| Definition | Pseudomonas fluorescens Pf0-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007492 |
| Length | 6,438,405 |
Click here to switch to the map view.
The map label for this gene is 77456570
Identifier: 77456570
GI number: 77456570
Start: 386136
End: 386645
Strand: Reverse
Name: 77456570
Synonym: Pfl01_0342
Alternate gene names: NA
Gene position: 386645-386136 (Counterclockwise)
Preceding gene: 77456571
Following gene: 77456569
Centisome position: 6.01
GC content: 63.92
Gene sequence:
>510_bases ATGGGTCGTGGTTTTTTTCTCCTGTTGCTGCTGATCGTCCTGCCCGCTGCCGCACAGATTTACAAGTACACCGACGCCGA CGGCAACACGGTCTACAGCGATCACGCGCCGGACGGCGTGCAGGTGCAGCCGGTGGCGTTGCCGCCGCTCAACAGCGTCC AGCCTCAGGCACCGAATGCGCCCTCTGCCGATACGGCCACTCGTGAGCCGGCGCGTAACGTCTATGAAGTGCTGGAGCTG ACCGGCCTGCCCACCGAGGAAGCCCTGCGCGCCAACAACGGCACCTTCACGGTCAGCGTGCTGATCAAGCCGCGCCTGCA ACCGCCGCATCAATTGCGCCTGCTGCTGGACGACGCGCCTTATGGCCAACCGAGCAACGTGCCGATCCTGCAACTGGTTA ACGTCGACCGGGGCGAGCATCGGCTGGCGGTGCAGGTGATCAATGGCGAGACGATCATTCAGCAGAGTCCGGCGGTGGTG TTCACCGTGCAGCGGGTGCACAAGCCATGA
Upstream 100 bases:
>100_bases AATCCTGAGCGGTTTGTGTGAGCAGATATTGTCCCGATTGGGCTTACCGCCGCCCCTGGCCTATGCTGCAAGCCAATCTC ATTGTTGATCGGTCGAATCC
Downstream 100 bases:
>100_bases GGCGAGGATTGATTGCCTTGTGCCTGTCGCTGATCGCGTTTGGCGCATCGGCCGAGGTGTTCACTTACATCGATGCACAG GGCAATCGCGTCTACACCGA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 169; Mature: 168
Protein sequence:
>169_residues MGRGFFLLLLLIVLPAAAQIYKYTDADGNTVYSDHAPDGVQVQPVALPPLNSVQPQAPNAPSADTATREPARNVYEVLEL TGLPTEEALRANNGTFTVSVLIKPRLQPPHQLRLLLDDAPYGQPSNVPILQLVNVDRGEHRLAVQVINGETIIQQSPAVV FTVQRVHKP
Sequences:
>Translated_169_residues MGRGFFLLLLLIVLPAAAQIYKYTDADGNTVYSDHAPDGVQVQPVALPPLNSVQPQAPNAPSADTATREPARNVYEVLEL TGLPTEEALRANNGTFTVSVLIKPRLQPPHQLRLLLDDAPYGQPSNVPILQLVNVDRGEHRLAVQVINGETIIQQSPAVV FTVQRVHKP >Mature_168_residues GRGFFLLLLLIVLPAAAQIYKYTDADGNTVYSDHAPDGVQVQPVALPPLNSVQPQAPNAPSADTATREPARNVYEVLELT GLPTEEALRANNGTFTVSVLIKPRLQPPHQLRLLLDDAPYGQPSNVPILQLVNVDRGEHRLAVQVINGETIIQQSPAVVF TVQRVHKP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18394; Mature: 18263
Theoretical pI: Translated: 6.09; Mature: 6.09
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 0.6 %Met (Translated Protein) 0.6 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 0.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGRGFFLLLLLIVLPAAAQIYKYTDADGNTVYSDHAPDGVQVQPVALPPLNSVQPQAPNA CCCHHHHHHHHHHHHCHHHEEEEECCCCCEEECCCCCCCCEEEEEECCCCCCCCCCCCCC PSADTATREPARNVYEVLELTGLPTEEALRANNGTFTVSVLIKPRLQPPHQLRLLLDDAP CCCCCCCCCHHHHHHHHHHHCCCCHHHHHHCCCCEEEEEEEEECCCCCCHHEEEEECCCC YGQPSNVPILQLVNVDRGEHRLAVQVINGETIIQQSPAVVFTVQRVHKP CCCCCCCCEEEEEECCCCCCEEEEEEECCCEEEECCCCEEEEEECCCCC >Mature Secondary Structure GRGFFLLLLLIVLPAAAQIYKYTDADGNTVYSDHAPDGVQVQPVALPPLNSVQPQAPNA CCHHHHHHHHHHHHCHHHEEEEECCCCCEEECCCCCCCCEEEEEECCCCCCCCCCCCCC PSADTATREPARNVYEVLELTGLPTEEALRANNGTFTVSVLIKPRLQPPHQLRLLLDDAP CCCCCCCCCHHHHHHHHHHHCCCCHHHHHHCCCCEEEEEEEEECCCCCCHHEEEEECCCC YGQPSNVPILQLVNVDRGEHRLAVQVINGETIIQQSPAVVFTVQRVHKP CCCCCCCCEEEEEECCCCCCEEEEEEECCCEEEECCCCEEEEEECCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA