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The map label for this gene is tsr [C]

Identifier: 77456352

GI number: 77456352

Start: 132635

End: 134515

Strand: Direct

Name: tsr [C]

Synonym: Pfl01_0124

Alternate gene names: 77456352

Gene position: 132635-134515 (Clockwise)

Preceding gene: 77456346

Following gene: 77456358

Centisome position: 2.06

GC content: 60.71

Gene sequence:

>1881_bases
ATGAATCTCAAGTTCAGCCATAAAATCCTGCTGGCCGCCTCGGGCGTTGTGGTCCTGGCGTTCGCGCTGTTCACTTTGTA
CAACGACTATCTGCAGCGAAATACGATTCGCCAGAACCTCCAGTCCTCGGTCCAGCAGGCCGGTGACCTGACCGCCAGCA
GTGTGCAGAACTGGATGAGCGGACGGATTCTGGTGCTGGAAAACCTCGCGCAGAACGTCGCTCATCAAGGCAAGAACGCC
GACTTCCCGGGCCTGGTCGATCAACCGGCCTTCACCTCGAACTTCCAGTTCACCTACGTCGGCCAGGCCAACGGTGTGTT
CACCCAGCGCCCTGACGCGAAGATGCCGGACGGCTACGACCCGCGTCAGCGCCCGTGGTACAAGCAGGCCGTGGCCGCTG
ACCAGACCATGCTGACCCCGCCATACATGGCTGCCGTTGGCGGGCTGGTGGTGACCATCGCCATGCCGGTGAAAAAGAAC
GGCGAACTGCTCGGCGTAGTGGGCGGTGACCTGAGCCTGGAAACCCTGGTAAAGATCATCAACTCGGTGGACTTCGGTGG
CCTGGGCCACGCGTTCCTGGTCAGCGGTGACGGTCAGGTAATCGTCAGCCCGGACAAAGACCAGGTGATGAAGAACCTCA
AAGACATCTACCCGAACGCCGGTGTGCGCATCGAGAAGGGCAATCAAAACGTGGTGCTCAACGGCCAGGAACGCATCCTG
TCGTTCACCCCGGTTGCCGGTCTGCCGAATGCCGAGTGGTACATCGGTCTGTCGATCGACCGCGACAAGGCCTACGCCGC
ACTCAGCCAGTTCCGTACCTCTGCAGTGATTGCGATGTTCGTTGCGGTGGGCGCGATTGCAGTGTTCCTGAGCCTGCTGA
TCACCGTGCTGATGCGTCCGCTGATCACCATGGGCCGCGCGATGCAGGACATCGCCCAGGGTGAAGGTGACCTGACCCGT
CGTCTGGTAGTGGAAAGCAAGGACGAGTTCGGCGAGTTGGGCAGTTCGTTCAACCAGTTCGTGGAGCGGATTCACGCTTC
GATCTCCGAAGTGTCTTCCGCGACTCGCCACGTACACGATCTGTCCCAACGGGTGATGGCATCGTCCAACGCTTCGATCA
TCGGCTCCGACGAGCAAAGCGCGCGCACCAACAGTGTCGCTGCGGCGATCAATCAGTTGGGTGCCGCCACCCAGGAAATC
GCCCGCAACGCCGCCGACGCTTCGCAACACGCCAGTGGCGCGAGCGAGCAGGCCGATGACGGTCGTCAGGTGGTCGAGCA
GACGATTCAGGCCATGACCGAGCTGTCGCAGAAGATCAGCCTGTCGTGCACCCAGATCGAAACCCTGAATGCCAGCACCG
ACAACATCGGCCACATTCTCGACGTGATCAAAGGCATCTCCCAACAGACCAACCTGCTGGCGCTCAACGCAGCCATCGAA
GCGGCCCGTGCCGGTGAAGCCGGACGCGGTTTTGCGGTGGTGGCGGACGAGGTGCGTAACCTCGCTCACCGCACTCAGGA
ATCGGCGGAAGAAATCCACAAGATGATCACTTCGCTGCAGGTCGGCTCCCGCGAAGCGGTGACCACCATGAACGCCAGTC
AGGCGTCCAGCGAGGAAACCGTTGAAGTGGCGAACCAGGCCGGTCTGCGTCTGGTCAGCGTGACCCAGCGCATCGGCGAA
ATCGATGGCATGAACCAGTCGGTGGCCGCCGCTACCGAGGAACAGACTGCCGTGGTGGAAACCCTCAACGTCGACGTCAA
CCAGATCAACCTGCTGAACCAGCAGAGCGTGGCCAACCTCAATGAAACGTTGAAGGATTGCGATGCGTTGTCGCAGCAGG
CCAACCGTTTGAAACAGCTGGTCGACAGCTTCAAGATCTGA

Upstream 100 bases:

>100_bases
GTGCACCAAAGTAGAGCAGCCGTCAGAACGCTGCCTGCGCTGTACATGGAATGTTGCATCCGGAACGCATCCCCACTTTT
CGCATAAGAAGTCCCATGAA

Downstream 100 bases:

>100_bases
TCGCTTGCGGTAAAAAACAGCCCGCTGCGGAGTGATCCGCAGCGGGCTTTTTCATGCCTTACACAAACAGCTTCAGCACA
TTGCCCATCGCGTCATCGGC

Product: Cache sensor-containing chemotaxis sensory transducer

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 626; Mature: 626

Protein sequence:

>626_residues
MNLKFSHKILLAASGVVVLAFALFTLYNDYLQRNTIRQNLQSSVQQAGDLTASSVQNWMSGRILVLENLAQNVAHQGKNA
DFPGLVDQPAFTSNFQFTYVGQANGVFTQRPDAKMPDGYDPRQRPWYKQAVAADQTMLTPPYMAAVGGLVVTIAMPVKKN
GELLGVVGGDLSLETLVKIINSVDFGGLGHAFLVSGDGQVIVSPDKDQVMKNLKDIYPNAGVRIEKGNQNVVLNGQERIL
SFTPVAGLPNAEWYIGLSIDRDKAYAALSQFRTSAVIAMFVAVGAIAVFLSLLITVLMRPLITMGRAMQDIAQGEGDLTR
RLVVESKDEFGELGSSFNQFVERIHASISEVSSATRHVHDLSQRVMASSNASIIGSDEQSARTNSVAAAINQLGAATQEI
ARNAADASQHASGASEQADDGRQVVEQTIQAMTELSQKISLSCTQIETLNASTDNIGHILDVIKGISQQTNLLALNAAIE
AARAGEAGRGFAVVADEVRNLAHRTQESAEEIHKMITSLQVGSREAVTTMNASQASSEETVEVANQAGLRLVSVTQRIGE
IDGMNQSVAAATEEQTAVVETLNVDVNQINLLNQQSVANLNETLKDCDALSQQANRLKQLVDSFKI

Sequences:

>Translated_626_residues
MNLKFSHKILLAASGVVVLAFALFTLYNDYLQRNTIRQNLQSSVQQAGDLTASSVQNWMSGRILVLENLAQNVAHQGKNA
DFPGLVDQPAFTSNFQFTYVGQANGVFTQRPDAKMPDGYDPRQRPWYKQAVAADQTMLTPPYMAAVGGLVVTIAMPVKKN
GELLGVVGGDLSLETLVKIINSVDFGGLGHAFLVSGDGQVIVSPDKDQVMKNLKDIYPNAGVRIEKGNQNVVLNGQERIL
SFTPVAGLPNAEWYIGLSIDRDKAYAALSQFRTSAVIAMFVAVGAIAVFLSLLITVLMRPLITMGRAMQDIAQGEGDLTR
RLVVESKDEFGELGSSFNQFVERIHASISEVSSATRHVHDLSQRVMASSNASIIGSDEQSARTNSVAAAINQLGAATQEI
ARNAADASQHASGASEQADDGRQVVEQTIQAMTELSQKISLSCTQIETLNASTDNIGHILDVIKGISQQTNLLALNAAIE
AARAGEAGRGFAVVADEVRNLAHRTQESAEEIHKMITSLQVGSREAVTTMNASQASSEETVEVANQAGLRLVSVTQRIGE
IDGMNQSVAAATEEQTAVVETLNVDVNQINLLNQQSVANLNETLKDCDALSQQANRLKQLVDSFKI
>Mature_626_residues
MNLKFSHKILLAASGVVVLAFALFTLYNDYLQRNTIRQNLQSSVQQAGDLTASSVQNWMSGRILVLENLAQNVAHQGKNA
DFPGLVDQPAFTSNFQFTYVGQANGVFTQRPDAKMPDGYDPRQRPWYKQAVAADQTMLTPPYMAAVGGLVVTIAMPVKKN
GELLGVVGGDLSLETLVKIINSVDFGGLGHAFLVSGDGQVIVSPDKDQVMKNLKDIYPNAGVRIEKGNQNVVLNGQERIL
SFTPVAGLPNAEWYIGLSIDRDKAYAALSQFRTSAVIAMFVAVGAIAVFLSLLITVLMRPLITMGRAMQDIAQGEGDLTR
RLVVESKDEFGELGSSFNQFVERIHASISEVSSATRHVHDLSQRVMASSNASIIGSDEQSARTNSVAAAINQLGAATQEI
ARNAADASQHASGASEQADDGRQVVEQTIQAMTELSQKISLSCTQIETLNASTDNIGHILDVIKGISQQTNLLALNAAIE
AARAGEAGRGFAVVADEVRNLAHRTQESAEEIHKMITSLQVGSREAVTTMNASQASSEETVEVANQAGLRLVSVTQRIGE
IDGMNQSVAAATEEQTAVVETLNVDVNQINLLNQQSVANLNETLKDCDALSQQANRLKQLVDSFKI

Specific function: Chemotactic-signal transducers respond to changes in the concentration of attractants and repellents in the environment, transduce a signal from the outside to the inside of the cell, and facilitate sensory adaptation through the variation of the level of

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 methyl-accepting transducer domain [H]

Homologues:

Organism=Escherichia coli, GI2367378, Length=429, Percent_Identity=30.7692307692308, Blast_Score=140, Evalue=2e-34,
Organism=Escherichia coli, GI1787690, Length=359, Percent_Identity=30.3621169916435, Blast_Score=129, Evalue=4e-31,
Organism=Escherichia coli, GI1788195, Length=332, Percent_Identity=31.9277108433735, Blast_Score=128, Evalue=1e-30,
Organism=Escherichia coli, GI1788194, Length=369, Percent_Identity=30.0813008130081, Blast_Score=127, Evalue=2e-30,
Organism=Escherichia coli, GI1789453, Length=368, Percent_Identity=28.5326086956522, Blast_Score=99, Evalue=1e-21,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004010
- InterPro:   IPR003122
- InterPro:   IPR004089
- InterPro:   IPR003660
- InterPro:   IPR022094 [H]

Pfam domain/function: PF02743 Cache_1; PF00672 HAMP; PF12332 McpA_N; PF00015 MCPsignal; PF02203 TarH [H]

EC number: NA

Molecular weight: Translated: 67265; Mature: 67265

Theoretical pI: Translated: 4.91; Mature: 4.91

Prosite motif: PS50885 HAMP ; PS50111 CHEMOTAXIS_TRANSDUC_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNLKFSHKILLAASGVVVLAFALFTLYNDYLQRNTIRQNLQSSVQQAGDLTASSVQNWMS
CCCCCCCCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHC
GRILVLENLAQNVAHQGKNADFPGLVDQPAFTSNFQFTYVGQANGVFTQRPDAKMPDGYD
CCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCEECCCCCCCCCCCC
PRQRPWYKQAVAADQTMLTPPYMAAVGGLVVTIAMPVKKNGELLGVVGGDLSLETLVKII
CCCCCHHHHHHHCCCCCCCCHHHHHHHHHHEEEEECCCCCCCEEEEECCCCCHHHHHHHH
NSVDFGGLGHAFLVSGDGQVIVSPDKDQVMKNLKDIYPNAGVRIEKGNQNVVLNGQERIL
HCCCCCCCCCEEEEECCCEEEECCCHHHHHHHHHHHCCCCCEEEECCCCEEEECCHHHEE
SFTPVAGLPNAEWYIGLSIDRDKAYAALSQFRTSAVIAMFVAVGAIAVFLSLLITVLMRP
EECCCCCCCCCCEEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LITMGRAMQDIAQGEGDLTRRLVVESKDEFGELGSSFNQFVERIHASISEVSSATRHVHD
HHHHHHHHHHHHCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LSQRVMASSNASIIGSDEQSARTNSVAAAINQLGAATQEIARNAADASQHASGASEQADD
HHHHHHHCCCCCEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCH
GRQVVEQTIQAMTELSQKISLSCTQIETLNASTDNIGHILDVIKGISQQTNLLALNAAIE
HHHHHHHHHHHHHHHHHHHCCCHHHEEECCCCCCHHHHHHHHHHCCCCCCCEEEHHHHHH
AARAGEAGRGFAVVADEVRNLAHRTQESAEEIHKMITSLQVGSREAVTTMNASQASSEET
HHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHEECCCHHCCCHHH
VEVANQAGLRLVSVTQRIGEIDGMNQSVAAATEEQTAVVETLNVDVNQINLLNQQSVANL
HHHHHHCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHCHHHHHHH
NETLKDCDALSQQANRLKQLVDSFKI
HHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MNLKFSHKILLAASGVVVLAFALFTLYNDYLQRNTIRQNLQSSVQQAGDLTASSVQNWMS
CCCCCCCCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHC
GRILVLENLAQNVAHQGKNADFPGLVDQPAFTSNFQFTYVGQANGVFTQRPDAKMPDGYD
CCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCEECCCCCCCCCCCC
PRQRPWYKQAVAADQTMLTPPYMAAVGGLVVTIAMPVKKNGELLGVVGGDLSLETLVKII
CCCCCHHHHHHHCCCCCCCCHHHHHHHHHHEEEEECCCCCCCEEEEECCCCCHHHHHHHH
NSVDFGGLGHAFLVSGDGQVIVSPDKDQVMKNLKDIYPNAGVRIEKGNQNVVLNGQERIL
HCCCCCCCCCEEEEECCCEEEECCCHHHHHHHHHHHCCCCCEEEECCCCEEEECCHHHEE
SFTPVAGLPNAEWYIGLSIDRDKAYAALSQFRTSAVIAMFVAVGAIAVFLSLLITVLMRP
EECCCCCCCCCCEEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LITMGRAMQDIAQGEGDLTRRLVVESKDEFGELGSSFNQFVERIHASISEVSSATRHVHD
HHHHHHHHHHHHCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LSQRVMASSNASIIGSDEQSARTNSVAAAINQLGAATQEIARNAADASQHASGASEQADD
HHHHHHHCCCCCEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCH
GRQVVEQTIQAMTELSQKISLSCTQIETLNASTDNIGHILDVIKGISQQTNLLALNAAIE
HHHHHHHHHHHHHHHHHHHCCCHHHEEECCCCCCHHHHHHHHHHCCCCCCCEEEHHHHHH
AARAGEAGRGFAVVADEVRNLAHRTQESAEEIHKMITSLQVGSREAVTTMNASQASSEET
HHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHEECCCHHCCCHHH
VEVANQAGLRLVSVTQRIGEIDGMNQSVAAATEEQTAVVETLNVDVNQINLLNQQSVANL
HHHHHHCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHCHHHHHHH
NETLKDCDALSQQANRLKQLVDSFKI
HHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: NA