| Definition | Pseudomonas fluorescens Pf0-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007492 |
| Length | 6,438,405 |
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The map label for this gene is yxlA [H]
Identifier: 77456721
GI number: 77456721
Start: 572127
End: 573419
Strand: Direct
Name: yxlA [H]
Synonym: Pfl01_0493
Alternate gene names: 77456721
Gene position: 572127-573419 (Clockwise)
Preceding gene: 77456720
Following gene: 77456723
Centisome position: 8.89
GC content: 63.73
Gene sequence:
>1293_bases TTGAGCACTCAACCCGGTACTTATTCCCCCGACCTCGCCGTGCCCGCCAACCAGCGTGTATTCGGCGGTCGCGATCTGTT TTCCCTGTGGTTTTCCCTCGGCATCGGCCTGATGGTCTTGCAGACCGGTGCATTGCTGGCGCCGGGGCTGGGCCTGTCGG GATCGCTGCTGGCGATTTTCCTCGGCACCCTGGTCGGCGTCCTGTTGCTGGCCGCCGTTGGCGTGATCGGCAGCGACACC GGCCTGTCGTCGATGGCCGCGCTGAAACTCAGCCTCGGCAGCAAAGGTGCGAGCCTGCCGGCGCTGCTCAACCTGCTGCA ACTGATCGGATGGGGCTCGTTCGAAATTATCGTCATGCGCGACGCCGCCAGTCTGCTCGGCACCCGTGCGTTCAGCGAAG GTTCGCTGTGGGCCAGTCCGATGTTGTGGACGCTGTGCTTCGGCGCATTGGCGACGTTGCTCGCGATCAGCGGGCCGTTG ACGTTCGTGCGCAAGATCCTGCGCAAGTGGGGCATCTGGCTGATTCTGGCCGCGTGCATCTGGCTGACCTGGAACCTGTT CGCCAAGGCTGATCTCGCCGCCTTGTGGGCACAGGCCGGGGATGGCTCGATGTCACTCGCCGTGGGCTTCGACATTGCGA TTGCGATGCCGCTGTCGTGGCTGCCGCTGATCGCCGACTACTCGCGTTTCGGCCAGCGGGCGAAGAACGTGTTCGGCGGC ACGGCCATCGGGTTTTTCATCGGCAACTTCTGGCTGATGAGTCTCGGCGTGGCCTACACCCTGGCCTTCGCGCCGAGCGG TGAAGTCAACGCGCTGCTGCTGGCACTGGCCGGTGCGGGTCTGGGTATTCCGCTGCTGCTGATTCTGCTGGACGAGTCGG AGAACGCTTTCGCCGACATTCATTCGGCAGCGGTTTCCAGCGGGATTCTGTTGCGTCTGAAAGTCGAGCATCTGGCGCTG GCCATCGGTGTGATCTGCACCCTGATCGCCTTGCTCGCGCCATTGGCGCAATACCAGAACTTCCTGCTGCTGATCGGTTC GGTGTTTGCACCGCTGTTCGGCGTGGTGCTGGTGGATCACTTCATCCTGCGCAAACGCAGTGCCCAAGTGGCGTCGGCCG CGTTGCGCTGGCCGGCACTATTGGCCTGGCTGGGTGGCATCAGCACCTATCACTTGCTGGCCAATCTGTATCCGGATGTC GGCGCGACCCTGCCGGCGCTGGTGCTGGCAGGGCTGCTGCAACTGGTGCTCGGCCGGGCTTTCAGTTACGGCCGGGAAAC AGCTCGGGCTTGA
Upstream 100 bases:
>100_bases CGTCTAGGCGTCGGACCGTCCGCACCGATCGTTCCCACGCAGAGCGTGGGAACGATCAACGGGTCAGCACAACAACAAAT GTCCCTCTGAGATAACACCC
Downstream 100 bases:
>100_bases GAATGCCGTTCAGGCGCGGGTAAGGGATCTTCAGTTCGACGTGGCCCAGCGCATAAGGCGCGATGGTGGTCACGTCGTAC TTGAGGATCACACCGCCGTA
Product: cytosine/purines, uracil, thiamine, allantoin permease
Products: Proton [Cytoplasm]; cytosine [Cytoplasm] [C]
Alternate protein names: NA
Number of amino acids: Translated: 430; Mature: 429
Protein sequence:
>430_residues MSTQPGTYSPDLAVPANQRVFGGRDLFSLWFSLGIGLMVLQTGALLAPGLGLSGSLLAIFLGTLVGVLLLAAVGVIGSDT GLSSMAALKLSLGSKGASLPALLNLLQLIGWGSFEIIVMRDAASLLGTRAFSEGSLWASPMLWTLCFGALATLLAISGPL TFVRKILRKWGIWLILAACIWLTWNLFAKADLAALWAQAGDGSMSLAVGFDIAIAMPLSWLPLIADYSRFGQRAKNVFGG TAIGFFIGNFWLMSLGVAYTLAFAPSGEVNALLLALAGAGLGIPLLLILLDESENAFADIHSAAVSSGILLRLKVEHLAL AIGVICTLIALLAPLAQYQNFLLLIGSVFAPLFGVVLVDHFILRKRSAQVASAALRWPALLAWLGGISTYHLLANLYPDV GATLPALVLAGLLQLVLGRAFSYGRETARA
Sequences:
>Translated_430_residues MSTQPGTYSPDLAVPANQRVFGGRDLFSLWFSLGIGLMVLQTGALLAPGLGLSGSLLAIFLGTLVGVLLLAAVGVIGSDT GLSSMAALKLSLGSKGASLPALLNLLQLIGWGSFEIIVMRDAASLLGTRAFSEGSLWASPMLWTLCFGALATLLAISGPL TFVRKILRKWGIWLILAACIWLTWNLFAKADLAALWAQAGDGSMSLAVGFDIAIAMPLSWLPLIADYSRFGQRAKNVFGG TAIGFFIGNFWLMSLGVAYTLAFAPSGEVNALLLALAGAGLGIPLLLILLDESENAFADIHSAAVSSGILLRLKVEHLAL AIGVICTLIALLAPLAQYQNFLLLIGSVFAPLFGVVLVDHFILRKRSAQVASAALRWPALLAWLGGISTYHLLANLYPDV GATLPALVLAGLLQLVLGRAFSYGRETARA >Mature_429_residues STQPGTYSPDLAVPANQRVFGGRDLFSLWFSLGIGLMVLQTGALLAPGLGLSGSLLAIFLGTLVGVLLLAAVGVIGSDTG LSSMAALKLSLGSKGASLPALLNLLQLIGWGSFEIIVMRDAASLLGTRAFSEGSLWASPMLWTLCFGALATLLAISGPLT FVRKILRKWGIWLILAACIWLTWNLFAKADLAALWAQAGDGSMSLAVGFDIAIAMPLSWLPLIADYSRFGQRAKNVFGGT AIGFFIGNFWLMSLGVAYTLAFAPSGEVNALLLALAGAGLGIPLLLILLDESENAFADIHSAAVSSGILLRLKVEHLALA IGVICTLIALLAPLAQYQNFLLLIGSVFAPLFGVVLVDHFILRKRSAQVASAALRWPALLAWLGGISTYHLLANLYPDVG ATLPALVLAGLLQLVLGRAFSYGRETARA
Specific function: Required For Cytosine Transport Into The Cell. [C]
COG id: COG1457
COG function: function code F; Purine-cytosine permease and related proteins
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the purine-cytosine permease family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001248 [H]
Pfam domain/function: PF02133 Transp_cyt_pur [H]
EC number: NA
Molecular weight: Translated: 45157; Mature: 45026
Theoretical pI: Translated: 9.12; Mature: 9.12
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSTQPGTYSPDLAVPANQRVFGGRDLFSLWFSLGIGLMVLQTGALLAPGLGLSGSLLAIF CCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCHHHCCCCCCCHHHHHHH LGTLVGVLLLAAVGVIGSDTGLSSMAALKLSLGSKGASLPALLNLLQLIGWGSFEIIVMR HHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCEEEEEEE DAASLLGTRAFSEGSLWASPMLWTLCFGALATLLAISGPLTFVRKILRKWGIWLILAACI CHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHH WLTWNLFAKADLAALWAQAGDGSMSLAVGFDIAIAMPLSWLPLIADYSRFGQRAKNVFGG HHHHHHHHHHHHHHHHHHCCCCCEEEEECHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCC TAIGFFIGNFWLMSLGVAYTLAFAPSGEVNALLLALAGAGLGIPLLLILLDESENAFADI HHHHHHHHHHHHHHHHHHHHEEECCCCCHHHHHHHHHCCCCCCEEEEEEECCCCCHHHHH HSAAVSSGILLRLKVEHLALAIGVICTLIALLAPLAQYQNFLLLIGSVFAPLFGVVLVDH HHHHHCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH FILRKRSAQVASAALRWPALLAWLGGISTYHLLANLYPDVGATLPALVLAGLLQLVLGRA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHH FSYGRETARA HHHHHHHCCC >Mature Secondary Structure STQPGTYSPDLAVPANQRVFGGRDLFSLWFSLGIGLMVLQTGALLAPGLGLSGSLLAIF CCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCHHHCCCCCCCHHHHHHH LGTLVGVLLLAAVGVIGSDTGLSSMAALKLSLGSKGASLPALLNLLQLIGWGSFEIIVMR HHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCEEEEEEE DAASLLGTRAFSEGSLWASPMLWTLCFGALATLLAISGPLTFVRKILRKWGIWLILAACI CHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHH WLTWNLFAKADLAALWAQAGDGSMSLAVGFDIAIAMPLSWLPLIADYSRFGQRAKNVFGG HHHHHHHHHHHHHHHHHHCCCCCEEEEECHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCC TAIGFFIGNFWLMSLGVAYTLAFAPSGEVNALLLALAGAGLGIPLLLILLDESENAFADI HHHHHHHHHHHHHHHHHHHHEEECCCCCHHHHHHHHHCCCCCCEEEEEEECCCCCHHHHH HSAAVSSGILLRLKVEHLALAIGVICTLIALLAPLAQYQNFLLLIGSVFAPLFGVVLVDH HHHHHCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH FILRKRSAQVASAALRWPALLAWLGGISTYHLLANLYPDVGATLPALVLAGLLQLVLGRA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHH FSYGRETARA HHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: Proton [Periplasm]; cytosine [Periplasm] [C]
Specific reaction: Proton [Periplasm] + cytosine [Periplasm] = Proton [Cytoplasm] + cytosine [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 8969509; 9384377 [H]