Definition Pseudomonas fluorescens Pf0-1 chromosome, complete genome.
Accession NC_007492
Length 6,438,405

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The map label for this gene is 77456377

Identifier: 77456377

GI number: 77456377

Start: 179814

End: 181997

Strand: Reverse

Name: 77456377

Synonym: Pfl01_0149

Alternate gene names: NA

Gene position: 181997-179814 (Counterclockwise)

Preceding gene: 77456378

Following gene: 77456361

Centisome position: 2.83

GC content: 58.79

Gene sequence:

>2184_bases
ATGACTTCATTTGAAAAGGATCTGCAATCTCCGTTGGGCAGTCGCATGCTGACATGTCCTGCAGGTGGAAAATGGACAAG
TTTCCAACTCATCGACGAGTTCTGTTCGGGTGAACCCTACGCCGGGTTGGCTTACATCGTTACCGACTCGGAAGGCCATA
AGTACACAGGCCGCTTGGACGAAGCAGGCAAGGGCAAAGTGAATAATCACTTTGCGGGACCAGTAACGCTGCTGTTTGAT
CAAGCATACGAAGGCAAGGAAAAGCTTTACTCATATTTGCAAGGCAGACCACATTACCCTCTGAAAATCACCGAGCTTCA
GGTTCGCGCCGAAGCAACCCATTACCTGAACCCTAATGCCACTCGTACGCGGGAACGCCCCGAAATCGCAGACGGTGGGG
ATTACTTTCAAGTCGAAGTCCGTCACCTGGTCAGACATGCCTCCCACCTTCCACCGGAGGTTTATCGCGATTATCCCCTC
GATTCCGGGTGCGCAGCCATCATGCGCGAACACGGCAAACTCGGGGTCGCCCTGATGCCGCAACGTCACACCATTCTGGA
AGTGCGACCGTTACGTGCGTTGCGTCCGATATTATCCACAGCTCCGGCATTCTGTGCACTCAACCTGTACCAGCTCGCAT
TGATGGCAACCCTGAGTTACTGCCCTTTCGGCCAGAAACCCAAAGTCCCTTGCGCCGAAACCAGATCCGTTAAGTTTCTG
CTGCAACCCAGCGTCGGCAATTGGTTCGGCGATGCACTGCCCAAGGGGGAAGAACTGTGGAAAGTCGACAGCGCCCAGAC
CAAAGCCTATTACCCGCTCTACGAAGATGTTCCGTATTCCGCAAGGTTGGAAATCATCCCGTTTGACCCGAACCTCTATG
CAGTCAACAGACATACGCCAGAACGTGATCCTGAACACCCGGCCAGCGTTCACTTTCTCGACGACATCGGTAGTAAAGAC
AGTACAGACACCCAAGCTTTCATCACCCACAACGACGAGCTGATCCTGATCGCCGTTCGCGGTACCGCCGAGATCGTCGC
CGATGGGTTACGCGATGCCGATGCCTTGCAGGTGCCGTTTGCGGAAGGCGAAGGCCAGGTACATCGAGGTTTCTATGAAG
CGGCCAAAAAAGCTGCCGCATTCGCCGTCAATTACCTGGAAAAGTTCTACACCGGCCAAACACTCCTGATCTGCGGCCAC
AGCCTCGGTGGCGCAATCACGCTGCTGCTGGCCGAAATGCTCCGCCGTAGGCCAGAGGGCTACAAAATCCAGCTCTACAC
CTACGGCGCCCCCCGCGCCGGCGACGCGGATTTCGTCAAGGGCGCAGCCGATCTCGTGCATCACCGCATGGTCAACCACA
ACGACCCGGTGCCCAGCGTGCCCGGCAGCTGGATGAACACCAAGGCCGATATCTACGGCACCGGGGCAGCGCTGACCTTC
GTGAATGTGCCGCTCGGTCTATCGGTGTTCGTCGCGGGCATCACCAACTGGACCGGGGAAGCCTACGACCACCACGGCCG
TTTGCGCCACGCCATGCCGGTGGAGTTCGGCCGCCAGCAGGTGTCGTCAATCCTCTGGGAGCCGGGCTGCGACACCATCA
CCCAGCACGCAGCCTGTGACGTGGCGATCCGGCAGCGGCACGGCCTGCCGGATCGGCCGACGTTGCTCAAGCAGATCTTC
GACGCCGGGCACCATTCGATGACCGGGGCTTACATCCCGGCGTGCTGGGCGGTGTTGCGGCGTTGGCAGGAGGCACAGGA
GTCAAACCGCACGCTGGTTACCGAGCGAGAATTCGCATTGGTTGAGTCGGCCCTGCAGCGCATCACCGATCAGTTGCGCC
GCCAGCGCAGCAATTTGCCGGGACGGCCGGACAGCTATGTGCGCAGCCGGAAAAACATCGTCGAAGCGCTCAATCATGAA
ATCGAGAACATCCGCACGACCCGCGAACGGCTGGCCAGTCTGCGGCACCGGCGCCTGACGACCACGGATGTTTATGGATC
GCTGGCAGAACAACCGGAACGTCTGGCCGAAAGCCTGCCGCGCTGGCGGCTGCATCCGGAAAACCTCGCAACGGAACAAC
TGGCCATGGCACCGGAAGCCGCTGAGGATGACCCGCTGCTGGTAACGCTCTACGGTCACAGAATCGGCGCGCCCCACACT
TTCGACATTGACTCGATCATCTGA

Upstream 100 bases:

>100_bases
CTTCTGTTACGGCAACTACACCGACTTCAGCACTTTCACCATGCCGGATGGCCAAGTCTGCACCATTTATCCAGGTTGCA
CGGAATAAGGAGATTTCGCC

Downstream 100 bases:

>100_bases
CTCAAGCCTGTGGATACCACACCAGCCGCTCCGCCGCCGGGTTGCGCTCCTCCACCGCAAAACCCAGCGCCAGGTAGTGC
TGGCGCGCATGGGGGTTATT

Product: lipase, class 3

Products: NA

Alternate protein names: Lipase Family Protein; Pdl Protein; Lipase Protein

Number of amino acids: Translated: 727; Mature: 726

Protein sequence:

>727_residues
MTSFEKDLQSPLGSRMLTCPAGGKWTSFQLIDEFCSGEPYAGLAYIVTDSEGHKYTGRLDEAGKGKVNNHFAGPVTLLFD
QAYEGKEKLYSYLQGRPHYPLKITELQVRAEATHYLNPNATRTRERPEIADGGDYFQVEVRHLVRHASHLPPEVYRDYPL
DSGCAAIMREHGKLGVALMPQRHTILEVRPLRALRPILSTAPAFCALNLYQLALMATLSYCPFGQKPKVPCAETRSVKFL
LQPSVGNWFGDALPKGEELWKVDSAQTKAYYPLYEDVPYSARLEIIPFDPNLYAVNRHTPERDPEHPASVHFLDDIGSKD
STDTQAFITHNDELILIAVRGTAEIVADGLRDADALQVPFAEGEGQVHRGFYEAAKKAAAFAVNYLEKFYTGQTLLICGH
SLGGAITLLLAEMLRRRPEGYKIQLYTYGAPRAGDADFVKGAADLVHHRMVNHNDPVPSVPGSWMNTKADIYGTGAALTF
VNVPLGLSVFVAGITNWTGEAYDHHGRLRHAMPVEFGRQQVSSILWEPGCDTITQHAACDVAIRQRHGLPDRPTLLKQIF
DAGHHSMTGAYIPACWAVLRRWQEAQESNRTLVTEREFALVESALQRITDQLRRQRSNLPGRPDSYVRSRKNIVEALNHE
IENIRTTRERLASLRHRRLTTTDVYGSLAEQPERLAESLPRWRLHPENLATEQLAMAPEAAEDDPLLVTLYGHRIGAPHT
FDIDSII

Sequences:

>Translated_727_residues
MTSFEKDLQSPLGSRMLTCPAGGKWTSFQLIDEFCSGEPYAGLAYIVTDSEGHKYTGRLDEAGKGKVNNHFAGPVTLLFD
QAYEGKEKLYSYLQGRPHYPLKITELQVRAEATHYLNPNATRTRERPEIADGGDYFQVEVRHLVRHASHLPPEVYRDYPL
DSGCAAIMREHGKLGVALMPQRHTILEVRPLRALRPILSTAPAFCALNLYQLALMATLSYCPFGQKPKVPCAETRSVKFL
LQPSVGNWFGDALPKGEELWKVDSAQTKAYYPLYEDVPYSARLEIIPFDPNLYAVNRHTPERDPEHPASVHFLDDIGSKD
STDTQAFITHNDELILIAVRGTAEIVADGLRDADALQVPFAEGEGQVHRGFYEAAKKAAAFAVNYLEKFYTGQTLLICGH
SLGGAITLLLAEMLRRRPEGYKIQLYTYGAPRAGDADFVKGAADLVHHRMVNHNDPVPSVPGSWMNTKADIYGTGAALTF
VNVPLGLSVFVAGITNWTGEAYDHHGRLRHAMPVEFGRQQVSSILWEPGCDTITQHAACDVAIRQRHGLPDRPTLLKQIF
DAGHHSMTGAYIPACWAVLRRWQEAQESNRTLVTEREFALVESALQRITDQLRRQRSNLPGRPDSYVRSRKNIVEALNHE
IENIRTTRERLASLRHRRLTTTDVYGSLAEQPERLAESLPRWRLHPENLATEQLAMAPEAAEDDPLLVTLYGHRIGAPHT
FDIDSII
>Mature_726_residues
TSFEKDLQSPLGSRMLTCPAGGKWTSFQLIDEFCSGEPYAGLAYIVTDSEGHKYTGRLDEAGKGKVNNHFAGPVTLLFDQ
AYEGKEKLYSYLQGRPHYPLKITELQVRAEATHYLNPNATRTRERPEIADGGDYFQVEVRHLVRHASHLPPEVYRDYPLD
SGCAAIMREHGKLGVALMPQRHTILEVRPLRALRPILSTAPAFCALNLYQLALMATLSYCPFGQKPKVPCAETRSVKFLL
QPSVGNWFGDALPKGEELWKVDSAQTKAYYPLYEDVPYSARLEIIPFDPNLYAVNRHTPERDPEHPASVHFLDDIGSKDS
TDTQAFITHNDELILIAVRGTAEIVADGLRDADALQVPFAEGEGQVHRGFYEAAKKAAAFAVNYLEKFYTGQTLLICGHS
LGGAITLLLAEMLRRRPEGYKIQLYTYGAPRAGDADFVKGAADLVHHRMVNHNDPVPSVPGSWMNTKADIYGTGAALTFV
NVPLGLSVFVAGITNWTGEAYDHHGRLRHAMPVEFGRQQVSSILWEPGCDTITQHAACDVAIRQRHGLPDRPTLLKQIFD
AGHHSMTGAYIPACWAVLRRWQEAQESNRTLVTEREFALVESALQRITDQLRRQRSNLPGRPDSYVRSRKNIVEALNHEI
ENIRTTRERLASLRHRRLTTTDVYGSLAEQPERLAESLPRWRLHPENLATEQLAMAPEAAEDDPLLVTLYGHRIGAPHTF
DIDSII

Specific function: Unknown

COG id: COG3675

COG function: function code I; Predicted lipase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 81378; Mature: 81247

Theoretical pI: Translated: 6.80; Mature: 6.80

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTSFEKDLQSPLGSRMLTCPAGGKWTSFQLIDEFCSGEPYAGLAYIVTDSEGHKYTGRLD
CCCHHHHHHCHHCCCEEECCCCCCCCHHHHHHHHHCCCCCCCEEEEEECCCCCEEECCCC
EAGKGKVNNHFAGPVTLLFDQAYEGKEKLYSYLQGRPHYPLKITELQVRAEATHYLNPNA
CCCCCCCCCCCCCCCEEEEHHHCCCHHHHHHHHCCCCCCCEEEEEEEEEECHHHCCCCCC
TRTRERPEIADGGDYFQVEVRHLVRHASHLPPEVYRDYPLDSGCAAIMREHGKLGVALMP
CCCCCCCCCCCCCCEEEHHHHHHHHHHHCCCHHHHHCCCCCCHHHHHHHHCCCCCEEECC
QRHTILEVRPLRALRPILSTAPAFCALNLYQLALMATLSYCPFGQKPKVPCAETRSVKFL
CCCCEEEECHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEE
LQPSVGNWFGDALPKGEELWKVDSAQTKAYYPLYEDVPYSARLEIIPFDPNLYAVNRHTP
ECCCCCCHHHHCCCCCCHHEECCCCCCCEECCHHHCCCCCCEEEEEECCCCEEEEECCCC
ERDPEHPASVHFLDDIGSKDSTDTQAFITHNDELILIAVRGTAEIVADGLRDADALQVPF
CCCCCCCCCEEEHHHCCCCCCCCCEEEEEECCCEEEEEECCCHHHHHHCCCCCCCEECCC
AEGEGQVHRGFYEAAKKAAAFAVNYLEKFYTGQTLLICGHSLGGAITLLLAEMLRRRPEG
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCHHHHHHHHHHHHHHHCCCC
YKIQLYTYGAPRAGDADFVKGAADLVHHRMVNHNDPVPSVPGSWMNTKADIYGTGAALTF
CEEEEEECCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEECCEEEEE
VNVPLGLSVFVAGITNWTGEAYDHHGRLRHAMPVEFGRQQVSSILWEPGCDTITQHAACD
EECCCCHHHHHHHHCCCCCCHHHHCCCCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHH
VAIRQRHGLPDRPTLLKQIFDAGHHSMTGAYIPACWAVLRRWQEAQESNRTLVTEREFAL
HHHHHHCCCCCCHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHCCCEEEEHHHHHH
VESALQRITDQLRRQRSNLPGRPDSYVRSRKNIVEALNHEIENIRTTRERLASLRHRRLT
HHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
TTDVYGSLAEQPERLAESLPRWRLHPENLATEQLAMAPEAAEDDPLLVTLYGHRIGAPHT
HHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCCCCCCCEEEEEECCCCCCCCC
FDIDSII
CCHHHCC
>Mature Secondary Structure 
TSFEKDLQSPLGSRMLTCPAGGKWTSFQLIDEFCSGEPYAGLAYIVTDSEGHKYTGRLD
CCHHHHHHCHHCCCEEECCCCCCCCHHHHHHHHHCCCCCCCEEEEEECCCCCEEECCCC
EAGKGKVNNHFAGPVTLLFDQAYEGKEKLYSYLQGRPHYPLKITELQVRAEATHYLNPNA
CCCCCCCCCCCCCCCEEEEHHHCCCHHHHHHHHCCCCCCCEEEEEEEEEECHHHCCCCCC
TRTRERPEIADGGDYFQVEVRHLVRHASHLPPEVYRDYPLDSGCAAIMREHGKLGVALMP
CCCCCCCCCCCCCCEEEHHHHHHHHHHHCCCHHHHHCCCCCCHHHHHHHHCCCCCEEECC
QRHTILEVRPLRALRPILSTAPAFCALNLYQLALMATLSYCPFGQKPKVPCAETRSVKFL
CCCCEEEECHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEE
LQPSVGNWFGDALPKGEELWKVDSAQTKAYYPLYEDVPYSARLEIIPFDPNLYAVNRHTP
ECCCCCCHHHHCCCCCCHHEECCCCCCCEECCHHHCCCCCCEEEEEECCCCEEEEECCCC
ERDPEHPASVHFLDDIGSKDSTDTQAFITHNDELILIAVRGTAEIVADGLRDADALQVPF
CCCCCCCCCEEEHHHCCCCCCCCCEEEEEECCCEEEEEECCCHHHHHHCCCCCCCEECCC
AEGEGQVHRGFYEAAKKAAAFAVNYLEKFYTGQTLLICGHSLGGAITLLLAEMLRRRPEG
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCHHHHHHHHHHHHHHHCCCC
YKIQLYTYGAPRAGDADFVKGAADLVHHRMVNHNDPVPSVPGSWMNTKADIYGTGAALTF
CEEEEEECCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEECCEEEEE
VNVPLGLSVFVAGITNWTGEAYDHHGRLRHAMPVEFGRQQVSSILWEPGCDTITQHAACD
EECCCCHHHHHHHHCCCCCCHHHHCCCCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHH
VAIRQRHGLPDRPTLLKQIFDAGHHSMTGAYIPACWAVLRRWQEAQESNRTLVTEREFAL
HHHHHHCCCCCCHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHCCCEEEEHHHHHH
VESALQRITDQLRRQRSNLPGRPDSYVRSRKNIVEALNHEIENIRTTRERLASLRHRRLT
HHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
TTDVYGSLAEQPERLAESLPRWRLHPENLATEQLAMAPEAAEDDPLLVTLYGHRIGAPHT
HHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCCCCCCCEEEEEECCCCCCCCC
FDIDSII
CCHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA