| Definition | Pseudomonas fluorescens Pf0-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007492 |
| Length | 6,438,405 |
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The map label for this gene is 77456571
Identifier: 77456571
GI number: 77456571
Start: 386745
End: 388034
Strand: Reverse
Name: 77456571
Synonym: Pfl01_0343
Alternate gene names: NA
Gene position: 388034-386745 (Counterclockwise)
Preceding gene: 77456572
Following gene: 77456570
Centisome position: 6.03
GC content: 57.36
Gene sequence:
>1290_bases ATGAAGTGGTTACGGGCTATCGCCCTGATGGCCGGCCTCGCCCGCTCAACAACTGGCGCTGCCGAGTTCTATGAAGACAA GCCGCTGGCTCACCCGCTGATCCAGGGCTTGCAGGAAAGCTCGATGACTCTGGCGTTCATCAAGGAAACGAACGGCGTCA AAGGCTATTACTGCCGTTGCGACACGCCGGGCGAACGCCCGCAACTGCTTGATGAGTTCGGTCAGGTGAACATCGAATCG GTTTTTCTCATGTCGCTCGACAGTGAGGATCCGACCCGCTTCGTGCTTTTTCGGCAAAACGACCGCTACAAAATCTACGC CTACAAATACAACGCCAACGACCACCTCTACAGCCGCGTCACGCGATTGCAGCCGGCGCTGGACCGCATCGCCGAAGGTC GCAAACACCTCGACGCCCTGACCATCAAGAAGGCTCTGAGCCAAATCACCCCGCTCAACTACAGCCTCTTCCTTGAAGAG TCCGGCATACCGGAATTCGACCAGCTCGATTTCAGCCAAGGGAAACTGGTGAGCTTTTACGGCCAGTACTACGACCCACT GAGCGACCCGACGCCAGATGACGAACCTTACTTCTTCAAGAAGACCTATCAGGAAAAAAACGGCCGGTTCCTTACCGTTA CTTTCTGGCGATGGCTCGACCAGACGCTCGTCGAGGGCAAGCGCACGCTCTACAACTATCGGGTGAGGCGTATTGCCTGG GAAACCGAACCGACTAAATTCACCGGCAGCGAAGACGGCCAATCGGTGTCTTATGATTCCGGCTCGCTCTCGGCCCAAGG TGCCTACAAGCAGGGCGTTCGGGTCGGTCCGTGGTCTTCTTCCAAAGACGAGAAATATTCGGAGTCCGGCAATTTCGTAG AGGGCAAACGAGAGGGCCAGTGGACGCTGTACCAGGATGGGCAAACACTGGAGGGCGAATTCCACAATGATTTGCGCGAG GGTCGTTGGCAGCTTCTCAACCACGACGACATGGAATGGGTCGCCACCGGATTCCAGACCTATGTCCACGGCCAACTCAA CGGCCTGAGTGAATTGACTGTTCGTGGCACTACCGAGCGCGGCGAATATCGCGATGACAAACGCCAAGGCCTCTGGGTGA CCAGACTCGACAATGGCCACACCCTCAACGTCAACTTCGTTGACGACGTAAAGGAAGGCGAATGGCGCGAAGTCGACGCC AAGGGTGTGCCGGTCCTGATCGAGCACTACAAGGCAGGTGTCCTGTCCGGCGCCCGCGAAAATACGGGTGCGCCTGGCGC CGCGCAATAA
Upstream 100 bases:
>100_bases CAAAGAAAGGCCTCCTTCGGGAGGCCTTTTTTGTGCCCGCTCATCCATGGATAATCCGCCGCTTTCGCGCCACGACCGGC GCCTTGACGAAGGGATTCGC
Downstream 100 bases:
>100_bases ATCCTGAGCGGTTTGTGTGAGCAGATATTGTCCCGATTGGGCTTACCGCCGCCCCTGGCCTATGCTGCAAGCCAATCTCA TTGTTGATCGGTCGAATCCA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 429; Mature: 429
Protein sequence:
>429_residues MKWLRAIALMAGLARSTTGAAEFYEDKPLAHPLIQGLQESSMTLAFIKETNGVKGYYCRCDTPGERPQLLDEFGQVNIES VFLMSLDSEDPTRFVLFRQNDRYKIYAYKYNANDHLYSRVTRLQPALDRIAEGRKHLDALTIKKALSQITPLNYSLFLEE SGIPEFDQLDFSQGKLVSFYGQYYDPLSDPTPDDEPYFFKKTYQEKNGRFLTVTFWRWLDQTLVEGKRTLYNYRVRRIAW ETEPTKFTGSEDGQSVSYDSGSLSAQGAYKQGVRVGPWSSSKDEKYSESGNFVEGKREGQWTLYQDGQTLEGEFHNDLRE GRWQLLNHDDMEWVATGFQTYVHGQLNGLSELTVRGTTERGEYRDDKRQGLWVTRLDNGHTLNVNFVDDVKEGEWREVDA KGVPVLIEHYKAGVLSGARENTGAPGAAQ
Sequences:
>Translated_429_residues MKWLRAIALMAGLARSTTGAAEFYEDKPLAHPLIQGLQESSMTLAFIKETNGVKGYYCRCDTPGERPQLLDEFGQVNIES VFLMSLDSEDPTRFVLFRQNDRYKIYAYKYNANDHLYSRVTRLQPALDRIAEGRKHLDALTIKKALSQITPLNYSLFLEE SGIPEFDQLDFSQGKLVSFYGQYYDPLSDPTPDDEPYFFKKTYQEKNGRFLTVTFWRWLDQTLVEGKRTLYNYRVRRIAW ETEPTKFTGSEDGQSVSYDSGSLSAQGAYKQGVRVGPWSSSKDEKYSESGNFVEGKREGQWTLYQDGQTLEGEFHNDLRE GRWQLLNHDDMEWVATGFQTYVHGQLNGLSELTVRGTTERGEYRDDKRQGLWVTRLDNGHTLNVNFVDDVKEGEWREVDA KGVPVLIEHYKAGVLSGARENTGAPGAAQ >Mature_429_residues MKWLRAIALMAGLARSTTGAAEFYEDKPLAHPLIQGLQESSMTLAFIKETNGVKGYYCRCDTPGERPQLLDEFGQVNIES VFLMSLDSEDPTRFVLFRQNDRYKIYAYKYNANDHLYSRVTRLQPALDRIAEGRKHLDALTIKKALSQITPLNYSLFLEE SGIPEFDQLDFSQGKLVSFYGQYYDPLSDPTPDDEPYFFKKTYQEKNGRFLTVTFWRWLDQTLVEGKRTLYNYRVRRIAW ETEPTKFTGSEDGQSVSYDSGSLSAQGAYKQGVRVGPWSSSKDEKYSESGNFVEGKREGQWTLYQDGQTLEGEFHNDLRE GRWQLLNHDDMEWVATGFQTYVHGQLNGLSELTVRGTTERGEYRDDKRQGLWVTRLDNGHTLNVNFVDDVKEGEWREVDA KGVPVLIEHYKAGVLSGARENTGAPGAAQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 49110; Mature: 49110
Theoretical pI: Translated: 5.15; Mature: 5.15
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 1.6 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 1.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKWLRAIALMAGLARSTTGAAEFYEDKPLAHPLIQGLQESSMTLAFIKETNGVKGYYCRC CHHHHHHHHHHHHHHCCCCCHHHHCCCCCHHHHHHHHHHCCEEEEEEEECCCCCEEEEEC DTPGERPQLLDEFGQVNIESVFLMSLDSEDPTRFVLFRQNDRYKIYAYKYNANDHLYSRV CCCCCCHHHHHHHCCCCEEEEEEEEECCCCCEEEEEEEECCCEEEEEEEECCCCHHHHHH TRLQPALDRIAEGRKHLDALTIKKALSQITPLNYSLFLEESGIPEFDQLDFSQGKLVSFY HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCHHHCCCCCCCEEEEH GQYYDPLSDPTPDDEPYFFKKTYQEKNGRFLTVTFWRWLDQTLVEGKRTLYNYRVRRIAW HHHCCCCCCCCCCCCCCHHHHHHHCCCCCEEEEHHHHHHHHHHHHHHHHHHHEEEEEEEE ETEPTKFTGSEDGQSVSYDSGSLSAQGAYKQGVRVGPWSSSKDEKYSESGNFVEGKREGQ CCCCCEECCCCCCCEEECCCCCCCCCCHHHCCCEECCCCCCCCCCCCCCCCEECCCCCCC WTLYQDGQTLEGEFHNDLREGRWQLLNHDDMEWVATGFQTYVHGQLNGLSELTVRGTTER EEEEECCCEECCHHHHHHHHHHHHHCCCCCHHHHHHHHHHEEECCCCCCEEEEEECCCCC GEYRDDKRQGLWVTRLDNGHTLNVNFVDDVKEGEWREVDAKGVPVLIEHYKAGVLSGARE CCCCCCCCCCEEEEEECCCCEEEEEECCCCCCCCCEEECCCCCCEEEHHHHHHHHCCCCC NTGAPGAAQ CCCCCCCCC >Mature Secondary Structure MKWLRAIALMAGLARSTTGAAEFYEDKPLAHPLIQGLQESSMTLAFIKETNGVKGYYCRC CHHHHHHHHHHHHHHCCCCCHHHHCCCCCHHHHHHHHHHCCEEEEEEEECCCCCEEEEEC DTPGERPQLLDEFGQVNIESVFLMSLDSEDPTRFVLFRQNDRYKIYAYKYNANDHLYSRV CCCCCCHHHHHHHCCCCEEEEEEEEECCCCCEEEEEEEECCCEEEEEEEECCCCHHHHHH TRLQPALDRIAEGRKHLDALTIKKALSQITPLNYSLFLEESGIPEFDQLDFSQGKLVSFY HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCHHHCCCCCCCEEEEH GQYYDPLSDPTPDDEPYFFKKTYQEKNGRFLTVTFWRWLDQTLVEGKRTLYNYRVRRIAW HHHCCCCCCCCCCCCCCHHHHHHHCCCCCEEEEHHHHHHHHHHHHHHHHHHHEEEEEEEE ETEPTKFTGSEDGQSVSYDSGSLSAQGAYKQGVRVGPWSSSKDEKYSESGNFVEGKREGQ CCCCCEECCCCCCCEEECCCCCCCCCCHHHCCCEECCCCCCCCCCCCCCCCEECCCCCCC WTLYQDGQTLEGEFHNDLREGRWQLLNHDDMEWVATGFQTYVHGQLNGLSELTVRGTTER EEEEECCCEECCHHHHHHHHHHHHHCCCCCHHHHHHHHHHEEECCCCCCEEEEEECCCCC GEYRDDKRQGLWVTRLDNGHTLNVNFVDDVKEGEWREVDAKGVPVLIEHYKAGVLSGARE CCCCCCCCCCEEEEEECCCCEEEEEECCCCCCCCCEEECCCCCCEEEHHHHHHHHCCCCC NTGAPGAAQ CCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA