| Definition | Pseudomonas fluorescens Pf0-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007492 |
| Length | 6,438,405 |
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The map label for this gene is hisQ [H]
Identifier: 77457436
GI number: 77457436
Start: 1380804
End: 1381532
Strand: Reverse
Name: hisQ [H]
Synonym: Pfl01_1209
Alternate gene names: 77457436
Gene position: 1381532-1380804 (Counterclockwise)
Preceding gene: 77457437
Following gene: 77457435
Centisome position: 21.46
GC content: 60.77
Gene sequence:
>729_bases ATGTTCGAAACCCTCTTACAAAATCTGGGGCTCTCCGCCTTCAGCCTCAAGGGCTTTGGCCCGTTGCTGTTGGAAGGCAC CTGGATGACCATCAAATTGTCGGCGTTGTCGCTGCTGGTGGCCGTGTTGCTCGGCCTGCTCGGCGCCAGTGCCAAGCTGT CAAAAATCAAGCTGCTGCGCCTGCCCGCCCAGCTCTACACCACGCTGATTCGCGGGGTGCCGGACCTGGTGCTGATGCTG CTGATCTTCTACAGCCTGCAAACCTGGCTGACGACGCTCACCGATTACCTGGAATGGGAATACATCGAGATCGACCCGTT CAGTGCCGGGGTCCTGACCCTGGGCTTCATTTATGGCGCGTACTTCACTGAAACCTTTCGCGGGGCGATTCTCGCCGTGC CGCGCGGTCAGGTCGAAGCCGCCACCGCCTATGGTCTCAAGCGCGGCCAGCGCTTTCGCTTCGTGGTGTTCCCGCAAATG ATGCGCTTCGCCCTGCCGGGCATCGGCAACAACTGGATGGTGATGCTCAAGGCCACCGCGCTGGTTTCGATCATCGGCCT GGCCGATCTGGTCAAGGCCGCACAGGACGCCGGCAAGAGCACCTATCAGCTGTTTTACTTCCTGGTGCTCGCCGCGTTGA TTTACCTGCTCATCACCAGTGCCTCGAACTTCATCCTGCGCTGGCTCGAACGCCGCTACGCCGCCGGTGCAAGGGAGGCC GTACGATGA
Upstream 100 bases:
>100_bases AAAAGAAACACTTTGGCGATCTGAATCTGTACAGCGGCAAATAATGCCCCGGCGCCCATCCTCGATGGGCGCCTTTTTCA TTCAGTCAGGTTGCTGATTT
Downstream 100 bases:
>100_bases TCGAACTCCTGCAGGAATACTGGAAAGCCTTCCTTTATACCGACGGTCAGAACATCACTGGTCTTGCGATGACGATGTGG CTGCTCAGCGCCTCGATCTT
Product: amino acid ABC transporter permease
Products: ADP; phosphate; L-histidine [Cytoplasm]; ADP; L-ornithine [Cytoplasm]; L-arginine [Cytoplasm]; L-lysine [Cytoplasm] [C]
Alternate protein names: NA
Number of amino acids: Translated: 242; Mature: 242
Protein sequence:
>242_residues MFETLLQNLGLSAFSLKGFGPLLLEGTWMTIKLSALSLLVAVLLGLLGASAKLSKIKLLRLPAQLYTTLIRGVPDLVLML LIFYSLQTWLTTLTDYLEWEYIEIDPFSAGVLTLGFIYGAYFTETFRGAILAVPRGQVEAATAYGLKRGQRFRFVVFPQM MRFALPGIGNNWMVMLKATALVSIIGLADLVKAAQDAGKSTYQLFYFLVLAALIYLLITSASNFILRWLERRYAAGAREA VR
Sequences:
>Translated_242_residues MFETLLQNLGLSAFSLKGFGPLLLEGTWMTIKLSALSLLVAVLLGLLGASAKLSKIKLLRLPAQLYTTLIRGVPDLVLML LIFYSLQTWLTTLTDYLEWEYIEIDPFSAGVLTLGFIYGAYFTETFRGAILAVPRGQVEAATAYGLKRGQRFRFVVFPQM MRFALPGIGNNWMVMLKATALVSIIGLADLVKAAQDAGKSTYQLFYFLVLAALIYLLITSASNFILRWLERRYAAGAREA VR >Mature_242_residues MFETLLQNLGLSAFSLKGFGPLLLEGTWMTIKLSALSLLVAVLLGLLGASAKLSKIKLLRLPAQLYTTLIRGVPDLVLML LIFYSLQTWLTTLTDYLEWEYIEIDPFSAGVLTLGFIYGAYFTETFRGAILAVPRGQVEAATAYGLKRGQRFRFVVFPQM MRFALPGIGNNWMVMLKATALVSIIGLADLVKAAQDAGKSTYQLFYFLVLAALIYLLITSASNFILRWLERRYAAGAREA VR
Specific function: Part of the binding-protein-dependent transport system for histidine; probably responsible for the translocation of the substrate across the membrane [H]
COG id: COG4215
COG function: function code E; ABC-type arginine transport system, permease component
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 ABC transmembrane type-1 domain [H]
Homologues:
Organism=Escherichia coli, GI1788646, Length=225, Percent_Identity=58.6666666666667, Blast_Score=268, Evalue=2e-73, Organism=Escherichia coli, GI1787087, Length=217, Percent_Identity=35.4838709677419, Blast_Score=133, Evalue=1e-32, Organism=Escherichia coli, GI1787030, Length=212, Percent_Identity=34.9056603773585, Blast_Score=122, Evalue=2e-29, Organism=Escherichia coli, GI1788645, Length=210, Percent_Identity=35.2380952380952, Blast_Score=107, Evalue=8e-25, Organism=Escherichia coli, GI1788226, Length=219, Percent_Identity=30.1369863013699, Blast_Score=101, Evalue=4e-23, Organism=Escherichia coli, GI1786873, Length=219, Percent_Identity=25.5707762557078, Blast_Score=83, Evalue=2e-17, Organism=Escherichia coli, GI1786874, Length=220, Percent_Identity=29.5454545454545, Blast_Score=78, Evalue=6e-16, Organism=Escherichia coli, GI1787086, Length=219, Percent_Identity=27.8538812785388, Blast_Score=75, Evalue=4e-15, Organism=Escherichia coli, GI87082239, Length=215, Percent_Identity=28.3720930232558, Blast_Score=75, Evalue=5e-15,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR010065 - InterPro: IPR000515 [H]
Pfam domain/function: PF00528 BPD_transp_1 [H]
EC number: NA
Molecular weight: Translated: 26910; Mature: 26910
Theoretical pI: Translated: 10.10; Mature: 10.10
Prosite motif: PS50928 ABC_TM1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFETLLQNLGLSAFSLKGFGPLLLEGTWMTIKLSALSLLVAVLLGLLGASAKLSKIKLLR CHHHHHHHCCCCEEECCCCCCCEEECCCCEEHHHHHHHHHHHHHHHHCCCCHHHHHHHHH LPAQLYTTLIRGVPDLVLMLLIFYSLQTWLTTLTDYLEWEYIEIDPFSAGVLTLGFIYGA CCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCEEEEEECCCCHHHHHHHHHHHH YFTETFRGAILAVPRGQVEAATAYGLKRGQRFRFVVFPQMMRFALPGIGNNWMVMLKATA HHHHHHCCEEEECCCCCHHHHHHHHHHCCCEEEEEECHHHHHHHCCCCCCCHHHHHHHHH LVSIIGLADLVKAAQDAGKSTYQLFYFLVLAALIYLLITSASNFILRWLERRYAAGAREA HHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCHHHH VR CC >Mature Secondary Structure MFETLLQNLGLSAFSLKGFGPLLLEGTWMTIKLSALSLLVAVLLGLLGASAKLSKIKLLR CHHHHHHHCCCCEEECCCCCCCEEECCCCEEHHHHHHHHHHHHHHHHCCCCHHHHHHHHH LPAQLYTTLIRGVPDLVLMLLIFYSLQTWLTTLTDYLEWEYIEIDPFSAGVLTLGFIYGA CCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCEEEEEECCCCHHHHHHHHHHHH YFTETFRGAILAVPRGQVEAATAYGLKRGQRFRFVVFPQMMRFALPGIGNNWMVMLKATA HHHHHHCCEEEECCCCCHHHHHHHHHHCCCEEEEEECHHHHHHHCCCCCCCHHHHHHHHH LVSIIGLADLVKAAQDAGKSTYQLFYFLVLAALIYLLITSASNFILRWLERRYAAGAREA HHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCHHHH VR CC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; L-histidine [Periplasm]; H2O; ATP; L-ornithine [Periplasm]; L-arginine [Periplasm]; L-lysine [Periplasm] [C]
Specific reaction: ATP + L-histidine [Periplasm] + H2O = ADP + phosphate + L-histidine [Cytoplasm] ATP + L-ornithine [Periplasm] + H2O = ADP + phosphate + L-ornithine [Cytoplasm] ATP + L-arginine [Periplasm] + H2O = ADP + phosphate + L-arginine [Cytoplasm] ATP + L-lysine [P
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 9205837; 9278503 [H]