Definition Pseudomonas fluorescens Pf0-1 chromosome, complete genome.
Accession NC_007492
Length 6,438,405

Click here to switch to the map view.

The map label for this gene is 77457669

Identifier: 77457669

GI number: 77457669

Start: 1616216

End: 1616608

Strand: Direct

Name: 77457669

Synonym: Pfl01_1442

Alternate gene names: NA

Gene position: 1616216-1616608 (Clockwise)

Preceding gene: 77457664

Following gene: 77457673

Centisome position: 25.1

GC content: 58.52

Gene sequence:

>393_bases
ATGACGACTTATAACTGGGATTTGATTGAACGCCTGCTGCATGAAGTGCAGAACGGCGCGGGCCACAGCTTTGCACCACG
GTCTTTTGCCGAAGACTATGCGGCGGAGAAAGCGGCGGCGGGCGAGCCGATCGAGAATCTGGATCACCTGAAAACGCTCG
CCTGCGACTATGAACAATTGCTGCTGTTGCGCGGTTACATCCAACCCCGTGGCGAAGACGAGGGCAGTACCGGCAACAAC
TTCAGCCTGACCCCTCGCGGCTCCAGTCTGCTGAGCCTGATCGACAGCAGCATTCCCGGCAACGATCATCCGCGCGAAGT
GCTGGATGATCAGGAAGACGCGCTGGATGAGCTGACGTTCGATGAGGTGGCCTCCAAGGCGCAGATTGCCTGA

Upstream 100 bases:

>100_bases
CGGTCGGTCGGGGCGCCGAATAATCCTGAACGGTGGCGCAGCGCTCCGGTCACAACCTTGAACGCGCCAAAAAATCATGC
GCACCGGAGGTTGAATCAGG

Downstream 100 bases:

>100_bases
GGCTTTGCACAAAAAAATGTGGGAGCGACCTTGCTCGCTCCCACATGGTTTTTTCGGTGTTCTCAGCTTTTTTGTGCGGC
CTTCAGGCACTTCAAGTCAT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 130; Mature: 129

Protein sequence:

>130_residues
MTTYNWDLIERLLHEVQNGAGHSFAPRSFAEDYAAEKAAAGEPIENLDHLKTLACDYEQLLLLRGYIQPRGEDEGSTGNN
FSLTPRGSSLLSLIDSSIPGNDHPREVLDDQEDALDELTFDEVASKAQIA

Sequences:

>Translated_130_residues
MTTYNWDLIERLLHEVQNGAGHSFAPRSFAEDYAAEKAAAGEPIENLDHLKTLACDYEQLLLLRGYIQPRGEDEGSTGNN
FSLTPRGSSLLSLIDSSIPGNDHPREVLDDQEDALDELTFDEVASKAQIA
>Mature_129_residues
TTYNWDLIERLLHEVQNGAGHSFAPRSFAEDYAAEKAAAGEPIENLDHLKTLACDYEQLLLLRGYIQPRGEDEGSTGNNF
SLTPRGSSLLSLIDSSIPGNDHPREVLDDQEDALDELTFDEVASKAQIA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 14333; Mature: 14202

Theoretical pI: Translated: 4.06; Mature: 4.06

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
0.8 %Met     (Translated Protein)
1.5 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
0.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTTYNWDLIERLLHEVQNGAGHSFAPRSFAEDYAAEKAAAGEPIENLDHLKTLACDYEQL
CCCCCHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCHHHH
LLLRGYIQPRGEDEGSTGNNFSLTPRGSSLLSLIDSSIPGNDHPREVLDDQEDALDELTF
HHHHHHCCCCCCCCCCCCCCCEECCCCHHHHHHHHHCCCCCCCCHHHHCCHHHHHHHHHH
DEVASKAQIA
HHHHHHHCCC
>Mature Secondary Structure 
TTYNWDLIERLLHEVQNGAGHSFAPRSFAEDYAAEKAAAGEPIENLDHLKTLACDYEQL
CCCCHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCHHHH
LLLRGYIQPRGEDEGSTGNNFSLTPRGSSLLSLIDSSIPGNDHPREVLDDQEDALDELTF
HHHHHHCCCCCCCCCCCCCCCEECCCCHHHHHHHHHCCCCCCCCHHHHCCHHHHHHHHHH
DEVASKAQIA
HHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA