Definition Pseudomonas fluorescens Pf0-1 chromosome, complete genome.
Accession NC_007492
Length 6,438,405

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The map label for this gene is 77456379

Identifier: 77456379

GI number: 77456379

Start: 182847

End: 183620

Strand: Reverse

Name: 77456379

Synonym: Pfl01_0151

Alternate gene names: NA

Gene position: 183620-182847 (Counterclockwise)

Preceding gene: 77456380

Following gene: 77456378

Centisome position: 2.85

GC content: 55.56

Gene sequence:

>774_bases
ATGAAGATTCAGCTCAAGAGCATCGTCCTGATCAGCGCCTTCGCGGCACTGGGGGGTTGCCAGGGCAAACCGCCCAACAC
CTTCAAATTCACAGCCGATCTACCACCGGGGTTTGCCTACGTCGCAGCGGTTTATTACGCACCCGAAAAAGGTAAGACCT
GCACCCTCGAGAGACGCGACAACCTTGCCCCGGTGTTCAACAGCAAGTGGCGCACGGACTACAAGCCGGATGCCGAGATC
ACGATTCGCAAGATTGTTAAGGGGTGTCCGTTGGTCGTGAGGCGAATCGAACTGGAGATCAACTCGGCGTACGGCAAGGA
TTGGAGCGACTTCAGCCGTGACGAAGCCATGGTTTTCATCCGCGATGATCTGGAGGAGCAGTTCAAAGGCGTATTCAACG
AGGCCGGTGAAAGCACCTTCCACGGTCAGTGCGAGTGGTGGTTTCGCACCTCGGGCAAACCGCGAATTCTAAGAAAAATC
CTGGATTGCAGAACGGTCGATGCCCAAGGAGCACGTGCCTACGGGAAGACCTTCGGGGCTTTTAACCCTGATCAACTGCC
GGGCAAAACGGTGAGGATGAAGATCACCTTGGCAGCGGACGAGCGACCGGCCATCAAGGACACCTGGGTCAAGGTCACTA
ACGGCTGGAAACGCTGCATGGGCGACAACTTTGAGGATCAATACGCCTTCTGTTACGGCAACTACACCGATTTCAGCACT
TTCACCATGCCGGATGGCCAAGTCTGCACCATTTATCCGGGTTGCACGGAATAA

Upstream 100 bases:

>100_bases
CCCTCGTGCCTCACTGGCAACCCCGACCGGACGAAACGCCGGATGAACACTTTGATCGGGTTTACCTGCTTTCGAAGAGC
TGGAGCGGGGAGATGCCTTC

Downstream 100 bases:

>100_bases
GGAGATTTCGCCATGACGTCATTGGAAAAGGATCTGCAATCACCAGCGCTGACTGCCCTGAAAACCAGACTCACGCGGCG
TGTTGCAACTTTGGGCTGCT

Product: putative lipoprotein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 257; Mature: 257

Protein sequence:

>257_residues
MKIQLKSIVLISAFAALGGCQGKPPNTFKFTADLPPGFAYVAAVYYAPEKGKTCTLERRDNLAPVFNSKWRTDYKPDAEI
TIRKIVKGCPLVVRRIELEINSAYGKDWSDFSRDEAMVFIRDDLEEQFKGVFNEAGESTFHGQCEWWFRTSGKPRILRKI
LDCRTVDAQGARAYGKTFGAFNPDQLPGKTVRMKITLAADERPAIKDTWVKVTNGWKRCMGDNFEDQYAFCYGNYTDFST
FTMPDGQVCTIYPGCTE

Sequences:

>Translated_257_residues
MKIQLKSIVLISAFAALGGCQGKPPNTFKFTADLPPGFAYVAAVYYAPEKGKTCTLERRDNLAPVFNSKWRTDYKPDAEI
TIRKIVKGCPLVVRRIELEINSAYGKDWSDFSRDEAMVFIRDDLEEQFKGVFNEAGESTFHGQCEWWFRTSGKPRILRKI
LDCRTVDAQGARAYGKTFGAFNPDQLPGKTVRMKITLAADERPAIKDTWVKVTNGWKRCMGDNFEDQYAFCYGNYTDFST
FTMPDGQVCTIYPGCTE
>Mature_257_residues
MKIQLKSIVLISAFAALGGCQGKPPNTFKFTADLPPGFAYVAAVYYAPEKGKTCTLERRDNLAPVFNSKWRTDYKPDAEI
TIRKIVKGCPLVVRRIELEINSAYGKDWSDFSRDEAMVFIRDDLEEQFKGVFNEAGESTFHGQCEWWFRTSGKPRILRKI
LDCRTVDAQGARAYGKTFGAFNPDQLPGKTVRMKITLAADERPAIKDTWVKVTNGWKRCMGDNFEDQYAFCYGNYTDFST
FTMPDGQVCTIYPGCTE

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 29125; Mature: 29125

Theoretical pI: Translated: 8.30; Mature: 8.30

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.5 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
5.4 %Cys+Met (Translated Protein)
3.5 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
5.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKIQLKSIVLISAFAALGGCQGKPPNTFKFTADLPPGFAYVAAVYYAPEKGKTCTLERRD
CEEEHHHHHHHHHHHHHCCCCCCCCCCEEEEECCCCCCEEEEEEEECCCCCCEEEEECCC
NLAPVFNSKWRTDYKPDAEITIRKIVKGCPLVVRRIELEINSAYGKDWSDFSRDEAMVFI
CCCCCCCCCCCCCCCCCCHHHHHHHHCCCCEEEEEEEEEEECCCCCCCCCCCCCCEEEEE
RDDLEEQFKGVFNEAGESTFHGQCEWWFRTSGKPRILRKILDCRTVDAQGARAYGKTFGA
ECCHHHHHHHHHHHCCCCCCCCEEEEEEECCCCHHHHHHHHHHCCCCCCCCHHHHHHCCC
FNPDQLPGKTVRMKITLAADERPAIKDTWVKVTNGWKRCMGDNFEDQYAFCYGNYTDFST
CCCCCCCCCEEEEEEEEECCCCCCCHHHEEEECCCHHHHHCCCCCCCEEEEECCCCCCEE
FTMPDGQVCTIYPGCTE
EECCCCCEEEECCCCCC
>Mature Secondary Structure
MKIQLKSIVLISAFAALGGCQGKPPNTFKFTADLPPGFAYVAAVYYAPEKGKTCTLERRD
CEEEHHHHHHHHHHHHHCCCCCCCCCCEEEEECCCCCCEEEEEEEECCCCCCEEEEECCC
NLAPVFNSKWRTDYKPDAEITIRKIVKGCPLVVRRIELEINSAYGKDWSDFSRDEAMVFI
CCCCCCCCCCCCCCCCCCHHHHHHHHCCCCEEEEEEEEEEECCCCCCCCCCCCCCEEEEE
RDDLEEQFKGVFNEAGESTFHGQCEWWFRTSGKPRILRKILDCRTVDAQGARAYGKTFGA
ECCHHHHHHHHHHHCCCCCCCCEEEEEEECCCCHHHHHHHHHHCCCCCCCCHHHHHHCCC
FNPDQLPGKTVRMKITLAADERPAIKDTWVKVTNGWKRCMGDNFEDQYAFCYGNYTDFST
CCCCCCCCCEEEEEEEEECCCCCCCHHHEEEECCCHHHHHCCCCCCCEEEEECCCCCCEE
FTMPDGQVCTIYPGCTE
EECCCCCEEEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA