| Definition | Pseudomonas fluorescens Pf0-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007492 |
| Length | 6,438,405 |
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The map label for this gene is yhjG [H]
Identifier: 77456794
GI number: 77456794
Start: 658986
End: 661061
Strand: Direct
Name: yhjG [H]
Synonym: Pfl01_0566
Alternate gene names: 77456794
Gene position: 658986-661061 (Clockwise)
Preceding gene: 77456786
Following gene: 77456797
Centisome position: 10.24
GC content: 62.76
Gene sequence:
>2076_bases ATGACGCGCACGCGTAAAATCTTCGTCTGGACCTTCGCCACCCTCGTGCTGCTTCTGGCGGTGTTGGTTCTGATCATCGT GTTTTTCGACTGGAACCGGATCAAGCCGCCGCTCAACGCCAAAGTCTCGGAAGAATTGCACCGACCGTTCGCCATCAACG GCAACCTGTCGGTGGTCTGGCGGCGTGAACTCGACGAGGGCGGCTGGCGCGCCTGGGTGCCGTGGCCGCATGTGGTGGCC GAAGACCTGACGCTGGGCAATCCCGACTGGTCGAAGCAACCGCAGATGGTCACCCTTAAACGGGTCGAGCTGCGCATTTC GCCACTGGCCTTGCTGGCGCAACGGGTCGCGATCCCGCGCATCGACCTGACCGAACCCAACGCGCAACTGCAGCGTCTGG CTGACGGCCGCGCCAACTGGACCTTCAAGTTCGATCCCAAGGACCCGAATGCCGAGCCCTCGAACTGGGTGGTCGATATC GGCGCCATCGGCTTCGACAAGGGCCACGTCACTCTGGATGACCAGACCCTCAAGACCAACCTCAACCTGCTGATCGATCC GCTGGGCAAGCCGATTCCGTTCAGTGATATCGTCGGCGACAAAGCCGCGAAAACCGCGCAGGACAAGGGCGGCGCACCGC AGGATTACGCCTTCGGCCTGAAAGTCACCGGCCAGTACCACGGCCAGAAACTCGCCGGTCAGGGCAAGATCGGCGGTCTG CTGGCCCTGCAGGACGCGAGCAAACCGTTCCCGTTGCAGGCCCAGGCGAAGATTGGCGATACCAGCGTCGAACTCGCCGG CACATTGACCGATCCGCTGAATCTCGGTGCCCTCGATCTGCGCCTGAAACTGGCGGGTGCCAGCCTCGGCAACCTGTATC CGCTGACCGGCGTGACCCTGCCGGACACCCCGCCGTACGCCACCGACGGTCACTTGATCGCCAAGCTGCATGAGCCGGAC GGCGCGCAGTTCCGCTACGAACAGTTCAACGGCAAGATCGGCAGCAGCGACATTCATGGCGATCTGGCCTATGTCGCCAG CCAGCCACGGCCCAAGCTGAGTGGCGCGCTGCTGTCCAATCAACTGTTGTTCGCCGACCTCGCACCGCTGATCGGTGCAG ACTCCAATGCCAAGCAGAAGGCCCGTGGCGGCGAAAGCAAACAGCCGGCAGACAAAGTGCTGCCGGTGGAAGAGTTCAAG ACCGAGCGCTGGCGCGACATGGACGCCGACGTCGAATTCACCGGCAAGCGCATCGTCCACAGCGAAGAACTGCCGTTCAC CGACCTCTATACCCACCTGAAACTCAACGACGGCGAACTGAGCCTGGAGCCACTGCGCTTTGGCGTGGCCGGCGGCAATC TCGATGCGCAGATTCGGCTCAACGGACGTACCGAGCCGCTGGAAGGCCGGGCCAGACTGACCGCGCGCAAGTTCAAGCTC AAACAGCTGTTCCCGACCTTCGAACCGATGAAGACCAGTTTCGGCGAGCTCAACGGCGATGCCGACATCGCCGGTCGCGG CAACTCGGTGGCCAAGTTGCTGGGCGGCGCCAACGGCAACCTGAAGATGCTGATCAACGACGGCGCGATCAGTCGTGAGT TGATGGAGCTGGCAGGCCTCAACGTCGGCAACTACGTGGTCGGCAAGATCTTTGGCGACAAGGAAGTGAAGATCAATTGC GCGGCGGCGGACTTCGATATCAAGACCGGTCTGGCGACGACAAGACTGTTTGTGTTCGATACCGAGAACGCAATCATCTA CATCGACGGCACGGCGAACATGGCCACCGAGCAACTGGATCTGACGGTGACGCCGGAATCCAAGGGCTGGCGCCTGATTT CCCTGCGCTCGCCGTTGTATGTACGGGGCAAGTTCATCAAGCCGGATGCGGGGGTGAAAGCGGTGCCGTTGATGTTGCGC GGGGCGGGGATGGTGGCGCTGGGCGTGATCGCTGCGCCGGCGGCGGGGCTGCTGGCGCTGGTGGCGCCGAGTGGTGGCGA GCCGAATCAGTGCGCGCCGTTGCTGGAGCAGATGAAGGCGGGCAAGGCGCCAGCGACTGTCAAACCGACCAAATGA
Upstream 100 bases:
>100_bases CGGGCTGTTTGTCAGTCACAGATTTCATGAGGGCCATCACGGCCCGCCGTTTCAGCTGCGTCGTGCCAATGGATGCAGTC GTCTTCAGGAGCTTTGTGCA
Downstream 100 bases:
>100_bases TTTTGTAGCGTTTAGAAGAAAGCAATCGCGGGCAAGCCCGCTCCCACAGGTTCAGTGAAATCCTGTGGGAGCGGGCTTGC CCGCGATTGGATCTGGAGGA
Product: AsmA
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 691; Mature: 690
Protein sequence:
>691_residues MTRTRKIFVWTFATLVLLLAVLVLIIVFFDWNRIKPPLNAKVSEELHRPFAINGNLSVVWRRELDEGGWRAWVPWPHVVA EDLTLGNPDWSKQPQMVTLKRVELRISPLALLAQRVAIPRIDLTEPNAQLQRLADGRANWTFKFDPKDPNAEPSNWVVDI GAIGFDKGHVTLDDQTLKTNLNLLIDPLGKPIPFSDIVGDKAAKTAQDKGGAPQDYAFGLKVTGQYHGQKLAGQGKIGGL LALQDASKPFPLQAQAKIGDTSVELAGTLTDPLNLGALDLRLKLAGASLGNLYPLTGVTLPDTPPYATDGHLIAKLHEPD GAQFRYEQFNGKIGSSDIHGDLAYVASQPRPKLSGALLSNQLLFADLAPLIGADSNAKQKARGGESKQPADKVLPVEEFK TERWRDMDADVEFTGKRIVHSEELPFTDLYTHLKLNDGELSLEPLRFGVAGGNLDAQIRLNGRTEPLEGRARLTARKFKL KQLFPTFEPMKTSFGELNGDADIAGRGNSVAKLLGGANGNLKMLINDGAISRELMELAGLNVGNYVVGKIFGDKEVKINC AAADFDIKTGLATTRLFVFDTENAIIYIDGTANMATEQLDLTVTPESKGWRLISLRSPLYVRGKFIKPDAGVKAVPLMLR GAGMVALGVIAAPAAGLLALVAPSGGEPNQCAPLLEQMKAGKAPATVKPTK
Sequences:
>Translated_691_residues MTRTRKIFVWTFATLVLLLAVLVLIIVFFDWNRIKPPLNAKVSEELHRPFAINGNLSVVWRRELDEGGWRAWVPWPHVVA EDLTLGNPDWSKQPQMVTLKRVELRISPLALLAQRVAIPRIDLTEPNAQLQRLADGRANWTFKFDPKDPNAEPSNWVVDI GAIGFDKGHVTLDDQTLKTNLNLLIDPLGKPIPFSDIVGDKAAKTAQDKGGAPQDYAFGLKVTGQYHGQKLAGQGKIGGL LALQDASKPFPLQAQAKIGDTSVELAGTLTDPLNLGALDLRLKLAGASLGNLYPLTGVTLPDTPPYATDGHLIAKLHEPD GAQFRYEQFNGKIGSSDIHGDLAYVASQPRPKLSGALLSNQLLFADLAPLIGADSNAKQKARGGESKQPADKVLPVEEFK TERWRDMDADVEFTGKRIVHSEELPFTDLYTHLKLNDGELSLEPLRFGVAGGNLDAQIRLNGRTEPLEGRARLTARKFKL KQLFPTFEPMKTSFGELNGDADIAGRGNSVAKLLGGANGNLKMLINDGAISRELMELAGLNVGNYVVGKIFGDKEVKINC AAADFDIKTGLATTRLFVFDTENAIIYIDGTANMATEQLDLTVTPESKGWRLISLRSPLYVRGKFIKPDAGVKAVPLMLR GAGMVALGVIAAPAAGLLALVAPSGGEPNQCAPLLEQMKAGKAPATVKPTK >Mature_690_residues TRTRKIFVWTFATLVLLLAVLVLIIVFFDWNRIKPPLNAKVSEELHRPFAINGNLSVVWRRELDEGGWRAWVPWPHVVAE DLTLGNPDWSKQPQMVTLKRVELRISPLALLAQRVAIPRIDLTEPNAQLQRLADGRANWTFKFDPKDPNAEPSNWVVDIG AIGFDKGHVTLDDQTLKTNLNLLIDPLGKPIPFSDIVGDKAAKTAQDKGGAPQDYAFGLKVTGQYHGQKLAGQGKIGGLL ALQDASKPFPLQAQAKIGDTSVELAGTLTDPLNLGALDLRLKLAGASLGNLYPLTGVTLPDTPPYATDGHLIAKLHEPDG AQFRYEQFNGKIGSSDIHGDLAYVASQPRPKLSGALLSNQLLFADLAPLIGADSNAKQKARGGESKQPADKVLPVEEFKT ERWRDMDADVEFTGKRIVHSEELPFTDLYTHLKLNDGELSLEPLRFGVAGGNLDAQIRLNGRTEPLEGRARLTARKFKLK QLFPTFEPMKTSFGELNGDADIAGRGNSVAKLLGGANGNLKMLINDGAISRELMELAGLNVGNYVVGKIFGDKEVKINCA AADFDIKTGLATTRLFVFDTENAIIYIDGTANMATEQLDLTVTPESKGWRLISLRSPLYVRGKFIKPDAGVKAVPLMLRG AGMVALGVIAAPAAGLLALVAPSGGEPNQCAPLLEQMKAGKAPATVKPTK
Specific function: Unknown
COG id: COG2982
COG function: function code M; Uncharacterized protein involved in outer membrane biogenesis
Gene ontology:
Cell location: Cell membrane; Single-pass membrane protein (Potential) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI226510981, Length=689, Percent_Identity=53.1204644412192, Blast_Score=728, Evalue=0.0,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR007844 [H]
Pfam domain/function: PF05170 AsmA [H]
EC number: NA
Molecular weight: Translated: 74852; Mature: 74721
Theoretical pI: Translated: 8.84; Mature: 8.84
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 1.7 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 1.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTRTRKIFVWTFATLVLLLAVLVLIIVFFDWNRIKPPLNAKVSEELHRPFAINGNLSVVW CCCCEEEEEHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHCCCEEECCCEEEEE RRELDEGGWRAWVPWPHVVAEDLTLGNPDWSKQPQMVTLKRVELRISPLALLAQRVAIPR EEECCCCCCEEECCCHHHHHHHCCCCCCCCCCCCCEEEEEEEEEEECHHHHHHHHHCCCE IDLTEPNAQLQRLADGRANWTFKFDPKDPNAEPSNWVVDIGAIGFDKGHVTLDDQTLKTN EECCCCCHHHHHHHCCCCCEEEEECCCCCCCCCCCEEEEEEEEEECCCEEEECCCEEECC LNLLIDPLGKPIPFSDIVGDKAAKTAQDKGGAPQDYAFGLKVTGQYHGQKLAGQGKIGGL CEEEEECCCCCCCHHHHCCCHHHHHHHHCCCCCCCEEEEEEEECCCCCCEECCCCCCCCE LALQDASKPFPLQAQAKIGDTSVELAGTLTDPLNLGALDLRLKLAGASLGNLYPLTGVTL EEEECCCCCCCCEEECCCCCCEEEEEEEECCCCCCCEEEEEEEEECCCCCCEEEECCEEC PDTPPYATDGHLIAKLHEPDGAQFRYEQFNGKIGSSDIHGDLAYVASQPRPKLSGALLSN CCCCCCCCCCCEEEEEECCCCCCEEEHHHCCCCCCCCCCCCCCEECCCCCCCCCHHHHCC QLLFADLAPLIGADSNAKQKARGGESKQPADKVLPVEEFKTERWRDMDADVEFTGKRIVH CCHHHHHHHHHCCCCCCHHHHCCCCCCCCHHHCCCHHHHHHHHHCCCCCCEEECCCEEEE SEELPFTDLYTHLKLNDGELSLEPLRFGVAGGNLDAQIRLNGRTEPLEGRARLTARKFKL CCCCCHHHEEEEEEECCCCEEEEEEEEEEECCCEEEEEEECCCCCCCCCCHHHHHHHHHH KQLFPTFEPMKTSFGELNGDADIAGRGNSVAKLLGGANGNLKMLINDGAISRELMELAGL HHHCCCCCHHHHHHHCCCCCCEECCCCCHHHHHHCCCCCCEEEEEECCHHHHHHHHHHCC NVGNYVVGKIFGDKEVKINCAAADFDIKTGLATTRLFVFDTENAIIYIDGTANMATEQLD CCCCEEEEEEECCCEEEEEEEEECCEECCCCEEEEEEEEECCCEEEEEECCCCCCEEEEE LTVTPESKGWRLISLRSPLYVRGKFIKPDAGVKAVPLMLRGAGMVALGVIAAPAAGLLAL EEECCCCCCEEEEEECCCEEEEEEEECCCCCCEEEEEEEECCCHHHHHHHHCCCCCEEEE VAPSGGEPNQCAPLLEQMKAGKAPATVKPTK EECCCCCCCHHHHHHHHHHCCCCCCCCCCCC >Mature Secondary Structure TRTRKIFVWTFATLVLLLAVLVLIIVFFDWNRIKPPLNAKVSEELHRPFAINGNLSVVW CCCEEEEEHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHCCCEEECCCEEEEE RRELDEGGWRAWVPWPHVVAEDLTLGNPDWSKQPQMVTLKRVELRISPLALLAQRVAIPR EEECCCCCCEEECCCHHHHHHHCCCCCCCCCCCCCEEEEEEEEEEECHHHHHHHHHCCCE IDLTEPNAQLQRLADGRANWTFKFDPKDPNAEPSNWVVDIGAIGFDKGHVTLDDQTLKTN EECCCCCHHHHHHHCCCCCEEEEECCCCCCCCCCCEEEEEEEEEECCCEEEECCCEEECC LNLLIDPLGKPIPFSDIVGDKAAKTAQDKGGAPQDYAFGLKVTGQYHGQKLAGQGKIGGL CEEEEECCCCCCCHHHHCCCHHHHHHHHCCCCCCCEEEEEEEECCCCCCEECCCCCCCCE LALQDASKPFPLQAQAKIGDTSVELAGTLTDPLNLGALDLRLKLAGASLGNLYPLTGVTL EEEECCCCCCCCEEECCCCCCEEEEEEEECCCCCCCEEEEEEEEECCCCCCEEEECCEEC PDTPPYATDGHLIAKLHEPDGAQFRYEQFNGKIGSSDIHGDLAYVASQPRPKLSGALLSN CCCCCCCCCCCEEEEEECCCCCCEEEHHHCCCCCCCCCCCCCCEECCCCCCCCCHHHHCC QLLFADLAPLIGADSNAKQKARGGESKQPADKVLPVEEFKTERWRDMDADVEFTGKRIVH CCHHHHHHHHHCCCCCCHHHHCCCCCCCCHHHCCCHHHHHHHHHCCCCCCEEECCCEEEE SEELPFTDLYTHLKLNDGELSLEPLRFGVAGGNLDAQIRLNGRTEPLEGRARLTARKFKL CCCCCHHHEEEEEEECCCCEEEEEEEEEEECCCEEEEEEECCCCCCCCCCHHHHHHHHHH KQLFPTFEPMKTSFGELNGDADIAGRGNSVAKLLGGANGNLKMLINDGAISRELMELAGL HHHCCCCCHHHHHHHCCCCCCEECCCCCHHHHHHCCCCCCEEEEEECCHHHHHHHHHHCC NVGNYVVGKIFGDKEVKINCAAADFDIKTGLATTRLFVFDTENAIIYIDGTANMATEQLD CCCCEEEEEEECCCEEEEEEEEECCEECCCCEEEEEEEEECCCEEEEEECCCCCCEEEEE LTVTPESKGWRLISLRSPLYVRGKFIKPDAGVKAVPLMLRGAGMVALGVIAAPAAGLLAL EEECCCCCCEEEEEECCCEEEEEEEECCCCCCEEEEEEEECCCHHHHHHHHCCCCCEEEE VAPSGGEPNQCAPLLEQMKAGKAPATVKPTK EECCCCCCCHHHHHHHHHHCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 8041620; 9278503 [H]