| Definition | Pseudomonas fluorescens Pf0-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007492 |
| Length | 6,438,405 |
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The map label for this gene is 77456432
Identifier: 77456432
GI number: 77456432
Start: 242972
End: 243220
Strand: Direct
Name: 77456432
Synonym: Pfl01_0204
Alternate gene names: NA
Gene position: 242972-243220 (Clockwise)
Preceding gene: 77456431
Following gene: 77456433
Centisome position: 3.77
GC content: 53.82
Gene sequence:
>249_bases ATGGAACAGTTGGGCGAACTGATCAGAACTCTGCGCAAAGCGCAAAAACTCTCGCAACAGGCGTTGGCGCAACGTTACGG CATGAGCCGCGCCACCATTTCTGGTATCGAAAACAATACGATTTCTGAAATTGGTCTGCGCAAAGTCGAGGCGATCCTCA ACGGCTTTGGCTATGAGCTGACGGCGGTTCCCGTGAGAGCGCAACGTCCGACACTCGACGCGTTGCAGAAGGCCAATTTC CATGACTGA
Upstream 100 bases:
>100_bases CCGTTTCATCTGAGCTAGACTCGCCCTGAATTGGCATCAAATGCGATGCGTAAACGTAGAATTACGATTTTTTGCACTGT ATATAATGCACGGGTGCGTC
Downstream 100 bases:
>100_bases GCCGACAGATCGCTTGCACATCACCGTCGCTGATAGCCCGGTCGGAACGCTCGGTCGAGGGCAGCCGGGCATGGACAGTG TGTTCAGTTATCGCGAGGAC
Product: XRE family transcriptional regulator
Products: NA
Alternate protein names: Regulatory Protein
Number of amino acids: Translated: 82; Mature: 82
Protein sequence:
>82_residues MEQLGELIRTLRKAQKLSQQALAQRYGMSRATISGIENNTISEIGLRKVEAILNGFGYELTAVPVRAQRPTLDALQKANF HD
Sequences:
>Translated_82_residues MEQLGELIRTLRKAQKLSQQALAQRYGMSRATISGIENNTISEIGLRKVEAILNGFGYELTAVPVRAQRPTLDALQKANF HD >Mature_82_residues MEQLGELIRTLRKAQKLSQQALAQRYGMSRATISGIENNTISEIGLRKVEAILNGFGYELTAVPVRAQRPTLDALQKANF HD
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 9141; Mature: 9141
Theoretical pI: Translated: 10.23; Mature: 10.23
Prosite motif: PS50943 HTH_CROC1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEQLGELIRTLRKAQKLSQQALAQRYGMSRATISGIENNTISEIGLRKVEAILNGFGYEL CHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCE TAVPVRAQRPTLDALQKANFHD EECCCCCCCCHHHHHHHCCCCC >Mature Secondary Structure MEQLGELIRTLRKAQKLSQQALAQRYGMSRATISGIENNTISEIGLRKVEAILNGFGYEL CHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCE TAVPVRAQRPTLDALQKANFHD EECCCCCCCCHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA