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The map label for this gene is ycaC [H]

Identifier: 77457662

GI number: 77457662

Start: 1609907

End: 1610548

Strand: Direct

Name: ycaC [H]

Synonym: Pfl01_1435

Alternate gene names: 77457662

Gene position: 1609907-1610548 (Clockwise)

Preceding gene: 77457660

Following gene: 77457664

Centisome position: 25.0

GC content: 60.75

Gene sequence:

>642_bases
ATGTCTATCCGTGAACTGCTGAACCCAACCAACTCCGCCCTGATCCTGATCGACCACCAGCCGCAAATGGCTTTCGGCGT
GCAGTCGATCGACCGTCAGACCCTGAAGAACAACACCGTCGGCCTGGCCAAGGCCGCGAAGATCTTCAACGTACCGACCA
TCTACACCTCGGTCGAAACCGAAAGCTTCAGCGGCTACATCTGGCCGGAACTGCTGGCGGTGCACCCGGAGCAGAAACCG
ATCGAGCGCACCTCGATGAACTCCTGGGAAGACAAGGCGCTGGTTGACGCGGTGAAGGCCACCGGGCGCAAGAAACTGAT
CATCGCCGCACTGTGGACCGAGGTCTGCCTGACCTTCCCGGCTCTGGAAGCTTTGGCTGAAGGCTACGAGGTGTACATCG
TCACTGACGCGTCCGGCGGCACTACCAAAGAAGCCCACGACATGTCGGTACAGCGGATGATTCAGGCCGGCGCGGTGCCG
GTGACCTGGCAGCAAGTGCTGCTCGAGTACCAGCGTGACTGGGCGCACAAAGATACTTATCAAGCGGTGATGGACCTGGT
GCTGGAACACAGCGGCGCATACGGCATGGGCGTCGACTACGCCTACACCATGGTGCACAAGGCACCGCAGCGGCAGGCCT
GA

Upstream 100 bases:

>100_bases
AGTGACATCCAAGCCGAGACAACAACGCCGCAGACGGCAAAGCGCCTCGACTCACCAATACCTAATCGAAACTTTGAATC
GACATCAAAAGGAACGCGCC

Downstream 100 bases:

>100_bases
TAAATCGGCGGGAAAAAAAGACGCAACCAAGGTTGCGTCTTTTTTTGCATTTGAAGAAAGCGCTACATCAGATGTTTTTC
GGCTTCTGGAATGTGGCTCG

Product: isochorismatase hydrolase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 213; Mature: 212

Protein sequence:

>213_residues
MSIRELLNPTNSALILIDHQPQMAFGVQSIDRQTLKNNTVGLAKAAKIFNVPTIYTSVETESFSGYIWPELLAVHPEQKP
IERTSMNSWEDKALVDAVKATGRKKLIIAALWTEVCLTFPALEALAEGYEVYIVTDASGGTTKEAHDMSVQRMIQAGAVP
VTWQQVLLEYQRDWAHKDTYQAVMDLVLEHSGAYGMGVDYAYTMVHKAPQRQA

Sequences:

>Translated_213_residues
MSIRELLNPTNSALILIDHQPQMAFGVQSIDRQTLKNNTVGLAKAAKIFNVPTIYTSVETESFSGYIWPELLAVHPEQKP
IERTSMNSWEDKALVDAVKATGRKKLIIAALWTEVCLTFPALEALAEGYEVYIVTDASGGTTKEAHDMSVQRMIQAGAVP
VTWQQVLLEYQRDWAHKDTYQAVMDLVLEHSGAYGMGVDYAYTMVHKAPQRQA
>Mature_212_residues
SIRELLNPTNSALILIDHQPQMAFGVQSIDRQTLKNNTVGLAKAAKIFNVPTIYTSVETESFSGYIWPELLAVHPEQKPI
ERTSMNSWEDKALVDAVKATGRKKLIIAALWTEVCLTFPALEALAEGYEVYIVTDASGGTTKEAHDMSVQRMIQAGAVPV
TWQQVLLEYQRDWAHKDTYQAVMDLVLEHSGAYGMGVDYAYTMVHKAPQRQA

Specific function: Unknown

COG id: COG1335

COG function: function code Q; Amidases related to nicotinamidase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1787124, Length=169, Percent_Identity=42.603550295858, Blast_Score=137, Evalue=6e-34,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000868 [H]

Pfam domain/function: PF00857 Isochorismatase [H]

EC number: NA

Molecular weight: Translated: 23756; Mature: 23625

Theoretical pI: Translated: 5.59; Mature: 5.59

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSIRELLNPTNSALILIDHQPQMAFGVQSIDRQTLKNNTVGLAKAAKIFNVPTIYTSVET
CCHHHHCCCCCCEEEEEECCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCEEEEECCC
ESFSGYIWPELLAVHPEQKPIERTSMNSWEDKALVDAVKATGRKKLIIAALWTEVCLTFP
CCCCCCCCHHHHEECCCCCCCHHHCCCCCHHHHHHHHHHHCCCCEEHHHHHHHHHHHHHH
ALEALAEGYEVYIVTDASGGTTKEAHDMSVQRMIQAGAVPVTWQQVLLEYQRDWAHKDTY
HHHHHHCCEEEEEEEECCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCHHH
QAVMDLVLEHSGAYGMGVDYAYTMVHKAPQRQA
HHHHHHHHHCCCCCCCCHHHHHHHHHCCCCCCC
>Mature Secondary Structure 
SIRELLNPTNSALILIDHQPQMAFGVQSIDRQTLKNNTVGLAKAAKIFNVPTIYTSVET
CHHHHCCCCCCEEEEEECCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCEEEEECCC
ESFSGYIWPELLAVHPEQKPIERTSMNSWEDKALVDAVKATGRKKLIIAALWTEVCLTFP
CCCCCCCCHHHHEECCCCCCCHHHCCCCCHHHHHHHHHHHCCCCEEHHHHHHHHHHHHHH
ALEALAEGYEVYIVTDASGGTTKEAHDMSVQRMIQAGAVPVTWQQVLLEYQRDWAHKDTY
HHHHHHCCEEEEEEEECCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCHHH
QAVMDLVLEHSGAYGMGVDYAYTMVHKAPQRQA
HHHHHHHHHCCCCCCCCHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 3062312; 8905232; 9278503; 9782055 [H]