| Definition | Pseudomonas fluorescens Pf0-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007492 |
| Length | 6,438,405 |
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The map label for this gene is 77457651
Identifier: 77457651
GI number: 77457651
Start: 1598810
End: 1600132
Strand: Reverse
Name: 77457651
Synonym: Pfl01_1424
Alternate gene names: NA
Gene position: 1600132-1598810 (Counterclockwise)
Preceding gene: 77457653
Following gene: 77457645
Centisome position: 24.85
GC content: 59.79
Gene sequence:
>1323_bases ATGCGTCTTGCTTCCACGAAAACTGCGGCGGCCCTGTGCGGTGGCCTGTTGCTGGCCATGAGTGTACCGGCCAGTGCCGC AGTCGACGCCAAACTGCTCGACATGCTCAAGGCTAACGGTTCGATTTCCCAGGCGCAGTACGTTGAACTGCAAACTGAAC TGGCCAAGGATCAGAAGGCCCAGCAAATCGCGCAGCAGGCGCAGCAAGAGACCAACGAGCAAATCGCGGCGACCGCGAAG AAAACCAACGAGCTCAGCAGTTTCGACCAGAAACTGGCCTGGGCCGCCAAGACCCAGTTCAAGGGCGATGTGCGTATCCG TCAGGAAACCATCAAGATCGACGGCGAACCGAACAACGGCGGCCGCGACAAGGATCGCCAGCGTATCCGTGCCCGTCTGG GTGCGTACACTGAGATCAACCCGCAAGTCGACACCGGCATCCGTATCGCCACCGGCGGCGGCGACGACGCCCGTTCGACC AACCAGGACCAGGACAACTACTTCGACAAGAAGCAGATCTGGCTCGACCTGGGCTACATCGACTACCACCCGGATCAGAT CAAGAACCTGCACATCATCGGCGGCAAGATGCTGCAACCGTGGGTGAGCATGGGCGACGTGATCTGGGACAGCGACATCA ACCCGGAAGGTCTGGCCGTTACCTACAAGTATCCATTGGGCAGCAGCGTGGAGCTGTTCGGCAGCCTGGGTAACTACAAT CTCAAGGACAACGTGGATGGCGACGGCGTGCAATTCCGTCATGACCTGCGTCTGACCGCCGGCCAGTTGGGCAGCCGCTT CGCCATCACCGACAACCTGAAACTGACCCTGGGCGGCAGCGTCTACGCCTACCAGAACGACGAAGACAGCCGTTGCACCG GCACCTCCACGCCGTGCGCCCTGGCCGTCAACGGCAACTCGGCGAACAACGAATTCCGTCTGTACGAAGGCTTCAGCCAG GTCGACATCGGCGGCCTGCCAATGCCGCTGTCGTTCTACGGTCAGTATGTGAAGAACAACGATGCAGTGACCGATCAGGA CACCGCATGGCTGGTGGGTGCCAAGTCGAAAGTCTTCGGCCTGAACCTCGACTACAACTATCGTGATGTGCAGCGCAACG CTGTGGTCGGCGCCTTCACCGATTCGGACTTCGCCAACGGCACCACCGGTTCCCGTGGCCACAAGTTCAAGGTCGGTTAC GACATCGACAAGAACTTCGCCATTGGTGCGACTTACTTCCTGACCAAGGCCGACTTCTCCAGCCGTACCCAGCGTGATGC AGACACCAACACCCTGCAGCTGGACGCGGAAGCGAAGTTCTAA
Upstream 100 bases:
>100_bases AGAGCGCCGGGTTCTACCCCGGACACTGTTTTCCGACCGTCAAACCGTCGGTTGTGCCCAGGATGGTTCAGCCATCCCCT TTTCATCTTCGGAGATTGCT
Downstream 100 bases:
>100_bases GCAACCCGGCAACAGACTTCAAACGATGGGTTGTACATCCGGTTCCATCGTTTGAAGAGGCTTCAACAGACTGGCGCGAC CGCAGCGATCCCCATCATCC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 440; Mature: 440
Protein sequence:
>440_residues MRLASTKTAAALCGGLLLAMSVPASAAVDAKLLDMLKANGSISQAQYVELQTELAKDQKAQQIAQQAQQETNEQIAATAK KTNELSSFDQKLAWAAKTQFKGDVRIRQETIKIDGEPNNGGRDKDRQRIRARLGAYTEINPQVDTGIRIATGGGDDARST NQDQDNYFDKKQIWLDLGYIDYHPDQIKNLHIIGGKMLQPWVSMGDVIWDSDINPEGLAVTYKYPLGSSVELFGSLGNYN LKDNVDGDGVQFRHDLRLTAGQLGSRFAITDNLKLTLGGSVYAYQNDEDSRCTGTSTPCALAVNGNSANNEFRLYEGFSQ VDIGGLPMPLSFYGQYVKNNDAVTDQDTAWLVGAKSKVFGLNLDYNYRDVQRNAVVGAFTDSDFANGTTGSRGHKFKVGY DIDKNFAIGATYFLTKADFSSRTQRDADTNTLQLDAEAKF
Sequences:
>Translated_440_residues MRLASTKTAAALCGGLLLAMSVPASAAVDAKLLDMLKANGSISQAQYVELQTELAKDQKAQQIAQQAQQETNEQIAATAK KTNELSSFDQKLAWAAKTQFKGDVRIRQETIKIDGEPNNGGRDKDRQRIRARLGAYTEINPQVDTGIRIATGGGDDARST NQDQDNYFDKKQIWLDLGYIDYHPDQIKNLHIIGGKMLQPWVSMGDVIWDSDINPEGLAVTYKYPLGSSVELFGSLGNYN LKDNVDGDGVQFRHDLRLTAGQLGSRFAITDNLKLTLGGSVYAYQNDEDSRCTGTSTPCALAVNGNSANNEFRLYEGFSQ VDIGGLPMPLSFYGQYVKNNDAVTDQDTAWLVGAKSKVFGLNLDYNYRDVQRNAVVGAFTDSDFANGTTGSRGHKFKVGY DIDKNFAIGATYFLTKADFSSRTQRDADTNTLQLDAEAKF >Mature_440_residues MRLASTKTAAALCGGLLLAMSVPASAAVDAKLLDMLKANGSISQAQYVELQTELAKDQKAQQIAQQAQQETNEQIAATAK KTNELSSFDQKLAWAAKTQFKGDVRIRQETIKIDGEPNNGGRDKDRQRIRARLGAYTEINPQVDTGIRIATGGGDDARST NQDQDNYFDKKQIWLDLGYIDYHPDQIKNLHIIGGKMLQPWVSMGDVIWDSDINPEGLAVTYKYPLGSSVELFGSLGNYN LKDNVDGDGVQFRHDLRLTAGQLGSRFAITDNLKLTLGGSVYAYQNDEDSRCTGTSTPCALAVNGNSANNEFRLYEGFSQ VDIGGLPMPLSFYGQYVKNNDAVTDQDTAWLVGAKSKVFGLNLDYNYRDVQRNAVVGAFTDSDFANGTTGSRGHKFKVGY DIDKNFAIGATYFLTKADFSSRTQRDADTNTLQLDAEAKF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 48253; Mature: 48253
Theoretical pI: Translated: 5.05; Mature: 5.05
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRLASTKTAAALCGGLLLAMSVPASAAVDAKLLDMLKANGSISQAQYVELQTELAKDQKA CCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHH QQIAQQAQQETNEQIAATAKKTNELSSFDQKLAWAAKTQFKGDVRIRQETIKIDGEPNNG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEEEECCCCCCC GRDKDRQRIRARLGAYTEINPQVDTGIRIATGGGDDARSTNQDQDNYFDKKQIWLDLGYI CCCHHHHHHHHHHCCCEECCCCCCCCEEEEECCCCCCCCCCCCHHHCCCCEEEEEEECCE DYHPDQIKNLHIIGGKMLQPWVSMGDVIWDSDINPEGLAVTYKYPLGSSVELFGSLGNYN ECCHHHHCEEEEECCHHHHHHHHHCCEEECCCCCCCCEEEEEECCCCCCHHHHCCCCCCC LKDNVDGDGVQFRHDLRLTAGQLGSRFAITDNLKLTLGGSVYAYQNDEDSRCTGTSTPCA CCCCCCCCCEEEEEEEEEEHHCCCCEEEEECCEEEEECCEEEEEECCCCCCCCCCCCCEE LAVNGNSANNEFRLYEGFSQVDIGGLPMPLSFYGQYVKNNDAVTDQDTAWLVGAKSKVFG EEECCCCCCCCEEEECCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCEEEEECCCEEEE LNLDYNYRDVQRNAVVGAFTDSDFANGTTGSRGHKFKVGYDIDKNFAIGATYFLTKADFS EECCCCHHHHCCCEEEEEECCCCCCCCCCCCCCCEEEEEECCCCCEEEEEEEEEEECCCC SRTQRDADTNTLQLDAEAKF CCCCCCCCCCEEEEEECCCC >Mature Secondary Structure MRLASTKTAAALCGGLLLAMSVPASAAVDAKLLDMLKANGSISQAQYVELQTELAKDQKA CCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHH QQIAQQAQQETNEQIAATAKKTNELSSFDQKLAWAAKTQFKGDVRIRQETIKIDGEPNNG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEEEECCCCCCC GRDKDRQRIRARLGAYTEINPQVDTGIRIATGGGDDARSTNQDQDNYFDKKQIWLDLGYI CCCHHHHHHHHHHCCCEECCCCCCCCEEEEECCCCCCCCCCCCHHHCCCCEEEEEEECCE DYHPDQIKNLHIIGGKMLQPWVSMGDVIWDSDINPEGLAVTYKYPLGSSVELFGSLGNYN ECCHHHHCEEEEECCHHHHHHHHHCCEEECCCCCCCCEEEEEECCCCCCHHHHCCCCCCC LKDNVDGDGVQFRHDLRLTAGQLGSRFAITDNLKLTLGGSVYAYQNDEDSRCTGTSTPCA CCCCCCCCCEEEEEEEEEEHHCCCCEEEEECCEEEEECCEEEEEECCCCCCCCCCCCCEE LAVNGNSANNEFRLYEGFSQVDIGGLPMPLSFYGQYVKNNDAVTDQDTAWLVGAKSKVFG EEECCCCCCCCEEEECCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCEEEEECCCEEEE LNLDYNYRDVQRNAVVGAFTDSDFANGTTGSRGHKFKVGYDIDKNFAIGATYFLTKADFS EECCCCHHHHCCCEEEEEECCCCCCCCCCCCCCCEEEEEECCCCCEEEEEEEEEEECCCC SRTQRDADTNTLQLDAEAKF CCCCCCCCCCEEEEEECCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA