| Definition | Pseudomonas fluorescens Pf0-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007492 |
| Length | 6,438,405 |
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The map label for this gene is pepA [H]
Identifier: 77457216
GI number: 77457216
Start: 1149299
End: 1150789
Strand: Reverse
Name: pepA [H]
Synonym: Pfl01_0989
Alternate gene names: 77457216
Gene position: 1150789-1149299 (Counterclockwise)
Preceding gene: 77457225
Following gene: 77457215
Centisome position: 17.87
GC content: 63.31
Gene sequence:
>1491_bases ATGGAACTGGTTGTAAAAAGCGTTAGCCCAGAAACGTTGAAAACCGCCACCCTGGTGGTTGCCGTCGGCGAAGGCCGCAA ACTCGGTGCCGCCGCCAGGCAGGTCGACGAACTGAGCGGCGGCGCCATCAGCGCCGTGCTCAAGCGTGGCGACCTGGCCG GCAAGGTCGGCCAGAGCCTGTTGCTGCACAGCCTGCCGAACCTGAAAGCCGAACGCGTGCTGCTGGTGGGCGTGGGCAAG GATGAAGAACTGGGCGACCGTCCGTTCCGCAAGATCGTCGCCGGCATCCTCAACACCCTCAAAGGCCTGGGCGGCAGCGA CGCCGTACTGGCACTCGATGAAATCATCGTCAAGAACCGTGACAGTTACGGCAAGACCCGTCTGCTGGCCGAAACCCTGG TCGACGGCGAATACACCTTCGACCAGTTCAAGAGCCAGAAAGCCGAACCGCGCGCCCTGAAGAAAATCACCCTGCTGACC ATCAAGGCCGCTCAGGCCGAAGTGCAACGCGCCGTGAACCACGCCACCGCGATCGCCAACGGCATGGCATTCACCCGTAA CCTGGGCAACCTGCCGCCGAACATCTGCCACCCGACTTTCCTCGGCGAGCAAGCCAAGAACCTCGGCAAAGAGTTCAAGG ATCTGAAAGTCGAAGTCCTCGACGAGAAGAAGATCAAGTCGCTGGGCATGGGTTCGTTCTACGCCGTCGGCCAGGGCAGC GCCCAGCCGCCGCGCCTGATCGTCATGCAATACAACGGCGGCAAGAAATCCGAGAAGCCGTACGCACTGGTCGGTAAAGG CATCACCTTCGACACCGGCGGCATCAGCCTGAAACCGGGCGCCGGCATGGACGAGATGAAATACGACATGGGTGGCGCGG CCAGCGTGTTCGGCACCCTGCGCGCCGTGCTGGAACTGAAACTGCCGATCAACCTGGTGTGCATTCTGGCCTGCGCCGAG AACATGCCGAGCGGCACTGCTTCGCGTCCGGGCGACATCGTCACCACCATGAGCGGCCAGACCGTGGAAATCCTCAACAC CGACGCCGAAGGCCGTCTGGTGCTGTGCGATGCCCTGACCTACTCCGAGCGCTTCAAGCCGCAAGCGGTGATCGACATCG CCACCCTGACCGGTGCCTGCGTCGTTGCCCTGGGCGCCCACACTTCGGGCCTGCTGGGCAACAACGACGAACTGATCGAG CAATTGCTGAGCGCCGGCAAGGCTGCCGACGACCGCGCCTGGCAACTGCCGCTGTTCGATGAGTACCAGGAGCAACTGGA CAGCCCGTTCGCCGACATCGCCAACATCGGCGGTCCGAAGGCCGGCACCATCACCGCCGCCTGCTTCCTGTCGCGCTTCA CCAAGAACCTGAACTGGGCGCACCTGGATATCGCAGGCACCGCCTGGACCAGCGGCGGCAAGGACAAGGGCGCAACCGGC CGTCCGGTTCCGCTGTTGACCCAATACTTGCTGGACCGCGCCAAAGCCTGA
Upstream 100 bases:
>100_bases CTCTGTCGCAGGCACTGGCCTGCGCCTCTTCTCTCTATAAGCAGGCGACGGCGGACACGTCGAACGCCTGTGTGTTGACC ATTCATTCAGGGATCCGGAC
Downstream 100 bases:
>100_bases AACCGATGACTGCGAGCGGCGCCTCTCTTGAGGGGCGCCGCTCGCAGCTCAGGAACCGCAATGACCAAAGTCGACTTTTA TATCCTGCCCAGCGCCGATC
Product: leucyl aminopeptidase
Products: NA
Alternate protein names: Leucine aminopeptidase; LAP; Leucyl aminopeptidase [H]
Number of amino acids: Translated: 496; Mature: 496
Protein sequence:
>496_residues MELVVKSVSPETLKTATLVVAVGEGRKLGAAARQVDELSGGAISAVLKRGDLAGKVGQSLLLHSLPNLKAERVLLVGVGK DEELGDRPFRKIVAGILNTLKGLGGSDAVLALDEIIVKNRDSYGKTRLLAETLVDGEYTFDQFKSQKAEPRALKKITLLT IKAAQAEVQRAVNHATAIANGMAFTRNLGNLPPNICHPTFLGEQAKNLGKEFKDLKVEVLDEKKIKSLGMGSFYAVGQGS AQPPRLIVMQYNGGKKSEKPYALVGKGITFDTGGISLKPGAGMDEMKYDMGGAASVFGTLRAVLELKLPINLVCILACAE NMPSGTASRPGDIVTTMSGQTVEILNTDAEGRLVLCDALTYSERFKPQAVIDIATLTGACVVALGAHTSGLLGNNDELIE QLLSAGKAADDRAWQLPLFDEYQEQLDSPFADIANIGGPKAGTITAACFLSRFTKNLNWAHLDIAGTAWTSGGKDKGATG RPVPLLTQYLLDRAKA
Sequences:
>Translated_496_residues MELVVKSVSPETLKTATLVVAVGEGRKLGAAARQVDELSGGAISAVLKRGDLAGKVGQSLLLHSLPNLKAERVLLVGVGK DEELGDRPFRKIVAGILNTLKGLGGSDAVLALDEIIVKNRDSYGKTRLLAETLVDGEYTFDQFKSQKAEPRALKKITLLT IKAAQAEVQRAVNHATAIANGMAFTRNLGNLPPNICHPTFLGEQAKNLGKEFKDLKVEVLDEKKIKSLGMGSFYAVGQGS AQPPRLIVMQYNGGKKSEKPYALVGKGITFDTGGISLKPGAGMDEMKYDMGGAASVFGTLRAVLELKLPINLVCILACAE NMPSGTASRPGDIVTTMSGQTVEILNTDAEGRLVLCDALTYSERFKPQAVIDIATLTGACVVALGAHTSGLLGNNDELIE QLLSAGKAADDRAWQLPLFDEYQEQLDSPFADIANIGGPKAGTITAACFLSRFTKNLNWAHLDIAGTAWTSGGKDKGATG RPVPLLTQYLLDRAKA >Mature_496_residues MELVVKSVSPETLKTATLVVAVGEGRKLGAAARQVDELSGGAISAVLKRGDLAGKVGQSLLLHSLPNLKAERVLLVGVGK DEELGDRPFRKIVAGILNTLKGLGGSDAVLALDEIIVKNRDSYGKTRLLAETLVDGEYTFDQFKSQKAEPRALKKITLLT IKAAQAEVQRAVNHATAIANGMAFTRNLGNLPPNICHPTFLGEQAKNLGKEFKDLKVEVLDEKKIKSLGMGSFYAVGQGS AQPPRLIVMQYNGGKKSEKPYALVGKGITFDTGGISLKPGAGMDEMKYDMGGAASVFGTLRAVLELKLPINLVCILACAE NMPSGTASRPGDIVTTMSGQTVEILNTDAEGRLVLCDALTYSERFKPQAVIDIATLTGACVVALGAHTSGLLGNNDELIE QLLSAGKAADDRAWQLPLFDEYQEQLDSPFADIANIGGPKAGTITAACFLSRFTKNLNWAHLDIAGTAWTSGGKDKGATG RPVPLLTQYLLDRAKA
Specific function: Presumably involved in the processing and regular turnover of intracellular proteins. Catalyzes the removal of unsubstituted N-terminal amino acids from various peptides [H]
COG id: COG0260
COG function: function code E; Leucyl aminopeptidase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the peptidase M17 family [H]
Homologues:
Organism=Homo sapiens, GI41393561, Length=484, Percent_Identity=36.1570247933884, Blast_Score=261, Evalue=8e-70, Organism=Homo sapiens, GI47155554, Length=274, Percent_Identity=36.8613138686131, Blast_Score=145, Evalue=1e-34, Organism=Escherichia coli, GI1790710, Length=498, Percent_Identity=55.0200803212851, Blast_Score=549, Evalue=1e-157, Organism=Escherichia coli, GI87082123, Length=292, Percent_Identity=40.4109589041096, Blast_Score=191, Evalue=8e-50, Organism=Caenorhabditis elegans, GI17556903, Length=295, Percent_Identity=35.5932203389831, Blast_Score=149, Evalue=4e-36, Organism=Caenorhabditis elegans, GI17565172, Length=309, Percent_Identity=26.8608414239482, Blast_Score=85, Evalue=1e-16, Organism=Drosophila melanogaster, GI20129969, Length=489, Percent_Identity=29.4478527607362, Blast_Score=203, Evalue=3e-52, Organism=Drosophila melanogaster, GI24662227, Length=484, Percent_Identity=29.7520661157025, Blast_Score=199, Evalue=3e-51, Organism=Drosophila melanogaster, GI24661038, Length=469, Percent_Identity=30.4904051172708, Blast_Score=190, Evalue=2e-48, Organism=Drosophila melanogaster, GI21355725, Length=469, Percent_Identity=30.2771855010661, Blast_Score=190, Evalue=2e-48, Organism=Drosophila melanogaster, GI161077148, Length=483, Percent_Identity=28.7784679089027, Blast_Score=185, Evalue=7e-47, Organism=Drosophila melanogaster, GI20130057, Length=483, Percent_Identity=28.7784679089027, Blast_Score=185, Evalue=7e-47, Organism=Drosophila melanogaster, GI21355645, Length=492, Percent_Identity=27.8455284552846, Blast_Score=184, Evalue=8e-47, Organism=Drosophila melanogaster, GI24662223, Length=492, Percent_Identity=27.8455284552846, Blast_Score=184, Evalue=8e-47, Organism=Drosophila melanogaster, GI19922386, Length=481, Percent_Identity=29.9376299376299, Blast_Score=179, Evalue=4e-45, Organism=Drosophila melanogaster, GI20129963, Length=489, Percent_Identity=28.6298568507157, Blast_Score=165, Evalue=7e-41, Organism=Drosophila melanogaster, GI221379063, Length=310, Percent_Identity=35.1612903225806, Blast_Score=151, Evalue=9e-37, Organism=Drosophila melanogaster, GI221379062, Length=310, Percent_Identity=35.1612903225806, Blast_Score=151, Evalue=9e-37, Organism=Drosophila melanogaster, GI21357381, Length=310, Percent_Identity=35.1612903225806, Blast_Score=151, Evalue=1e-36, Organism=Drosophila melanogaster, GI24646701, Length=269, Percent_Identity=27.8810408921933, Blast_Score=88, Evalue=1e-17, Organism=Drosophila melanogaster, GI24646703, Length=269, Percent_Identity=27.8810408921933, Blast_Score=88, Evalue=1e-17, Organism=Drosophila melanogaster, GI21358201, Length=269, Percent_Identity=27.8810408921933, Blast_Score=88, Evalue=1e-17,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011356 - InterPro: IPR000819 - InterPro: IPR023042 - InterPro: IPR008283 [H]
Pfam domain/function: PF00883 Peptidase_M17; PF02789 Peptidase_M17_N [H]
EC number: =3.4.11.1; =3.4.11.10 [H]
Molecular weight: Translated: 52570; Mature: 52570
Theoretical pI: Translated: 8.34; Mature: 8.34
Prosite motif: PS00631 CYTOSOL_AP
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MELVVKSVSPETLKTATLVVAVGEGRKLGAAARQVDELSGGAISAVLKRGDLAGKVGQSL CCEEEECCCCCCEEEEEEEEEECCCCCHHHHHHHHHHHCCHHHHHHHHHCCHHHHHHHHH LLHSLPNLKAERVLLVGVGKDEELGDRPFRKIVAGILNTLKGLGGSDAVLALDEIIVKNR HHHHCCCCCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCC DSYGKTRLLAETLVDGEYTFDQFKSQKAEPRALKKITLLTIKAAQAEVQRAVNHATAIAN CCCCHHHHHHHHHCCCCCCHHHHHCCCCCCHHHHEEEEEEEHHHHHHHHHHHHHHHHHHH GMAFTRNLGNLPPNICHPTFLGEQAKNLGKEFKDLKVEVLDEKKIKSLGMGSFYAVGQGS CHHHHHHCCCCCCCCCCCHHCCHHHHHHHHHHHHCEEEECCHHHHHHCCCCCEEEECCCC AQPPRLIVMQYNGGKKSEKPYALVGKGITFDTGGISLKPGAGMDEMKYDMGGAASVFGTL CCCCEEEEEEECCCCCCCCCEEEEECCEEECCCCEEECCCCCHHHHHHCCCCHHHHHHHH RAVLELKLPINLVCILACAENMPSGTASRPGDIVTTMSGQTVEILNTDAEGRLVLCDALT HHHHHHCCCHHHHHHHHHHCCCCCCCCCCCCCEEEECCCCEEEEEECCCCCCEEEEECCC YSERFKPQAVIDIATLTGACVVALGAHTSGLLGNNDELIEQLLSAGKAADDRAWQLPLFD HHHHCCCCCEEEHHHHHHHHHEEECCCCCCCCCCCHHHHHHHHHCCCCCCCCEEECCCHH EYQEQLDSPFADIANIGGPKAGTITAACFLSRFTKNLNWAHLDIAGTAWTSGGKDKGATG HHHHHHCCCHHHHHHCCCCCCCHHHHHHHHHHHHCCCCEEEEEEECEEECCCCCCCCCCC RPVPLLTQYLLDRAKA CCHHHHHHHHHHHCCC >Mature Secondary Structure MELVVKSVSPETLKTATLVVAVGEGRKLGAAARQVDELSGGAISAVLKRGDLAGKVGQSL CCEEEECCCCCCEEEEEEEEEECCCCCHHHHHHHHHHHCCHHHHHHHHHCCHHHHHHHHH LLHSLPNLKAERVLLVGVGKDEELGDRPFRKIVAGILNTLKGLGGSDAVLALDEIIVKNR HHHHCCCCCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCC DSYGKTRLLAETLVDGEYTFDQFKSQKAEPRALKKITLLTIKAAQAEVQRAVNHATAIAN CCCCHHHHHHHHHCCCCCCHHHHHCCCCCCHHHHEEEEEEEHHHHHHHHHHHHHHHHHHH GMAFTRNLGNLPPNICHPTFLGEQAKNLGKEFKDLKVEVLDEKKIKSLGMGSFYAVGQGS CHHHHHHCCCCCCCCCCCHHCCHHHHHHHHHHHHCEEEECCHHHHHHCCCCCEEEECCCC AQPPRLIVMQYNGGKKSEKPYALVGKGITFDTGGISLKPGAGMDEMKYDMGGAASVFGTL CCCCEEEEEEECCCCCCCCCEEEEECCEEECCCCEEECCCCCHHHHHHCCCCHHHHHHHH RAVLELKLPINLVCILACAENMPSGTASRPGDIVTTMSGQTVEILNTDAEGRLVLCDALT HHHHHHCCCHHHHHHHHHHCCCCCCCCCCCCCEEEECCCCEEEEEECCCCCCEEEEECCC YSERFKPQAVIDIATLTGACVVALGAHTSGLLGNNDELIEQLLSAGKAADDRAWQLPLFD HHHHCCCCCEEEHHHHHHHHHEEECCCCCCCCCCCHHHHHHHHHCCCCCCCCEEECCCHH EYQEQLDSPFADIANIGGPKAGTITAACFLSRFTKNLNWAHLDIAGTAWTSGGKDKGATG HHHHHHCCCHHHHHHCCCCCCCHHHHHHHHHHHHCCCCEEEEEEECEEECCCCCCCCCCC RPVPLLTQYLLDRAKA CCHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA