| Definition | Pseudomonas fluorescens Pf0-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007492 |
| Length | 6,438,405 |
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The map label for this gene is 77456505
Identifier: 77456505
GI number: 77456505
Start: 323742
End: 324173
Strand: Direct
Name: 77456505
Synonym: Pfl01_0277
Alternate gene names: NA
Gene position: 323742-324173 (Clockwise)
Preceding gene: 77456504
Following gene: 77456510
Centisome position: 5.03
GC content: 59.03
Gene sequence:
>432_bases ATGTCCAACCCGATGCCGCAACGCAGCGATTACCCGCACTTCCAGCCGATCACCACGCGCTGGCACGACAACGACGCCTA CGGCCACGTCAACAACGTCACCTATTACAGCTTCTTCGACACGGCGGTGAACACCTACCTGATCCAGGTTGGAGGGTTGG ATATTCATGACGGCGAGGTGGTGGGGTTTGTGGTGAGTTCGTCTTGCGACTACTTCGCGTCGATTGCTTTCCCGGATCGA ATCGAGATCGGTCTGCGGGTCGGTAAGCTGGGCAACAGTTCGGTGCAATACGAACTGGCGGTGTTCAAGGAAGGAGAACA GGAAGCCTGTGCCGCCGGGCGCTTCGTGCATGTATTCGTCGACCGGGCATCCAATCAGCCGGTGTCGATTCCGGCCCGAT TGCGCGAAGCGCTGGAACGCCTGACGGTGTGA
Upstream 100 bases:
>100_bases GGCGATCACTGGCGGCCGGCGCCATTGATCGGCGAGCTGGCGGCGCGAGGCAAGGGTTTTTACCTTTAGACTGAGCAGAT CACTCCAGGAATAGACACTG
Downstream 100 bases:
>100_bases CGGGCAAAAAAAATCGCAGCCCGGGGGAGCTGCGATCTGGGGGTATCAGCTAACGAGGCCAGGCCTCAGTCGCGATAGTA GCGGTGGTGCTTGCGATGGC
Product: thioesterase superfamily protein
Products: NA
Alternate protein names: Thioesterase; Thioesterase Family Protein; Thioesterase Superfamily; Thioesterase/Thiol Ester Dehydrase-Isomerase; Thioesterase Family Protein Domain Protein; 4-Hydroxybenzoyl-CoA Thioesterase; Acyl-CoA Thioesterase; GCN5-Related N-Acetyltransferase; Thioesterase Protein; Acyl-CoA Hydrolase/Thioesterase; Acyl-CoA Hydrolase
Number of amino acids: Translated: 143; Mature: 142
Protein sequence:
>143_residues MSNPMPQRSDYPHFQPITTRWHDNDAYGHVNNVTYYSFFDTAVNTYLIQVGGLDIHDGEVVGFVVSSSCDYFASIAFPDR IEIGLRVGKLGNSSVQYELAVFKEGEQEACAAGRFVHVFVDRASNQPVSIPARLREALERLTV
Sequences:
>Translated_143_residues MSNPMPQRSDYPHFQPITTRWHDNDAYGHVNNVTYYSFFDTAVNTYLIQVGGLDIHDGEVVGFVVSSSCDYFASIAFPDR IEIGLRVGKLGNSSVQYELAVFKEGEQEACAAGRFVHVFVDRASNQPVSIPARLREALERLTV >Mature_142_residues SNPMPQRSDYPHFQPITTRWHDNDAYGHVNNVTYYSFFDTAVNTYLIQVGGLDIHDGEVVGFVVSSSCDYFASIAFPDRI EIGLRVGKLGNSSVQYELAVFKEGEQEACAAGRFVHVFVDRASNQPVSIPARLREALERLTV
Specific function: Unknown
COG id: COG0824
COG function: function code R; Predicted thioesterase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16004; Mature: 15873
Theoretical pI: Translated: 5.13; Mature: 5.13
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSNPMPQRSDYPHFQPITTRWHDNDAYGHVNNVTYYSFFDTAVNTYLIQVGGLDIHDGEV CCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCEEEEEEHHHHHEEEEEEECCEEECCCCE VGFVVSSSCDYFASIAFPDRIEIGLRVGKLGNSSVQYELAVFKEGEQEACAAGRFVHVFV EEEEEECCCCEEEEECCCCEEEEEEEECCCCCCCEEEEEEEEECCCHHHHHCCCEEEEEE DRASNQPVSIPARLREALERLTV ECCCCCCEECHHHHHHHHHHHCC >Mature Secondary Structure SNPMPQRSDYPHFQPITTRWHDNDAYGHVNNVTYYSFFDTAVNTYLIQVGGLDIHDGEV CCCCCCCCCCCCCCCCEEEECCCCCCCCCCCEEEEEEHHHHHEEEEEEECCEEECCCCE VGFVVSSSCDYFASIAFPDRIEIGLRVGKLGNSSVQYELAVFKEGEQEACAAGRFVHVFV EEEEEECCCCEEEEECCCCEEEEEEEECCCCCCCEEEEEEEEECCCHHHHHCCCEEEEEE DRASNQPVSIPARLREALERLTV ECCCCCCEECHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA