| Definition | Pseudomonas fluorescens Pf0-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007492 |
| Length | 6,438,405 |
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The map label for this gene is 77456378
Identifier: 77456378
GI number: 77456378
Start: 182010
End: 182834
Strand: Reverse
Name: 77456378
Synonym: Pfl01_0150
Alternate gene names: NA
Gene position: 182834-182010 (Counterclockwise)
Preceding gene: 77456379
Following gene: 77456377
Centisome position: 2.84
GC content: 54.79
Gene sequence:
>825_bases ATGACGTCATTGGAAAAGGATCTGCAATCACCAGCGCTGACTGCCCTGAAAACCAGACTCACGCGGCGTGTTGCAACTTT GGGCTGCTGCCTTGTCTTGATCGCAAGCTGCAAGACCGAACCGCCCAACACCTTCAAATTCACAGCCGATCTACCACCGG GGTTTGCCTACGTCGCAGCGGTTTATTACGTACCCGAGAAAGGTCAGACCTGCACCCTCGACAGACGCGACAACCTTGCC CCGGTGTTCAACAGCAAGTGGCGGACGGAGTACAAGCCAGATGCCGAGATCACGATTCGCAAGATTGTTAAGGGGTGTCC GTTGGTCGTGAGGCGAATCGAGCTGGAGATCAACTCGAGCTATGGCAAAACACGGGGCGACTTCAGTGGTGACGAAGCCA TGGTTTTCATCCGCGATGATCTGCAGGAGCAGTTCAAAGGCGTATTCAACGAGGCCGGTGAAAGCACCTTCCACGGTCAG TGCGAGTGGTGGTTTCGCACGTCGGGCAAACCGCGAATTCTAAGAAAAATCCTGGATTGCAGAACGGTCGATGCCCAAGG AGCACGTGCCTACGGGAAGACCTTCGGGGCTTTTAACCCTGATCAACTGCCGGGCAAAACTGTGAGGATGAAGATCACCT TGGCAGCGGACGAGCGACCGGCCATCAAGGACACCTGGGTCAAGGTCACTAACGGCTGGAAACGCTGCATGGGCGACAAC TTTGAGGATCAATACGCCTTCTGTTACGGCAACTACACCGACTTCAGCACTTTCACCATGCCGGATGGCCAAGTCTGCAC CATTTATCCAGGTTGCACGGAATAA
Upstream 100 bases:
>100_bases CTTCTGTTACGGCAACTACACCGATTTCAGCACTTTCACCATGCCGGATGGCCAAGTCTGCACCATTTATCCGGGTTGCA CGGAATAAGGAGATTTCGCC
Downstream 100 bases:
>100_bases GGAGATTTCGCCATGACTTCATTTGAAAAGGATCTGCAATCTCCGTTGGGCAGTCGCATGCTGACATGTCCTGCAGGTGG AAAATGGACAAGTTTCCAAC
Product: putative lipoprotein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 274; Mature: 273
Protein sequence:
>274_residues MTSLEKDLQSPALTALKTRLTRRVATLGCCLVLIASCKTEPPNTFKFTADLPPGFAYVAAVYYVPEKGQTCTLDRRDNLA PVFNSKWRTEYKPDAEITIRKIVKGCPLVVRRIELEINSSYGKTRGDFSGDEAMVFIRDDLQEQFKGVFNEAGESTFHGQ CEWWFRTSGKPRILRKILDCRTVDAQGARAYGKTFGAFNPDQLPGKTVRMKITLAADERPAIKDTWVKVTNGWKRCMGDN FEDQYAFCYGNYTDFSTFTMPDGQVCTIYPGCTE
Sequences:
>Translated_274_residues MTSLEKDLQSPALTALKTRLTRRVATLGCCLVLIASCKTEPPNTFKFTADLPPGFAYVAAVYYVPEKGQTCTLDRRDNLA PVFNSKWRTEYKPDAEITIRKIVKGCPLVVRRIELEINSSYGKTRGDFSGDEAMVFIRDDLQEQFKGVFNEAGESTFHGQ CEWWFRTSGKPRILRKILDCRTVDAQGARAYGKTFGAFNPDQLPGKTVRMKITLAADERPAIKDTWVKVTNGWKRCMGDN FEDQYAFCYGNYTDFSTFTMPDGQVCTIYPGCTE >Mature_273_residues TSLEKDLQSPALTALKTRLTRRVATLGCCLVLIASCKTEPPNTFKFTADLPPGFAYVAAVYYVPEKGQTCTLDRRDNLAP VFNSKWRTEYKPDAEITIRKIVKGCPLVVRRIELEINSSYGKTRGDFSGDEAMVFIRDDLQEQFKGVFNEAGESTFHGQC EWWFRTSGKPRILRKILDCRTVDAQGARAYGKTFGAFNPDQLPGKTVRMKITLAADERPAIKDTWVKVTNGWKRCMGDNF EDQYAFCYGNYTDFSTFTMPDGQVCTIYPGCTE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 30955; Mature: 30823
Theoretical pI: Translated: 8.33; Mature: 8.33
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
4.0 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 5.8 %Cys+Met (Translated Protein) 4.0 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 5.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTSLEKDLQSPALTALKTRLTRRVATLGCCLVLIASCKTEPPNTFKFTADLPPGFAYVAA CCCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCCEEEEE VYYVPEKGQTCTLDRRDNLAPVFNSKWRTEYKPDAEITIRKIVKGCPLVVRRIELEINSS EEEECCCCCEEEECCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCEEEEEEEEEEECC YGKTRGDFSGDEAMVFIRDDLQEQFKGVFNEAGESTFHGQCEWWFRTSGKPRILRKILDC CCCCCCCCCCCCEEEEEHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCCHHHHHHHHHH RTVDAQGARAYGKTFGAFNPDQLPGKTVRMKITLAADERPAIKDTWVKVTNGWKRCMGDN CCCCCCCCHHHHHHCCCCCCCCCCCCEEEEEEEEECCCCCCCHHHHEEECCCHHHHHCCC FEDQYAFCYGNYTDFSTFTMPDGQVCTIYPGCTE CCCCEEEEECCCCCCEEEECCCCCEEEECCCCCC >Mature Secondary Structure TSLEKDLQSPALTALKTRLTRRVATLGCCLVLIASCKTEPPNTFKFTADLPPGFAYVAA CCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCCEEEEE VYYVPEKGQTCTLDRRDNLAPVFNSKWRTEYKPDAEITIRKIVKGCPLVVRRIELEINSS EEEECCCCCEEEECCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCEEEEEEEEEEECC YGKTRGDFSGDEAMVFIRDDLQEQFKGVFNEAGESTFHGQCEWWFRTSGKPRILRKILDC CCCCCCCCCCCCEEEEEHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCCHHHHHHHHHH RTVDAQGARAYGKTFGAFNPDQLPGKTVRMKITLAADERPAIKDTWVKVTNGWKRCMGDN CCCCCCCCHHHHHHCCCCCCCCCCCCEEEEEEEEECCCCCCCHHHHEEECCCHHHHHCCC FEDQYAFCYGNYTDFSTFTMPDGQVCTIYPGCTE CCCCEEEEECCCCCCEEEECCCCCEEEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA