| Definition | Pseudomonas fluorescens Pf0-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007492 |
| Length | 6,438,405 |
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The map label for this gene is fadI [H]
Identifier: 77456884
GI number: 77456884
Start: 768993
End: 770270
Strand: Direct
Name: fadI [H]
Synonym: Pfl01_0656
Alternate gene names: 77456884
Gene position: 768993-770270 (Clockwise)
Preceding gene: 77456879
Following gene: 77456886
Centisome position: 11.94
GC content: 64.16
Gene sequence:
>1278_bases ATGAGTCAGCTGCGCCGCGTCGCGATCATTGGTGGCAACCGTATTCCGTTCGCCCGCTCCAACGGGCCGTATGCCACCGC GAGCAATCAGGTGATGCTCACCGCCGCCCTCGAAGGCCTGATCGAACGCTACAACCTGCACGGCCAGCGCATCGGCGAAG TGGTCGCAGGGGCGGTGCTGAAATTGTCACGGGATATGAACCTGACCCGCGAGTGCGTGCTTGGCTCACGCCTGTCACCG GCCACCCCGGCCTACGACATTCAGCAGGCCTGCGGAACCGGCCTGGAAGCGGCGTTGCTGGTGGCGAACAAGATTGCCCT CGGCCAGATTGATTGCGGTATTGCCGGCGGCGTCGACACCACGTCGGACGCGCCGATCAGCGTCAGCGAAGGCCTGCGCA AGATCCTGCTGCAAGCCAACCGCGCCAAGACCACCGGCGACAAGCTCAAGACCTTTCTGCAATTGCGCCCGAAACACCTG ATCCCCGAATTCCCGCGCAACGGCGAACCGCGCACCGGCCTGTCGATGGGCGAGCACTGCGAGTCGATGGCGCAGACCTG GAACATTCCCCGCGAAGAACAGGATCAACTGGCCTTCGAAAGCCACCACAAACTGGCGGCGTCCTACAGCGAAGGCTGGC ACAACGACCTGATGACCCCGTTCCTCGGCCTGACCCGCGACAACAACCTGCGCCCGGACCTGACCCTGGAAAAACTCGCG ACCCTGAAGCCGGCCTTCGAGAAAAGCGCCAAGGGCACGCTGACCGCCGGCAACTCCACGCCGCTGACCGATGGCGCCTC GGTGGTGTTGCTGGGTAGTGAAGAGTGGGCGAAGGAGCGTGGTCTGCCAATCCTTGCGTATCTGCGCGACGGCGAAGCAG CGGCGGTGGATTTCGTCAACGGCGCCGAAGGGCTGCTGATGGCTCCGGTCTATGCGGTGCCACGCTTGCTGGCCCGCAAT GGAATGACCTTGCAGGACTTCGACTACTACGAAATCCACGAGGCCTTTGCTGCGCAGGTGTTGTGCACGTTGAAGGCCTG GGAAGATCCGGAATACTGCAAGACCCGGCTCGGGCTGGACGCGCCGTTGGGGGGGATTGATCGTAGCCGCTTGAACGTCA AGGGCAGCTCACTGGCGGCGGGGCATCCGTTTGCCGCGACGGGCGGGCGGATCGTGGCGAACCTGGCGAAGTTGCTGGAT GCGGCGGGGCAGGGGCGGGGGTTGATTTCGATTTGTGCGGCTGGCGGACAGGGTGTGACGGCGATCATCGAGCGCTAG
Upstream 100 bases:
>100_bases TACGCTAGAACAGCAGAGTAGTTTGCCCTCGGCGCTTTTGTGGCCCGACCGGGTTTTCAGCGCTCGATTTTCAGACCGGA TATTTCACAAGGAGCATTTC
Downstream 100 bases:
>100_bases AAGAGCAAAAGCTTGCCCTCACCCTAACCCTCTCCCGGAGGGAGAGGGGACTGATTGGGGGATATTGGAGAGGTTCACCG ACGTGAGAGATTGGTTATGA
Product: acetyl-CoA acetyltransferase
Products: NA
Alternate protein names: ACSs; Acetyl-CoA acyltransferase; Acyl-CoA ligase; Beta-ketothiolase; Fatty acid oxidation complex subunit beta [H]
Number of amino acids: Translated: 425; Mature: 424
Protein sequence:
>425_residues MSQLRRVAIIGGNRIPFARSNGPYATASNQVMLTAALEGLIERYNLHGQRIGEVVAGAVLKLSRDMNLTRECVLGSRLSP ATPAYDIQQACGTGLEAALLVANKIALGQIDCGIAGGVDTTSDAPISVSEGLRKILLQANRAKTTGDKLKTFLQLRPKHL IPEFPRNGEPRTGLSMGEHCESMAQTWNIPREEQDQLAFESHHKLAASYSEGWHNDLMTPFLGLTRDNNLRPDLTLEKLA TLKPAFEKSAKGTLTAGNSTPLTDGASVVLLGSEEWAKERGLPILAYLRDGEAAAVDFVNGAEGLLMAPVYAVPRLLARN GMTLQDFDYYEIHEAFAAQVLCTLKAWEDPEYCKTRLGLDAPLGGIDRSRLNVKGSSLAAGHPFAATGGRIVANLAKLLD AAGQGRGLISICAAGGQGVTAIIER
Sequences:
>Translated_425_residues MSQLRRVAIIGGNRIPFARSNGPYATASNQVMLTAALEGLIERYNLHGQRIGEVVAGAVLKLSRDMNLTRECVLGSRLSP ATPAYDIQQACGTGLEAALLVANKIALGQIDCGIAGGVDTTSDAPISVSEGLRKILLQANRAKTTGDKLKTFLQLRPKHL IPEFPRNGEPRTGLSMGEHCESMAQTWNIPREEQDQLAFESHHKLAASYSEGWHNDLMTPFLGLTRDNNLRPDLTLEKLA TLKPAFEKSAKGTLTAGNSTPLTDGASVVLLGSEEWAKERGLPILAYLRDGEAAAVDFVNGAEGLLMAPVYAVPRLLARN GMTLQDFDYYEIHEAFAAQVLCTLKAWEDPEYCKTRLGLDAPLGGIDRSRLNVKGSSLAAGHPFAATGGRIVANLAKLLD AAGQGRGLISICAAGGQGVTAIIER >Mature_424_residues SQLRRVAIIGGNRIPFARSNGPYATASNQVMLTAALEGLIERYNLHGQRIGEVVAGAVLKLSRDMNLTRECVLGSRLSPA TPAYDIQQACGTGLEAALLVANKIALGQIDCGIAGGVDTTSDAPISVSEGLRKILLQANRAKTTGDKLKTFLQLRPKHLI PEFPRNGEPRTGLSMGEHCESMAQTWNIPREEQDQLAFESHHKLAASYSEGWHNDLMTPFLGLTRDNNLRPDLTLEKLAT LKPAFEKSAKGTLTAGNSTPLTDGASVVLLGSEEWAKERGLPILAYLRDGEAAAVDFVNGAEGLLMAPVYAVPRLLARNG MTLQDFDYYEIHEAFAAQVLCTLKAWEDPEYCKTRLGLDAPLGGIDRSRLNVKGSSLAAGHPFAATGGRIVANLAKLLDA AGQGRGLISICAAGGQGVTAIIER
Specific function: Catalyzes the final step of fatty acid oxidation in which acetyl-CoA is released and the CoA ester of a fatty acid two carbons shorter is formed [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the thiolase family [H]
Homologues:
Organism=Homo sapiens, GI4504327, Length=427, Percent_Identity=37.0023419203747, Blast_Score=263, Evalue=3e-70, Organism=Homo sapiens, GI4501853, Length=433, Percent_Identity=29.0993071593533, Blast_Score=168, Evalue=9e-42, Organism=Homo sapiens, GI167614485, Length=435, Percent_Identity=28.9655172413793, Blast_Score=160, Evalue=3e-39, Organism=Homo sapiens, GI148539872, Length=429, Percent_Identity=25.8741258741259, Blast_Score=155, Evalue=7e-38, Organism=Homo sapiens, GI4557237, Length=438, Percent_Identity=27.1689497716895, Blast_Score=146, Evalue=4e-35, Organism=Escherichia coli, GI1788683, Length=411, Percent_Identity=38.6861313868613, Blast_Score=275, Evalue=4e-75, Organism=Escherichia coli, GI87082165, Length=433, Percent_Identity=30.715935334873, Blast_Score=171, Evalue=9e-44, Organism=Escherichia coli, GI1788554, Length=433, Percent_Identity=30.0230946882217, Blast_Score=159, Evalue=3e-40, Organism=Escherichia coli, GI1787663, Length=436, Percent_Identity=29.8165137614679, Blast_Score=146, Evalue=3e-36, Organism=Escherichia coli, GI48994986, Length=435, Percent_Identity=28.0459770114943, Blast_Score=134, Evalue=1e-32, Organism=Caenorhabditis elegans, GI17551802, Length=424, Percent_Identity=35.6132075471698, Blast_Score=246, Evalue=1e-65, Organism=Caenorhabditis elegans, GI17535921, Length=434, Percent_Identity=28.110599078341, Blast_Score=144, Evalue=7e-35, Organism=Caenorhabditis elegans, GI133906874, Length=427, Percent_Identity=26.9320843091335, Blast_Score=137, Evalue=1e-32, Organism=Caenorhabditis elegans, GI25147385, Length=433, Percent_Identity=24.2494226327945, Blast_Score=126, Evalue=2e-29, Organism=Saccharomyces cerevisiae, GI6322031, Length=434, Percent_Identity=29.9539170506912, Blast_Score=167, Evalue=3e-42, Organism=Saccharomyces cerevisiae, GI6325229, Length=443, Percent_Identity=30.0225733634311, Blast_Score=157, Evalue=2e-39, Organism=Drosophila melanogaster, GI17137578, Length=427, Percent_Identity=38.6416861826698, Blast_Score=276, Evalue=1e-74, Organism=Drosophila melanogaster, GI24655093, Length=432, Percent_Identity=26.1574074074074, Blast_Score=157, Evalue=1e-38, Organism=Drosophila melanogaster, GI24640423, Length=437, Percent_Identity=25.1716247139588, Blast_Score=138, Evalue=8e-33, Organism=Drosophila melanogaster, GI17648125, Length=431, Percent_Identity=27.6102088167053, Blast_Score=132, Evalue=3e-31,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR012806 - InterPro: IPR002155 - InterPro: IPR016039 - InterPro: IPR016038 - InterPro: IPR020610 - InterPro: IPR020617 - InterPro: IPR020613 - InterPro: IPR020616 [H]
Pfam domain/function: PF02803 Thiolase_C; PF00108 Thiolase_N [H]
EC number: =2.3.1.16 [H]
Molecular weight: Translated: 45464; Mature: 45332
Theoretical pI: Translated: 7.19; Mature: 7.19
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSQLRRVAIIGGNRIPFARSNGPYATASNQVMLTAALEGLIERYNLHGQRIGEVVAGAVL CCCCCEEEEECCCCCCCCCCCCCCCCCCCCEEHHHHHHHHHHHHCCCHHHHHHHHHHHHH KLSRDMNLTRECVLGSRLSPATPAYDIQQACGTGLEAALLVANKIALGQIDCGIAGGVDT HHHCCCCHHHHHHHCCCCCCCCCCHHHHHHHCCCHHHHHHHHHHHEECCCCCCCCCCCCC TSDAPISVSEGLRKILLQANRAKTTGDKLKTFLQLRPKHLIPEFPRNGEPRTGLSMGEHC CCCCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCHHCCCCCCCCCCCCCCCCHHHHH ESMAQTWNIPREEQDQLAFESHHKLAASYSEGWHNDLMTPFLGLTRDNNLRPDLTLEKLA HHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCCCCCCCHHHHHH TLKPAFEKSAKGTLTAGNSTPLTDGASVVLLGSEEWAKERGLPILAYLRDGEAAAVDFVN HHCHHHHHCCCCEEECCCCCCCCCCCEEEEECCHHHHHHCCCEEEEEEECCCEEEEEECC GAEGLLMAPVYAVPRLLARNGMTLQDFDYYEIHEAFAAQVLCTLKAWEDPEYCKTRLGLD CCCCCEECHHHHHHHHHHHCCCEEECCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCC APLGGIDRSRLNVKGSSLAAGHPFAATGGRIVANLAKLLDAAGQGRGLISICAAGGQGVT CCCCCCCCCEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCEEEEEECCCCCCE AIIER EEECC >Mature Secondary Structure SQLRRVAIIGGNRIPFARSNGPYATASNQVMLTAALEGLIERYNLHGQRIGEVVAGAVL CCCCEEEEECCCCCCCCCCCCCCCCCCCCEEHHHHHHHHHHHHCCCHHHHHHHHHHHHH KLSRDMNLTRECVLGSRLSPATPAYDIQQACGTGLEAALLVANKIALGQIDCGIAGGVDT HHHCCCCHHHHHHHCCCCCCCCCCHHHHHHHCCCHHHHHHHHHHHEECCCCCCCCCCCCC TSDAPISVSEGLRKILLQANRAKTTGDKLKTFLQLRPKHLIPEFPRNGEPRTGLSMGEHC CCCCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCHHCCCCCCCCCCCCCCCCHHHHH ESMAQTWNIPREEQDQLAFESHHKLAASYSEGWHNDLMTPFLGLTRDNNLRPDLTLEKLA HHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCCCCCCCHHHHHH TLKPAFEKSAKGTLTAGNSTPLTDGASVVLLGSEEWAKERGLPILAYLRDGEAAAVDFVN HHCHHHHHCCCCEEECCCCCCCCCCCEEEEECCHHHHHHCCCEEEEEEECCCEEEEEECC GAEGLLMAPVYAVPRLLARNGMTLQDFDYYEIHEAFAAQVLCTLKAWEDPEYCKTRLGLD CCCCCEECHHHHHHHHHHHCCCEEECCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCC APLGGIDRSRLNVKGSSLAAGHPFAATGGRIVANLAKLLDAAGQGRGLISICAAGGQGVT CCCCCCCCCEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCEEEEEECCCCCCE AIIER EEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA