| Definition | Pseudomonas fluorescens Pf0-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007492 |
| Length | 6,438,405 |
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The map label for this gene is 77456786
Identifier: 77456786
GI number: 77456786
Start: 652542
End: 653447
Strand: Direct
Name: 77456786
Synonym: Pfl01_0558
Alternate gene names: NA
Gene position: 652542-653447 (Clockwise)
Preceding gene: 77456785
Following gene: 77456794
Centisome position: 10.14
GC content: 57.84
Gene sequence:
>906_bases GTGAGTAACCGAGGTGAGCAGTCGCTGCTCAAACAATCGACCATCCTGATGTTCGCCGTGTCGATCGCCGGGATCGCCAC CGGTTTTGTTTCGGGTTCCCAGTCCATCCTGTTCGATGGTTTTTTTTCGTTGATTGCAACGTTCATCAAAGTCCTGATGC TGATCACCGCGAAGCTGATCGCCAAGCAAAGCAACCAGCGTTTCCAGTTCGGTTTCTGGCATCTGGAGCCGATGGTGCTG TTGATCGAGGGCAGTTTTCTGTTGCTGATCGCGATCTACGCGTTTCTCAACGGTGTGTTCGGCATCATCAACGGCGGTCG TGAAATCGAGCTGGGGCTGGTGATCATCTACGCGGCGGTGTTCACCGTTGTCGAGTTCGCCTACTTCTTCTACGTGCGCC ACCGTAATCGCAAGTTCAAGTCGAGCCTTATCCAGTTCGACAACATCAGCTGGCTTGTAGACGCGATGCTGTCGGTGGGC CTGTTGATCAGTTTTCTCGCGGCGCTGCTGCTCAAGTCCCAGGGCTATGGCGAGTGGGCGAAATTTGTCGACCCGCTGAT TCTCATCGTGCTGGCCCTGACCATGCTGCCGCCGGCCTTCAAGATCCTCGGCCCGGCGCTGCGGGACGTACTCGGTATTG CGCCGGACACGCTGGACGATCAGGTGCGCCAGGTGATGGATGCGGCCAAGGTCGAGCATGGTTTCGACGACTACGTGTCC TACGTGCAGAAGCACGGGCGGGCGCGGTTCATCGAAATTCATGTGGTGTTGCCGGCGAATTACCGGCTGCAGAGCGTCGG TCAGCTGGATGTGCTGCGTGAGGAGATTTCCGCGAAGCTGGGCAAACCGGATGCGGCGCGCTGGCTGACCATCAGCTTCA CCGGCGACAGGAAGTGGATTGCCTGA
Upstream 100 bases:
>100_bases GGCAAAGAGGGCAAATCGGCCAAAATCTGGCAGTAAGGTAGACTCACTCCTCAACAACCCGCCGCACCCAGCGGTTTTCA AGGTTTTTCGAGGAGTCAAA
Downstream 100 bases:
>100_bases TGTTGCGTGGCGAGGGAGTCGCCTCCCTCGCCACGGCTGTCAGCTCAGATAGTCGGCGAGGCCGCGGTAGCAGGTCGCCA AGTGATACGGCGTGGTCGAC
Product: cation efflux protein
Products: NA
Alternate protein names: Cation Efflux Protein; Co/Zn/Cd Cation Transporter; Cobalt-Zinc-Cadmium Resistance Protein; Cation Efflux System Component; Cation Transporter; Cation Efflux Transporter Protein; Cation Transporter-Like Membrane Protein; Cation Efflux Transmembrane Protein; CDF Family Transporter; Cation Efflux Pump; Cation Efflux System Protein; Cation Efflux Family Protein
Number of amino acids: Translated: 301; Mature: 300
Protein sequence:
>301_residues MSNRGEQSLLKQSTILMFAVSIAGIATGFVSGSQSILFDGFFSLIATFIKVLMLITAKLIAKQSNQRFQFGFWHLEPMVL LIEGSFLLLIAIYAFLNGVFGIINGGREIELGLVIIYAAVFTVVEFAYFFYVRHRNRKFKSSLIQFDNISWLVDAMLSVG LLISFLAALLLKSQGYGEWAKFVDPLILIVLALTMLPPAFKILGPALRDVLGIAPDTLDDQVRQVMDAAKVEHGFDDYVS YVQKHGRARFIEIHVVLPANYRLQSVGQLDVLREEISAKLGKPDAARWLTISFTGDRKWIA
Sequences:
>Translated_301_residues MSNRGEQSLLKQSTILMFAVSIAGIATGFVSGSQSILFDGFFSLIATFIKVLMLITAKLIAKQSNQRFQFGFWHLEPMVL LIEGSFLLLIAIYAFLNGVFGIINGGREIELGLVIIYAAVFTVVEFAYFFYVRHRNRKFKSSLIQFDNISWLVDAMLSVG LLISFLAALLLKSQGYGEWAKFVDPLILIVLALTMLPPAFKILGPALRDVLGIAPDTLDDQVRQVMDAAKVEHGFDDYVS YVQKHGRARFIEIHVVLPANYRLQSVGQLDVLREEISAKLGKPDAARWLTISFTGDRKWIA >Mature_300_residues SNRGEQSLLKQSTILMFAVSIAGIATGFVSGSQSILFDGFFSLIATFIKVLMLITAKLIAKQSNQRFQFGFWHLEPMVLL IEGSFLLLIAIYAFLNGVFGIINGGREIELGLVIIYAAVFTVVEFAYFFYVRHRNRKFKSSLIQFDNISWLVDAMLSVGL LISFLAALLLKSQGYGEWAKFVDPLILIVLALTMLPPAFKILGPALRDVLGIAPDTLDDQVRQVMDAAKVEHGFDDYVSY VQKHGRARFIEIHVVLPANYRLQSVGQLDVLREEISAKLGKPDAARWLTISFTGDRKWIA
Specific function: Unknown
COG id: COG3965
COG function: function code P; Predicted Co/Zn/Cd cation transporters
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 33658; Mature: 33527
Theoretical pI: Translated: 9.46; Mature: 9.46
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSNRGEQSLLKQSTILMFAVSIAGIATGFVSGSQSILFDGFFSLIATFIKVLMLITAKLI CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH AKQSNQRFQFGFWHLEPMVLLIEGSFLLLIAIYAFLNGVFGIINGGREIELGLVIIYAAV HHCCCCCEEEEEEECCCEEEEECCHHHHHHHHHHHHHHHHHHHCCCCEEHHHHHHHHHHH FTVVEFAYFFYVRHRNRKFKSSLIQFDNISWLVDAMLSVGLLISFLAALLLKSQGYGEWA HHHHHHHHHHHHHHCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHH KFVDPLILIVLALTMLPPAFKILGPALRDVLGIAPDTLDDQVRQVMDAAKVEHGFDDYVS HHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCHHHHHH YVQKHGRARFIEIHVVLPANYRLQSVGQLDVLREEISAKLGKPDAARWLTISFTGDRKWI HHHHCCCEEEEEEEEEECCCCCHHHCCHHHHHHHHHHHHCCCCCCCEEEEEEEECCCCCC A C >Mature Secondary Structure SNRGEQSLLKQSTILMFAVSIAGIATGFVSGSQSILFDGFFSLIATFIKVLMLITAKLI CCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH AKQSNQRFQFGFWHLEPMVLLIEGSFLLLIAIYAFLNGVFGIINGGREIELGLVIIYAAV HHCCCCCEEEEEEECCCEEEEECCHHHHHHHHHHHHHHHHHHHCCCCEEHHHHHHHHHHH FTVVEFAYFFYVRHRNRKFKSSLIQFDNISWLVDAMLSVGLLISFLAALLLKSQGYGEWA HHHHHHHHHHHHHHCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHH KFVDPLILIVLALTMLPPAFKILGPALRDVLGIAPDTLDDQVRQVMDAAKVEHGFDDYVS HHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCHHHHHH YVQKHGRARFIEIHVVLPANYRLQSVGQLDVLREEISAKLGKPDAARWLTISFTGDRKWI HHHHCCCEEEEEEEEEECCCCCHHHCCHHHHHHHHHHHHCCCCCCCEEEEEEEECCCCCC A C
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA