| Definition | Pseudomonas fluorescens Pf0-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007492 |
| Length | 6,438,405 |
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The map label for this gene is 77456358
Identifier: 77456358
GI number: 77456358
Start: 141764
End: 142519
Strand: Direct
Name: 77456358
Synonym: Pfl01_0130
Alternate gene names: NA
Gene position: 141764-142519 (Clockwise)
Preceding gene: 77456352
Following gene: 77456359
Centisome position: 2.2
GC content: 58.2
Gene sequence:
>756_bases TTGTTTTTTGCTGGGCTAACCTTCACCATCAAGCGCTTTCTTCTCTGCCCTGGATGCCTTGCATTGGCGGTACGTTTCGC AATCCCACGGATTGCGCGCTGGCTTGCCTGCGCGCTGCTGCTGGCCGGCATCATGCTGGGCGGCCTGCATGCCGATTGGG ATTTTTCCGCGATCAGCCGCAAGGCCACGGCACTGTACGGGCCGTTGGGTGCCGGGCAACAGCGGATCGATGCCTGGCAG AATCTGCTGGCCACACAGAAGCAGGTCAGCGAGATGGAAAAGCTCAAGGTGGTTAACCTGTTTTTCAACAAACAGATGCG CTACGTCGAAGACATCGATCTGTGGCACGAGGTCGATTATTGGGAAACCCCCATCGAAGCCTTGTGGAAAGGCGCCGGCG ACTGCGAAGACTACGCGATCGCCAAGTATTTCAGCCTGCGCCACCTCGGTGTGGCCAGTGACAAGTTGCGCATCACCTAC GTAAAGGCCCTGCGCCAGAACCGCGCGCACATGGTCCTGACTTACTATTCCAGCCCTGACGCCATGCCGCTGGTGCTCGA CAGCCTGATCGACCCGATCAAGCCGGCCGCCGAGCGAACCGATTTGCTGCCGGTCTACTCTTTCAATGCCGAAGGTTTGT ACCTGCCGGGAGCGAAGGGCAACAAGAAGGTCGGTGACACCAAACGCCTGTCACGCTGGCAGGATGTGTTGAAGAAAATG CAGGCCGAAGGATTTCCGGTCGAGACGACTAACTAG
Upstream 100 bases:
>100_bases TCCAAAGGACACTAGTGATTGCTCTACAGGTTGTCAAACCGTGTAGAAGAACCCTGTCACATCTGAAGTTTAGCGCGCCA GCGATGATCTCAGGGTGCCA
Downstream 100 bases:
>100_bases GAGCACGCGCTCAGATGTCTTTGTTCAAACAGCTGTTGATCGCTATCTGTCTGTTCCTGGTGGTCGCCTTCACCGGCAGC TTCATGGTCAGTCTGGAGAG
Product: hypothetical protein
Products: NA
Alternate protein names: Transglutaminase Family Protein Cysteine Peptidase BTLCP; Periplasmic Protein-Like Protein; Sulfate Adenylyltransferase Small Subunit; OmpA/MotB; Sulfate Adenylyltransferase; Lipoprotein; Transglutaminase Domain Protein
Number of amino acids: Translated: 251; Mature: 251
Protein sequence:
>251_residues MFFAGLTFTIKRFLLCPGCLALAVRFAIPRIARWLACALLLAGIMLGGLHADWDFSAISRKATALYGPLGAGQQRIDAWQ NLLATQKQVSEMEKLKVVNLFFNKQMRYVEDIDLWHEVDYWETPIEALWKGAGDCEDYAIAKYFSLRHLGVASDKLRITY VKALRQNRAHMVLTYYSSPDAMPLVLDSLIDPIKPAAERTDLLPVYSFNAEGLYLPGAKGNKKVGDTKRLSRWQDVLKKM QAEGFPVETTN
Sequences:
>Translated_251_residues MFFAGLTFTIKRFLLCPGCLALAVRFAIPRIARWLACALLLAGIMLGGLHADWDFSAISRKATALYGPLGAGQQRIDAWQ NLLATQKQVSEMEKLKVVNLFFNKQMRYVEDIDLWHEVDYWETPIEALWKGAGDCEDYAIAKYFSLRHLGVASDKLRITY VKALRQNRAHMVLTYYSSPDAMPLVLDSLIDPIKPAAERTDLLPVYSFNAEGLYLPGAKGNKKVGDTKRLSRWQDVLKKM QAEGFPVETTN >Mature_251_residues MFFAGLTFTIKRFLLCPGCLALAVRFAIPRIARWLACALLLAGIMLGGLHADWDFSAISRKATALYGPLGAGQQRIDAWQ NLLATQKQVSEMEKLKVVNLFFNKQMRYVEDIDLWHEVDYWETPIEALWKGAGDCEDYAIAKYFSLRHLGVASDKLRITY VKALRQNRAHMVLTYYSSPDAMPLVLDSLIDPIKPAAERTDLLPVYSFNAEGLYLPGAKGNKKVGDTKRLSRWQDVLKKM QAEGFPVETTN
Specific function: Unknown
COG id: COG3672
COG function: function code S; Predicted periplasmic protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 28350; Mature: 28350
Theoretical pI: Translated: 9.06; Mature: 9.06
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 4.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFFAGLTFTIKRFLLCPGCLALAVRFAIPRIARWLACALLLAGIMLGGLHADWDFSAISR CEECHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHH KATALYGPLGAGQQRIDAWQNLLATQKQVSEMEKLKVVNLFFNKQMRYVEDIDLWHEVDY HHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCH WETPIEALWKGAGDCEDYAIAKYFSLRHLGVASDKLRITYVKALRQNRAHMVLTYYSSPD HCCCHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCEEEEEEECCCC AMPLVLDSLIDPIKPAAERTDLLPVYSFNAEGLYLPGAKGNKKVGDTKRLSRWQDVLKKM CHHHHHHHHHHHCCCHHHHCCCCEEEEECCCEEECCCCCCCCCCCHHHHHHHHHHHHHHH QAEGFPVETTN HHCCCCCCCCC >Mature Secondary Structure MFFAGLTFTIKRFLLCPGCLALAVRFAIPRIARWLACALLLAGIMLGGLHADWDFSAISR CEECHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHH KATALYGPLGAGQQRIDAWQNLLATQKQVSEMEKLKVVNLFFNKQMRYVEDIDLWHEVDY HHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCH WETPIEALWKGAGDCEDYAIAKYFSLRHLGVASDKLRITYVKALRQNRAHMVLTYYSSPD HCCCHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCEEEEEEECCCC AMPLVLDSLIDPIKPAAERTDLLPVYSFNAEGLYLPGAKGNKKVGDTKRLSRWQDVLKKM CHHHHHHHHHHHCCCHHHHCCCCEEEEECCCEEECCCCCCCCCCCHHHHHHHHHHHHHHH QAEGFPVETTN HHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA