| Definition | Pseudomonas fluorescens Pf0-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007492 |
| Length | 6,438,405 |
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The map label for this gene is czcS [H]
Identifier: 77456431
GI number: 77456431
Start: 241469
End: 242857
Strand: Direct
Name: czcS [H]
Synonym: Pfl01_0203
Alternate gene names: 77456431
Gene position: 241469-242857 (Clockwise)
Preceding gene: 77456430
Following gene: 77456432
Centisome position: 3.75
GC content: 64.43
Gene sequence:
>1389_bases ATGCGCGCTAGGTCGATTGCCTGGCGCCTGGCCCTGGCGTTCGCTGCTGTCTGTGCGTTGGTACTCAGTGCGATTGGCGT GTTCCTGTATCGCTCGCTGGCTGCGGAAATCGCCTGGCGCGACGACATGGCGTTGCTCGGTCGCCTGGAACAGGTGCGCG CGCTGCTCGCCGACAGCGACAGCCTCGACGCCCTGCAGGCGCGGCCACGGCTGTACCAGAACATGCTCGGCAACCTCGAC AGTCTGCTGCTGGTGCAACGAGCGGACGGCTCGAACGTGATCACGATCAACCCTCGCCAACGCGCACTGCCGTCCGTGCA GGCCATCCCCCGGGATCAACCGCCGCAACGCCGCGATGTGCTGACCTGGCAGGCGGCGGACGGTGTCGAGCTGGCCCTGT TGTCAGGTCAGGCCCAAGGGCCGAACGGCGAAGCACTGACCGTGATCGCCGGCAAGGTCTTGAGCGAGCGCGAGCAGATG CTCGGCAGCTATCGCCTGCGCTTGTATCTGGCCGTCGGCTTGGGTGCCGTGCTCGCCTTCACGCTGGGTCTGGTGCTGTT GCGCCGAGGTTTGCGGCCTCTGCGCAAGCTGAGTGAAGCGCTGCGCGGCATCGACCTGCGCAGCCTCGACCAACGCGTTC CCACCGCCGGCACGCCAGCGGAATTGCTGGAGCCGGTGCATGCGTTGAACGGCATGCTCGGGCGGCTGGACGACGGCTTC CAGCGCCTCTCACAGTTTTCCGCCGACCTCGCCCACGAAATCCGCACGCCCCTGCATACCTTGCTCGCGAGCAACGGCCA GGCACTGAATTACCCGCGCAGCAGCGCCGAGTATCAGGAAGTGCTGGCTTCAAACATGGAAGAGTTTGAACGGCTCAAGC GCATGGCCGAAAACCTGATGTTTCTCGCCCGCGCCGAGCAAGCTGAGCGAGCGCTCGATCTGCGCACGCTGGAACTGCAC GAAATCGGCGATGAGTTGTGCGACTACTTCGAAGCCCTGGCGGATGACCGGGAAATCCGCCTCGAAAACACGTTCAGCGG AGAATTGCTGGCGGATCAGCAACTGCTGCAACGCGCCTTGGGCAATCTGCTGGCCAACGCCGTACGCCATGCCGATGCCG GCTCGGTCATCAGCCTGCGCCGACGCGATGAGCCAGGCCTGTGCTGGCTGCAAGTCCACAACCTCGGCCCGGTGATCGCG GATGAGCATCTGGGCAAACTGTTCGACCGCTTCTACCGCGTCGACCCGTCCCGCGCGGAGCCAGGAGACTCCGGCGGATT GGGACTGGCGATCGTGCAGTCGATCATGCGGTTGCATGGTGGGCAGGTGCGGGTCAGCAGTGATGCAACGGGTACGGTTT TTGAGCTTGGATTTGTAACCAGTCGCTAA
Upstream 100 bases:
>100_bases GTCGCGGTGCGCCGGCTGCGTTCGAAAGTCGATGATCCGTACATGCCCAAACTGATTCACACCGTGCGCGGGGTCGGCTA TCAACTCGAAGCGCCCGACG
Downstream 100 bases:
>100_bases TCGACCCGCACATGCCGTTTCATCTGAGCTAGACTCGCCCTGAATTGGCATCAAATGCGATGCGTAAACGTAGAATTACG ATTTTTTGCACTGTATATAA
Product: heavy metal sensor signal transduction histidine kinase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 462; Mature: 462
Protein sequence:
>462_residues MRARSIAWRLALAFAAVCALVLSAIGVFLYRSLAAEIAWRDDMALLGRLEQVRALLADSDSLDALQARPRLYQNMLGNLD SLLLVQRADGSNVITINPRQRALPSVQAIPRDQPPQRRDVLTWQAADGVELALLSGQAQGPNGEALTVIAGKVLSEREQM LGSYRLRLYLAVGLGAVLAFTLGLVLLRRGLRPLRKLSEALRGIDLRSLDQRVPTAGTPAELLEPVHALNGMLGRLDDGF QRLSQFSADLAHEIRTPLHTLLASNGQALNYPRSSAEYQEVLASNMEEFERLKRMAENLMFLARAEQAERALDLRTLELH EIGDELCDYFEALADDREIRLENTFSGELLADQQLLQRALGNLLANAVRHADAGSVISLRRRDEPGLCWLQVHNLGPVIA DEHLGKLFDRFYRVDPSRAEPGDSGGLGLAIVQSIMRLHGGQVRVSSDATGTVFELGFVTSR
Sequences:
>Translated_462_residues MRARSIAWRLALAFAAVCALVLSAIGVFLYRSLAAEIAWRDDMALLGRLEQVRALLADSDSLDALQARPRLYQNMLGNLD SLLLVQRADGSNVITINPRQRALPSVQAIPRDQPPQRRDVLTWQAADGVELALLSGQAQGPNGEALTVIAGKVLSEREQM LGSYRLRLYLAVGLGAVLAFTLGLVLLRRGLRPLRKLSEALRGIDLRSLDQRVPTAGTPAELLEPVHALNGMLGRLDDGF QRLSQFSADLAHEIRTPLHTLLASNGQALNYPRSSAEYQEVLASNMEEFERLKRMAENLMFLARAEQAERALDLRTLELH EIGDELCDYFEALADDREIRLENTFSGELLADQQLLQRALGNLLANAVRHADAGSVISLRRRDEPGLCWLQVHNLGPVIA DEHLGKLFDRFYRVDPSRAEPGDSGGLGLAIVQSIMRLHGGQVRVSSDATGTVFELGFVTSR >Mature_462_residues MRARSIAWRLALAFAAVCALVLSAIGVFLYRSLAAEIAWRDDMALLGRLEQVRALLADSDSLDALQARPRLYQNMLGNLD SLLLVQRADGSNVITINPRQRALPSVQAIPRDQPPQRRDVLTWQAADGVELALLSGQAQGPNGEALTVIAGKVLSEREQM LGSYRLRLYLAVGLGAVLAFTLGLVLLRRGLRPLRKLSEALRGIDLRSLDQRVPTAGTPAELLEPVHALNGMLGRLDDGF QRLSQFSADLAHEIRTPLHTLLASNGQALNYPRSSAEYQEVLASNMEEFERLKRMAENLMFLARAEQAERALDLRTLELH EIGDELCDYFEALADDREIRLENTFSGELLADQQLLQRALGNLLANAVRHADAGSVISLRRRDEPGLCWLQVHNLGPVIA DEHLGKLFDRFYRVDPSRAEPGDSGGLGLAIVQSIMRLHGGQVRVSSDATGTVFELGFVTSR
Specific function: Member of the two-component regulatory system CzcS/CzcR involved in the control of cobalt, zinc and cadmium homeostasis. Probably activates CzcR by phosphorylation [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell inner membrane; Single-pass membrane protein (Potential) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 histidine kinase domain [H]
Homologues:
Organism=Escherichia coli, GI1788279, Length=460, Percent_Identity=33.0434782608696, Blast_Score=214, Evalue=7e-57, Organism=Escherichia coli, GI1786783, Length=291, Percent_Identity=40.5498281786942, Blast_Score=211, Evalue=9e-56, Organism=Escherichia coli, GI1786600, Length=220, Percent_Identity=29.0909090909091, Blast_Score=86, Evalue=6e-18, Organism=Escherichia coli, GI1789403, Length=301, Percent_Identity=29.5681063122924, Blast_Score=83, Evalue=4e-17, Organism=Escherichia coli, GI1788393, Length=265, Percent_Identity=25.6603773584906, Blast_Score=79, Evalue=7e-16, Organism=Escherichia coli, GI1790346, Length=264, Percent_Identity=29.1666666666667, Blast_Score=79, Evalue=8e-16, Organism=Escherichia coli, GI1787894, Length=304, Percent_Identity=28.6184210526316, Blast_Score=76, Evalue=4e-15, Organism=Escherichia coli, GI1790551, Length=264, Percent_Identity=29.9242424242424, Blast_Score=75, Evalue=1e-14, Organism=Escherichia coli, GI1790436, Length=219, Percent_Identity=29.6803652968037, Blast_Score=70, Evalue=2e-13, Organism=Escherichia coli, GI48994928, Length=232, Percent_Identity=25.4310344827586, Blast_Score=65, Evalue=9e-12, Organism=Escherichia coli, GI1790861, Length=246, Percent_Identity=27.2357723577236, Blast_Score=65, Evalue=1e-11, Organism=Escherichia coli, GI1786912, Length=208, Percent_Identity=31.25, Blast_Score=63, Evalue=4e-11, Organism=Escherichia coli, GI145693157, Length=214, Percent_Identity=26.1682242990654, Blast_Score=62, Evalue=7e-11, Organism=Escherichia coli, GI87082128, Length=318, Percent_Identity=26.1006289308176, Blast_Score=62, Evalue=9e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003594 - InterPro: IPR003660 - InterPro: IPR004358 - InterPro: IPR006290 - InterPro: IPR003661 - InterPro: IPR005467 - InterPro: IPR009082 [H]
Pfam domain/function: PF00672 HAMP; PF02518 HATPase_c; PF00512 HisKA [H]
EC number: =2.7.13.3 [H]
Molecular weight: Translated: 50912; Mature: 50912
Theoretical pI: Translated: 6.13; Mature: 6.13
Prosite motif: PS50885 HAMP ; PS50109 HIS_KIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRARSIAWRLALAFAAVCALVLSAIGVFLYRSLAAEIAWRDDMALLGRLEQVRALLADSD CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCC SLDALQARPRLYQNMLGNLDSLLLVQRADGSNVITINPRQRALPSVQAIPRDQPPQRRDV CHHHHHHHHHHHHHHHCCHHHEEEEEECCCCCEEEECCHHHHCCCHHCCCCCCCCCCCCC LTWQAADGVELALLSGQAQGPNGEALTVIAGKVLSEREQMLGSYRLRLYLAVGLGAVLAF EEEECCCCCEEEEEECCCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH TLGLVLLRRGLRPLRKLSEALRGIDLRSLDQRVPTAGTPAELLEPVHALNGMLGRLDDGF HHHHHHHHHCCHHHHHHHHHHHCCCHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHH QRLSQFSADLAHEIRTPLHTLLASNGQALNYPRSSAEYQEVLASNMEEFERLKRMAENLM HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHCHHHHHHHHHHHHHHH FLARAEQAERALDLRTLELHEIGDELCDYFEALADDREIRLENTFSGELLADQQLLQRAL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCHHHHHHHHHHHH GNLLANAVRHADAGSVISLRRRDEPGLCWLQVHNLGPVIADEHLGKLFDRFYRVDPSRAE HHHHHHHHHHCCCCCEEEEEECCCCCEEEEEECCCCCHHHHHHHHHHHHHHHCCCCCCCC PGDSGGLGLAIVQSIMRLHGGQVRVSSDATGTVFELGFVTSR CCCCCCHHHHHHHHHHHHCCCEEEECCCCCCCEEEECCCCCC >Mature Secondary Structure MRARSIAWRLALAFAAVCALVLSAIGVFLYRSLAAEIAWRDDMALLGRLEQVRALLADSD CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCC SLDALQARPRLYQNMLGNLDSLLLVQRADGSNVITINPRQRALPSVQAIPRDQPPQRRDV CHHHHHHHHHHHHHHHCCHHHEEEEEECCCCCEEEECCHHHHCCCHHCCCCCCCCCCCCC LTWQAADGVELALLSGQAQGPNGEALTVIAGKVLSEREQMLGSYRLRLYLAVGLGAVLAF EEEECCCCCEEEEEECCCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH TLGLVLLRRGLRPLRKLSEALRGIDLRSLDQRVPTAGTPAELLEPVHALNGMLGRLDDGF HHHHHHHHHCCHHHHHHHHHHHCCCHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHH QRLSQFSADLAHEIRTPLHTLLASNGQALNYPRSSAEYQEVLASNMEEFERLKRMAENLM HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHCHHHHHHHHHHHHHHH FLARAEQAERALDLRTLELHEIGDELCDYFEALADDREIRLENTFSGELLADQQLLQRAL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCHHHHHHHHHHHH GNLLANAVRHADAGSVISLRRRDEPGLCWLQVHNLGPVIADEHLGKLFDRFYRVDPSRAE HHHHHHHHHHCCCCCEEEEEECCCCCEEEEEECCCCCHHHHHHHHHHHHHHHCCCCCCCC PGDSGGLGLAIVQSIMRLHGGQVRVSSDATGTVFELGFVTSR CCCCCCHHHHHHHHHHHHCCCEEEECCCCCCCEEEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 9044283 [H]