identity=24.8210023866348, Blast_Score=135, Evalue=4e-32, Organism=Caenorhabditis elegans, GI17553716, Length=364, Percent_Identity=26.0989010989011, Blast_Score=130, Evalue=1e-30, Organism=Caenorhabditis elegans, GI71997889, Length=373, Percent_Identity=27.3458445040214, Blast_Score=128, Evalue=5e-30, Organism=Caenorhabditis elegans, GI71982862, Length=187, Percent_Identity=39.572192513369, Blast_Score=119, Evalue=5e-27, Organism=Caenorhabditis elegans, GI25148291, Length=326, Percent_Identity=27.6073619631902, Blast_Score=117, Evalue=1e-26, Organism=Caenorhabditis elegans, GI71987152, Length=105, Percent_Identity=36.1904761904762, Blast_Score=89, Evalue=7e-18, Organism=Saccharomyces cerevisiae, GI6325138, Length=380, Percent_Identity=36.8421052631579, Blast_Score=246, Evalue=4e-66, Organism=Saccharomyces cerevisiae, GI6321856, Length=371, Percent_Identity=37.7358490566038, Blast_Score=246, Evalue=5e-66, Organism=Saccharomyces cerevisiae, GI6324778, Length=380, Percent_Identity=35, Blast_Score=241, Evalue=1e-64, Organism=Saccharomyces cerevisiae, GI6324217, Length=354, Percent_Identity=37.5706214689266, Blast_Score=231, Evalue=2e-61, Organism=Saccharomyces cerevisiae, GI6323021, Length=356, Percent_Identity=37.3595505617978, Blast_Score=228, Evalue=1e-60, Organism=Saccharomyces cerevisiae, GI6320041, Length=353, Percent_Identity=33.7110481586402, Blast_Score=216, Evalue=6e-57, Organism=Saccharomyces cerevisiae, GI6320173, Length=415, Percent_Identity=33.9759036144578, Blast_Score=215, Evalue=1e-56, Organism=Saccharomyces cerevisiae, GI6321360, Length=343, Percent_Identity=36.734693877551, Blast_Score=208, Evalue=2e-54, Organism=Saccharomyces cerevisiae, GI6320449, Length=374, Percent_Identity=34.4919786096257, Blast_Score=202, Evalue=7e-53, Organism=Saccharomyces cerevisiae, GI6324620, Length=371, Percent_Identity=32.8840970350404, Blast_Score=201, Evalue=3e-52, Organism=Saccharomyces cerevisiae, GI6320224, Length=363, Percent_Identity=30.5785123966942, Blast_Score=190, Evalue=4e-49, Organism=Saccharomyces cerevisiae, GI6321963, Length=378, Percent_Identity=33.0687830687831, Blast_Score=186, Evalue=8e-48, Organism=Saccharomyces cerevisiae, GI6320119, Length=351, Percent_Identity=31.6239316239316, Blast_Score=181, Evalue=2e-46, Organism=Saccharomyces cerevisiae, GI6321111, Length=368, Percent_Identity=32.6086956521739, Blast_Score=181, Evalue=2e-46, Organism=Saccharomyces cerevisiae, GI6322427, Length=370, Percent_Identity=31.8918918918919, Blast_Score=180, Evalue=4e-46, Organism=Saccharomyces cerevisiae, GI6323947, Length=375, Percent_Identity=34.1333333333333, Blast_Score=180, Evalue=4e-46, Organism=Saccharomyces cerevisiae, GI6319714, Length=380, Percent_Identity=30.7894736842105, Blast_Score=177, Evalue=4e-45, Organism=Saccharomyces cerevisiae, GI6321267, Length=375, Percent_Identity=33.6, Blast_Score=176, Evalue=8e-45, Organism=Saccharomyces cerevisiae, GI6322912, Length=366, Percent_Identity=30.8743169398907, Blast_Score=167, Evalue=2e-42, Organism=Saccharomyces cerevisiae, GI6322323, Length=366, Percent_Identity=30.8743169398907, Blast_Score=167, Evalue=2e-42, Organism=Saccharomyces cerevisiae, GI6319618, Length=405, Percent_Identity=31.8518518518519, Blast_Score=160, Evalue=3e-40, Organism=Saccharomyces cerevisiae, GI6320400, Length=386, Percent_Identity=29.5336787564767, Blast_Score=155, Evalue=1e-38, Organism=Saccharomyces cerevisiae, GI6323306, Length=417, Percent_Identity=27.3381294964029, Blast_Score=147, Evalue=4e-36, Organism=Saccharomyces cerevisiae, GI6322876, Length=430, Percent_Identity=26.046511627907, Blast_Score=114, Evalue=3e-26, Organism=Saccharomyces cerevisiae, GI6321374, Length=398, Percent_Identity=24.1206030150754, Blast_Score=90, Evalue=8e-19, Organism=Saccharomyces cerevisiae, GI6324366, Length=156, Percent_Identity=33.3333333333333, Blast_Score=84, Evalue=4e-17, Organism=Drosophila melanogaster, GI21356161, Length=374, Percent_Identity=39.3048128342246, Blast_Score=266, Evalue=2e-71, Organism=Drosophila melanogaster, GI28574962, Length=378, Percent_Identity=36.7724867724868, Blast_Score=233, Evalue=2e-61, Organism=Drosophila melanogaster, GI24584399, Length=350, Percent_Identity=36.8571428571429, Blast_Score=231, Evalue=9e-61, Organism=Drosophila melanogaster, GI21355075, Length=371, Percent_Identity=36.3881401617251, Blast_Score=230, Evalue=1e-60, Organism=Drosophila melanogaster, GI24662330, Length=368, Percent_Identity=35.3260869565217, Blast_Score=224, Evalue=9e-59, Organism=Drosophila melanogaster, GI17985987, Length=379, Percent_Identity=36.1477572559367, Blast_Score=222, Evalue=5e-58, Organism=Drosophila melanogaster, GI24642151, Length=354, Percent_Identity=36.7231638418079, Blast_Score=219, Evalue=3e-57, Organism=Drosophila melanogaster, GI24584994, Length=395, Percent_Identity=33.4177215189873, Blast_Score=219, Evalue=4e-57, Organism=Drosophila melanogaster, GI24585582, Length=364, Percent_Identity=35.989010989011, Blast_Score=215, Evalue=6e-56, Organism=Drosophila melanogaster, GI24644479, Length=362, Percent_Identity=34.8066298342541, Blast_Score=212, Evalue=4e-55, Organism=Drosophila melanogaster, GI24644483, Length=362, Percent_Identity=34.8066298342541, Blast_Score=211, Evalue=6e-55, Organism=Drosophila melanogaster, GI281361218, Length=362, Percent_Identity=34.8066298342541, Blast_Score=211, Evalue=6e-55, Organism=Drosophila melanogaster, GI24644481, Length=362, Percent_Identity=34.8066298342541, Blast_Score=211, Evalue=6e-55, Organism=Drosophila melanogaster, GI24644487, Length=362, Percent_Identity=34.8066298342541, Blast_Score=211, Evalue=7e-55, Organism=Drosophila melanogaster, GI45551833, Length=362, Percent_Identity=34.8066298342541, Blast_Score=211, Evalue=7e-55, Organism=Drosophila melanogaster, GI24644485, Length=362, Percent_Identity=34.8066298342541, Blast_Score=211, Evalue=7e-55, Organism=Drosophila melanogaster, GI28575014, Length=368, Percent_Identity=32.8804347826087, Blast_Score=202, Evalue=3e-52, Organism=Drosophila melanogaster, GI24583281, Length=361, Percent_Identity=31.8559556786704, Blast_Score=200, Evalue=2e-51, Organism=Drosophila melanogaster, GI24583279, Length=361, Percent_Identity=31.8559556786704, Blast_Score=200, Evalue=2e-51, Organism=Drosophila melanogaster, GI18857967, Length=362, Percent_Identity=35.6353591160221, Blast_Score=198, Evalue=8e-51, Organism=Drosophila melanogaster, GI17136814, Length=365, Percent_Identity=34.2465753424658, Blast_Score=191, Evalue=1e-48, Organism=Drosophila melanogaster, GI24643725, Length=401, Percent_Identity=32.6683291770574, Blast_Score=190, Evalue=1e-48, Organism=Drosophila melanogaster, GI17977678, Length=358, Percent_Identity=33.7988826815642, Blast_Score=190, Evalue=2e-48, Organism=Drosophila melanogaster, GI24666101, Length=367, Percent_Identity=31.3351498637602, Blast_Score=185, Evalue=5e-47, Organism=Drosophila melanogaster, GI24645031, Length=360, Percent_Identity=31.1111111111111, Blast_Score=184, Evalue=1e-46, Organism=Drosophila melanogaster, GI24642822, Length=409, Percent_Identity=32.0293398533007, Blast_Score=180, Evalue=2e-45, Organism=Drosophila melanogaster, GI28571808, Length=372, Percent_Identity=33.3333333333333, Blast_Score=177, Evalue=9e-45, Organism=Drosophila melanogaster, GI28571809, Length=372, Percent_Identity=33.3333333333333, Blast_Score=177, Evalue=9e-45, Organism=Drosophila melanogaster, GI24582080, Length=380, Percent_Identity=30.5263157894737, Blast_Score=177, Evalue=1e-44, Organism=Drosophila melanogaster, GI24582078, Length=380, Percent_Identity=30.5263157894737, Blast_Score=177, Evalue=1e-44, Organism=Drosophila melanogaster, GI17136248, Length=380, Percent_Identity=30.5263157894737, Blast_Score=177, Evalue=1e-44, Organism=Drosophila melanogaster, GI24582075, Length=380, Percent_Identity=30.5263157894737, Blast_Score=177, Evalue=1e-44, Organism=Drosophila melanogaster, GI281365720, Length=318, Percent_Identity=35.2201257861635, Blast_Score=177, Evalue=1e-44, Organism=Drosophila melanogaster, GI24581954, Length=350, Percent_Identity=31.7142857142857, Blast_Score=171, Evalue=8e-43, Organism=Drosophila melanogaster, GI24581952, Length=350, Percent_Identity=31.7142857142857, Blast_Score=171, Evalue=8e-43, Organism=Drosophila melanogaster, GI24581956, Length=350, Percent_Identity=31.7142857142857, Blast_Score=171, Evalue=8e-43, Organism=Drosophila melanogaster, GI28571338, Length=445, Percent_Identity=29.2134831460674, Blast_Score=171, Evalue=1e-42, Organism=Drosophila melanogaster, GI18859659, Length=445, Percent_Identity=29.2134831460674, Blast_Score=171, Evalue=1e-42, Organism=Drosophila melanogaster, GI17647335, Length=356, Percent_Identity=31.1797752808989, Blast_Score=163, Evalue=3e-40, Organism=Drosophila melanogaster, GI21355559, Length=364, Percent_Identity=34.0659340659341, Blast_Score=162, Evalue=4e-40, Organism=Drosophila melanogaster, GI24668515, Length=358, Percent_Identity=30.7262569832402, Blast_Score=150, Evalue=1e-36, Organism=Drosophila melanogaster, GI20130173, Length=437, Percent_Identity=26.7734553775744, Blast_Score=144, Evalue=1e-34, Organism=Drosophila melanogaster, GI17136666, Length=426, Percent_Identity=27.2300469483568, Blast_Score=124, Evalue=1e-28, Organism=Drosophila melanogaster, GI19920478, Length=354, Percent_Identity=28.2485875706215, Blast_Score=117, Evalue=2e-26, Organism=Drosophila melanogaster, GI24640164, Length=377, Percent_Identity=23.342175066313, Blast_Score=110, Evalue=1e-24,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR014001 - InterPro: IPR011545 - InterPro: IPR001650 - InterPro: IPR014021 - InterPro: IPR000629 - InterPro: IPR014014 [H]
Pfam domain/function: PF00270 DEAD; PF00271 Helicase_C [H]
EC number: =3.6.4.13 [H]
Molecular weight: Translated: 49234; Mature: 49234
Theoretical pI: Translated: 10.46; Mature: 10.46
Prosite motif: PS00039 DEAD_ATP_HELICASE ; PS00041 HTH_ARAC_FAMILY_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFSQFALHERLLKAVAELKFVEPTPVQAAAIPLALQGRDLRVTAQTGSGKTAAFVLPILN CCCHHHHHHHHHHHHHHCCCCCCCCCCHHCCEEEECCCEEEEEEECCCCCHHHHHHHHHH RLIGPAKVRVSIKTLILLPTRELAQQTLKEVERFSQFTFIKSGLITGGEDFKVQAAMLRK HHCCCCEEEEEEEEEEEECCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHH VPDILIGTPGRMIEQLNAGNLDLKEVEVLVLDEADRMLDMGFAEDVQRLVDECPNRQQTM CCHHEECCCHHHHHHCCCCCCCHHHEEEEEECCCHHHHHCCHHHHHHHHHHHCCCCCCEE LFSATTGGSGLREMIAKVLNNPEHLQLNAVSQLNDTTRQQIITADHNQHKEQIVNWLLAN EEEECCCCHHHHHHHHHHHCCCCEEEEEHHHHHHHHHHHHEEECCCHHHHHHHHHHHHHC ETYQKAIVFTNTRAMADRIYGRLVAQEYKAFVLHGEKDQKDRKLAIDRLKQGGVKILVAT HHHHEEEEEECHHHHHHHHHHHHHHHHHHEEEEECCCCCHHHHHHHHHHHCCCEEEEEEE DVAARGLDVDGLDLVINFDMPRSGDEYVHRIGRTGRAGNDGLAISLICHGDWNLMSSIER CHHHCCCCCCCEEEEEEECCCCCCHHHHHHHCCCCCCCCCCEEEEEEEECCHHHHHHHHH YLKQSFERRTIKEVKGTYGGPKKVKASGKAVGVKKKKTDAKGDKKKTAAKTPTKRKSANR HHHHHHHHHHHHHHHCCCCCCCEECCCCCEECCCCCCCCCCCCCHHHHCCCCCHHCCCCC PKPDALVSSDGMAPLKRRKPAAPAAE CCCCCEECCCCCCCHHHCCCCCCCCC >Mature Secondary Structure MFSQFALHERLLKAVAELKFVEPTPVQAAAIPLALQGRDLRVTAQTGSGKTAAFVLPILN CCCHHHHHHHHHHHHHHCCCCCCCCCCHHCCEEEECCCEEEEEEECCCCCHHHHHHHHHH RLIGPAKVRVSIKTLILLPTRELAQQTLKEVERFSQFTFIKSGLITGGEDFKVQAAMLRK HHCCCCEEEEEEEEEEEECCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHH VPDILIGTPGRMIEQLNAGNLDLKEVEVLVLDEADRMLDMGFAEDVQRLVDECPNRQQTM CCHHEECCCHHHHHHCCCCCCCHHHEEEEEECCCHHHHHCCHHHHHHHHHHHCCCCCCEE LFSATTGGSGLREMIAKVLNNPEHLQLNAVSQLNDTTRQQIITADHNQHKEQIVNWLLAN EEEECCCCHHHHHHHHHHHCCCCEEEEEHHHHHHHHHHHHEEECCCHHHHHHHHHHHHHC ETYQKAIVFTNTRAMADRIYGRLVAQEYKAFVLHGEKDQKDRKLAIDRLKQGGVKILVAT HHHHEEEEEECHHHHHHHHHHHHHHHHHHEEEEECCCCCHHHHHHHHHHHCCCEEEEEEE DVAARGLDVDGLDLVINFDMPRSGDEYVHRIGRTGRAGNDGLAISLICHGDWNLMSSIER CHHHCCCCCCCEEEEEEECCCCCCHHHHHHHCCCCCCCCCCEEEEEEEECCHHHHHHHHH YLKQSFERRTIKEVKGTYGGPKKVKASGKAVGVKKKKTDAKGDKKKTAAKTPTKRKSANR HHHHHHHHHHHHHHHCCCCCCCEECCCCCEECCCCCCCCCCCCCHHHHCCCCCHHCCCCC PKPDALVSSDGMAPLKRRKPAAPAAE CCCCCEECCCCCCCHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8037924; 8905232; 9278503; 1931833; 10361280 [H]