Click here to switch to the map view.

The map label for this gene is yvaQ [H]

Identifier: 77457645

GI number: 77457645

Start: 1588471

End: 1590096

Strand: Reverse

Name: yvaQ [H]

Synonym: Pfl01_1418

Alternate gene names: 77457645

Gene position: 1590096-1588471 (Counterclockwise)

Preceding gene: 77457651

Following gene: 77457644

Centisome position: 24.7

GC content: 63.35

Gene sequence:

>1626_bases
ATGACTATCCGGAATCTGCGCATCGGTTTGCGCGCCAGTTTGTGTTTTGCCGTTCTGGCCAGTCTGCTGGTGGTGGTCGG
CCTGTTCGGTCTGGGCCAGATGAAAACCCTGCGCGAGAGCGCGGCGGTGATCGAGGAAGCATGGATGCCCAGCATCGAAA
GCATCCATGACACAGCGGCGAACATCGCCAGCATCCGTCTCGAATCCCTGCGCCTGATCACCAGCACCCAGGCTGCCGTG
CGCGAACGCAGCAAAGGCCTTCTCACGGCGCAACGCCAGGAGTTGCTCAAGCGCCTCGACGATCACAAAGCCCTGATCGC
CAACGATCAGGAACAGGCGATGCTGGAAGGACTGAGCGCGGACACCGCCAAGTACCTGAGCATCCTTGACCAGATCATCA
AACAGATCGACGCCGGACAAAACGATCAGGCCTACGCGCGCCTGACCAATGAACTGGCGCCCCAGGGCACGGTGCTCGAC
AAAACGCTGGAGCAAATGATCACGCTCAACCAACAAGGCGCGGATACCGCCGCCAAGTCCGCGGCGGCGATGTACCAGCA
GGCGCTGTGGATCGTCGCGATGATCATCGTCATTGCGCTGATTGCCACGTTGCTGCTGGCCTGGTTGCTGACCCGCAGCA
TCACCGCGCCGATCAATCAGGCGCTGAACGTGGCACGACGGATTGCTTCGGGAGACCTCAGCGGTCGCATCGACAGCAAC
GGCAAGGATGAAGCGGCGCAGTTGCTGATCGCTCTGGCCGAGATGCAGAGCAATCTGCGCTCGACCATTCGCGGCATCAG
CGAGTCGGCCCAGCAACTGGCCTCCGCCGCCGAGGAAATGAGTTCGGTGATGGAACAGAGCACCCGCGGCCTGCAACAGC
AGAATGACCAGATCGAACAGGCTGCCACGGCGGTCACCGAGATGAGCACGGCGGTCGATGAGGTGGCCGCCAATGCGGTG
TCCAGTGCCGAAGCCTCCGAAGCCTCGAACGAGGACAGCAAGCACGGGCATGTGCAGGTCAGCGAGACCATCAGTTCGAT
TCAGGAATTGGTCAGCGCAGTGCTGGGTGCGTCCGAACAGGCCGAGGGCCTGGCGACTCAGGCCCAGGACATCAGCAAGG
TACTGGAGGTGATTCGCGGCATCGCCGGGCAGACCAACCTGCTGGCACTCAACGCCGCCATTGAAGCGGCGCGGGCCGGC
GAGGCCGGACGAGGGTTTGCGGTGGTCGCCGATGAAGTCCGCTCGCTGGCCCAGCGCACGCAGAACTCCACCGAAGAAAT
CGAGCTGATGATCAGCAGCATTCAGCAAGGCACCAGCGCCACCGTCGGCGCTTTGCAATCCAGCGCCGAGCAGGCCAGCC
ACACCCTGCGCCGGGCCAACAGCGCCGGCCAGGCCCTGGAGAAAATCACCGCGTCGATCTCGCAGATCAACCAGCGCAAC
CTGGTGATCGCCAGCGCCGCCGAGCAGCAGGCGCTGGTGGCGCGGGAAGTCGATCAGAATCTGGTGACCATCCGCGACCT
GTCGACCCAGACCGCTGCCGGCGCCACCCAGACGTCTGCCGCCAGCCAGGAACTGTCGCGACTGGCCGTAGACCTCAACG
GGCTGGTGACGCGCTTCGTGATCTGA

Upstream 100 bases:

>100_bases
GATAGTGGCACTTTGATATACAGCCCGCCATCACCCGCCTCACAACAAGATCCTCGGCTCACGAGGACGACCTCTCCCCA
AATGCCCAAGGAGCACATTG

Downstream 100 bases:

>100_bases
TCAGAAAATTAAATGCCCGATTAACGGTTGCCATCGCCGGGGCCCTCGGCAACACTCTCGTCCCGATCAAGGAAGGAGTG
GCCCGTGAGCCCTGTCGATA

Product: chemotaxis sensory transducer

Products: NA

Alternate protein names: Methyl-accepting chemotaxis protein [H]

Number of amino acids: Translated: 541; Mature: 540

Protein sequence:

>541_residues
MTIRNLRIGLRASLCFAVLASLLVVVGLFGLGQMKTLRESAAVIEEAWMPSIESIHDTAANIASIRLESLRLITSTQAAV
RERSKGLLTAQRQELLKRLDDHKALIANDQEQAMLEGLSADTAKYLSILDQIIKQIDAGQNDQAYARLTNELAPQGTVLD
KTLEQMITLNQQGADTAAKSAAAMYQQALWIVAMIIVIALIATLLLAWLLTRSITAPINQALNVARRIASGDLSGRIDSN
GKDEAAQLLIALAEMQSNLRSTIRGISESAQQLASAAEEMSSVMEQSTRGLQQQNDQIEQAATAVTEMSTAVDEVAANAV
SSAEASEASNEDSKHGHVQVSETISSIQELVSAVLGASEQAEGLATQAQDISKVLEVIRGIAGQTNLLALNAAIEAARAG
EAGRGFAVVADEVRSLAQRTQNSTEEIELMISSIQQGTSATVGALQSSAEQASHTLRRANSAGQALEKITASISQINQRN
LVIASAAEQQALVAREVDQNLVTIRDLSTQTAAGATQTSAASQELSRLAVDLNGLVTRFVI

Sequences:

>Translated_541_residues
MTIRNLRIGLRASLCFAVLASLLVVVGLFGLGQMKTLRESAAVIEEAWMPSIESIHDTAANIASIRLESLRLITSTQAAV
RERSKGLLTAQRQELLKRLDDHKALIANDQEQAMLEGLSADTAKYLSILDQIIKQIDAGQNDQAYARLTNELAPQGTVLD
KTLEQMITLNQQGADTAAKSAAAMYQQALWIVAMIIVIALIATLLLAWLLTRSITAPINQALNVARRIASGDLSGRIDSN
GKDEAAQLLIALAEMQSNLRSTIRGISESAQQLASAAEEMSSVMEQSTRGLQQQNDQIEQAATAVTEMSTAVDEVAANAV
SSAEASEASNEDSKHGHVQVSETISSIQELVSAVLGASEQAEGLATQAQDISKVLEVIRGIAGQTNLLALNAAIEAARAG
EAGRGFAVVADEVRSLAQRTQNSTEEIELMISSIQQGTSATVGALQSSAEQASHTLRRANSAGQALEKITASISQINQRN
LVIASAAEQQALVAREVDQNLVTIRDLSTQTAAGATQTSAASQELSRLAVDLNGLVTRFVI
>Mature_540_residues
TIRNLRIGLRASLCFAVLASLLVVVGLFGLGQMKTLRESAAVIEEAWMPSIESIHDTAANIASIRLESLRLITSTQAAVR
ERSKGLLTAQRQELLKRLDDHKALIANDQEQAMLEGLSADTAKYLSILDQIIKQIDAGQNDQAYARLTNELAPQGTVLDK
TLEQMITLNQQGADTAAKSAAAMYQQALWIVAMIIVIALIATLLLAWLLTRSITAPINQALNVARRIASGDLSGRIDSNG
KDEAAQLLIALAEMQSNLRSTIRGISESAQQLASAAEEMSSVMEQSTRGLQQQNDQIEQAATAVTEMSTAVDEVAANAVS
SAEASEASNEDSKHGHVQVSETISSIQELVSAVLGASEQAEGLATQAQDISKVLEVIRGIAGQTNLLALNAAIEAARAGE
AGRGFAVVADEVRSLAQRTQNSTEEIELMISSIQQGTSATVGALQSSAEQASHTLRRANSAGQALEKITASISQINQRNL
VIASAAEQQALVAREVDQNLVTIRDLSTQTAAGATQTSAASQELSRLAVDLNGLVTRFVI

Specific function: Chemotactic-signal transducers respond to changes in the concentration of attractants and repellents in the environment, transduce a signal from the outside to the inside of the cell, and facilitate sensory adaptation through the variation of the level of

COG id: COG0840

COG function: function code NT; Methyl-accepting chemotaxis protein

Gene ontology:

Cell location: Cell membrane; Single-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 methyl-accepting transducer domain [H]

Homologues:

Organism=Escherichia coli, GI2367378, Length=378, Percent_Identity=30.1587301587302, Blast_Score=146, Evalue=4e-36,
Organism=Escherichia coli, GI1788194, Length=427, Percent_Identity=28.8056206088993, Blast_Score=130, Evalue=2e-31,
Organism=Escherichia coli, GI1787690, Length=345, Percent_Identity=30.7246376811594, Blast_Score=122, Evalue=5e-29,
Organism=Escherichia coli, GI1788195, Length=294, Percent_Identity=28.2312925170068, Blast_Score=112, Evalue=8e-26,
Organism=Escherichia coli, GI1789453, Length=328, Percent_Identity=29.2682926829268, Blast_Score=103, Evalue=3e-23,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004090
- InterPro:   IPR004089
- InterPro:   IPR003660 [H]

Pfam domain/function: PF00672 HAMP; PF00015 MCPsignal [H]

EC number: NA

Molecular weight: Translated: 57407; Mature: 57275

Theoretical pI: Translated: 4.60; Mature: 4.60

Prosite motif: PS50885 HAMP ; PS50111 CHEMOTAXIS_TRANSDUC_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTIRNLRIGLRASLCFAVLASLLVVVGLFGLGQMKTLRESAAVIEEAWMPSIESIHDTAA
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHH
NIASIRLESLRLITSTQAAVRERSKGLLTAQRQELLKRLDDHKALIANDQEQAMLEGLSA
HHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCHHHHCCCHHHHHHHCCCH
DTAKYLSILDQIIKQIDAGQNDQAYARLTNELAPQGTVLDKTLEQMITLNQQGADTAAKS
HHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCHHHHHH
AAAMYQQALWIVAMIIVIALIATLLLAWLLTRSITAPINQALNVARRIASGDLSGRIDSN
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC
GKDEAAQLLIALAEMQSNLRSTIRGISESAQQLASAAEEMSSVMEQSTRGLQQQNDQIEQ
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AATAVTEMSTAVDEVAANAVSSAEASEASNEDSKHGHVQVSETISSIQELVSAVLGASEQ
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEHHHHHHHHHHHHHHHHCCCHH
AEGLATQAQDISKVLEVIRGIAGQTNLLALNAAIEAARAGEAGRGFAVVADEVRSLAQRT
HHHHHHHHHHHHHHHHHHHCCCCCCHHEEHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHH
QNSTEEIELMISSIQQGTSATVGALQSSAEQASHTLRRANSAGQALEKITASISQINQRN
CCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
LVIASAAEQQALVAREVDQNLVTIRDLSTQTAAGATQTSAASQELSRLAVDLNGLVTRFV
EEEEECHHHHHHHHHHHHCCCEEHHHCCHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHC
I
C
>Mature Secondary Structure 
TIRNLRIGLRASLCFAVLASLLVVVGLFGLGQMKTLRESAAVIEEAWMPSIESIHDTAA
CCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHH
NIASIRLESLRLITSTQAAVRERSKGLLTAQRQELLKRLDDHKALIANDQEQAMLEGLSA
HHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCHHHHCCCHHHHHHHCCCH
DTAKYLSILDQIIKQIDAGQNDQAYARLTNELAPQGTVLDKTLEQMITLNQQGADTAAKS
HHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCHHHHHH
AAAMYQQALWIVAMIIVIALIATLLLAWLLTRSITAPINQALNVARRIASGDLSGRIDSN
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC
GKDEAAQLLIALAEMQSNLRSTIRGISESAQQLASAAEEMSSVMEQSTRGLQQQNDQIEQ
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AATAVTEMSTAVDEVAANAVSSAEASEASNEDSKHGHVQVSETISSIQELVSAVLGASEQ
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEHHHHHHHHHHHHHHHHCCCHH
AEGLATQAQDISKVLEVIRGIAGQTNLLALNAAIEAARAGEAGRGFAVVADEVRSLAQRT
HHHHHHHHHHHHHHHHHHHCCCCCCHHEEHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHH
QNSTEEIELMISSIQQGTSATVGALQSSAEQASHTLRRANSAGQALEKITASISQINQRN
CCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
LVIASAAEQQALVAREVDQNLVTIRDLSTQTAAGATQTSAASQELSRLAVDLNGLVTRFV
EEEEECHHHHHHHHHHHHCCCEEHHHCCHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHC
I
C

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]