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The map label for this gene is atoC [H]

Identifier: 77456879

GI number: 77456879

Start: 761904

End: 762311

Strand: Direct

Name: atoC [H]

Synonym: Pfl01_0651

Alternate gene names: 77456879

Gene position: 761904-762311 (Clockwise)

Preceding gene: 77456878

Following gene: 77456884

Centisome position: 11.83

GC content: 56.13

Gene sequence:

>408_bases
ATGTCTTTCTCCCATACGCCCCGCCAACAGTTGCTTCTGGTCGATGACGAGGAGGACGCACTGCTGGAACTGGCGGAGTT
GCTGGAGGGGGAGGGCTTTGTCTGTCATACCGCGACCTCGGTGAAACTGGCCCTGCATCATTTGACCCGGCATCCCGATA
TCGCGCTGGTGATTACCGATCTGCGCATGCCGGAGGAAAGCGGCATGTCGCTGATAAAGCGATTGCGCGAACACACCTCG
CGCCAGCATTTACCGGTGATTGTGACTTCCGGGCATGCGGACATGGAGGATGTGAGCGACATGCTGCGGTTGCAGGTACT
GGATCTGTTTCGCAAGCCGATTTATCACGTTCGGTTGCTTGAGACGCTGGATAATCTGTTTCCCAAGCCTCGGGTGAATG
TTTCTTGA

Upstream 100 bases:

>100_bases
CAGGCCGCACTCTGATCGGGTAGGCAGCCATGGCCGGCAACTTGCGAATGCGCCCAAGGGGTTCTAACGTCAGCGCTTAG
TCCATCGCAGGAATCGCCCT

Downstream 100 bases:

>100_bases
GGGTTTGACTTGGCGGCCTTTGGGCCGACCATGTTGTTGGGGTTTTGGGTGAATATCCGTTTCTGCGGGTGCGCCTGCTG
GCGGTTTCGCCCTTACGGCG

Product: response regulator receiver domain-containing protein

Products: NA

Alternate protein names: Ornithine decarboxylase antizyme; Ornithine/arginine decarboxylase inhibitor [H]

Number of amino acids: Translated: 135; Mature: 134

Protein sequence:

>135_residues
MSFSHTPRQQLLLVDDEEDALLELAELLEGEGFVCHTATSVKLALHHLTRHPDIALVITDLRMPEESGMSLIKRLREHTS
RQHLPVIVTSGHADMEDVSDMLRLQVLDLFRKPIYHVRLLETLDNLFPKPRVNVS

Sequences:

>Translated_135_residues
MSFSHTPRQQLLLVDDEEDALLELAELLEGEGFVCHTATSVKLALHHLTRHPDIALVITDLRMPEESGMSLIKRLREHTS
RQHLPVIVTSGHADMEDVSDMLRLQVLDLFRKPIYHVRLLETLDNLFPKPRVNVS
>Mature_134_residues
SFSHTPRQQLLLVDDEEDALLELAELLEGEGFVCHTATSVKLALHHLTRHPDIALVITDLRMPEESGMSLIKRLREHTSR
QHLPVIVTSGHADMEDVSDMLRLQVLDLFRKPIYHVRLLETLDNLFPKPRVNVS

Specific function: Member of the two-component regulatory system AtoS/AtoC involved in the transcriptional regulation of the ato genes for acetoacetate metabolism. Also an inhibitor of polyamine biosynthesis [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm (Probable) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 sigma-54 factor interaction domain [H]

Homologues:

Organism=Escherichia coli, GI1788550, Length=110, Percent_Identity=34.5454545454545, Blast_Score=65, Evalue=2e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003593
- InterPro:   IPR011006
- InterPro:   IPR020441
- InterPro:   IPR009057
- InterPro:   IPR002197
- InterPro:   IPR002078
- InterPro:   IPR001789 [H]

Pfam domain/function: PF02954 HTH_8; PF00072 Response_reg; PF00158 Sigma54_activat [H]

EC number: NA

Molecular weight: Translated: 15449; Mature: 15318

Theoretical pI: Translated: 6.01; Mature: 6.01

Prosite motif: PS50110 RESPONSE_REGULATORY

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
3.7 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSFSHTPRQQLLLVDDEEDALLELAELLEGEGFVCHTATSVKLALHHLTRHPDIALVITD
CCCCCCCCCEEEEEECCHHHHHHHHHHHCCCCEEEECHHHHHHHHHHHHCCCCEEEEEEC
LRMPEESGMSLIKRLREHTSRQHLPVIVTSGHADMEDVSDMLRLQVLDLFRKPIYHVRLL
CCCCCCCCHHHHHHHHHHHCCCCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
ETLDNLFPKPRVNVS
HHHHHHCCCCCCCCC
>Mature Secondary Structure 
SFSHTPRQQLLLVDDEEDALLELAELLEGEGFVCHTATSVKLALHHLTRHPDIALVITD
CCCCCCCCEEEEEECCHHHHHHHHHHHCCCCEEEECHHHHHHHHHHHHCCCCEEEEEEC
LRMPEESGMSLIKRLREHTSRQHLPVIVTSGHADMEDVSDMLRLQVLDLFRKPIYHVRLL
CCCCCCCCHHHHHHHHHHHCCCCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
ETLDNLFPKPRVNVS
HHHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9097040; 9278503; 8346225 [H]