| Definition | Pseudomonas fluorescens Pf0-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007492 |
| Length | 6,438,405 |
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The map label for this gene is 77456257
Identifier: 77456257
GI number: 77456257
Start: 31846
End: 32172
Strand: Direct
Name: 77456257
Synonym: Pfl01_0029
Alternate gene names: NA
Gene position: 31846-32172 (Clockwise)
Preceding gene: 77456255
Following gene: 77456259
Centisome position: 0.49
GC content: 62.08
Gene sequence:
>327_bases ATGCAGACGATCAAGGGTTATCACGCCCACGTTTATTACGACGCCAGCACGATCAAACAGGCGCGGGCACTTTGTGAGCA GGCAGCAGCGCTGTTTCCATTGAAGATGGGCCGCGTGCACGAACGCCCGGTGGGCCCGCACCCGGACTGGAGCTGCCAGC TGGCCTTCGGCCCGGAGCTGATCGGCGACGTGCTGCCGTGGCTGGCGCTCAATCGCAAAGGGTTGGTGGTGTTCCTGCAC CCGGACACCGGCGATGACTTGCTCGATCACACCGAACACGCGATCTGGATGGGCGCGATGCGGCCGCTGGATCTGTCTGT TTTTTAA
Upstream 100 bases:
>100_bases TTTCGGCATTTTTCATGGCTGAGTTCCCTTTTGTTTTCCCTTGTATGGCGTGTGACATACGGTCAACGGCGAGGGTTCGA ACCGATTCAGAGGGTTTGCG
Downstream 100 bases:
>100_bases TCAGATGGTTTCTTCGGGTTCGCCCGGCAAATGCTCGTCCAGATGCAGCCACGGTAACTGGCTGTCGGTCCAGATATGCC GCTCGGCGGCGGCCTGCTCT
Product: hypothetical protein
Products: NA
Alternate protein names: Dopa 4 5-Dioxygenase Family Protein; Aromatic Ring-Cleaving Dioxygenase; Aromatic Ring-Cleaving Dioxygenase-Like Protein; Dioxygenase; Dopa 4 5-Dioxygenase Family; Aromatic Ring-Cleaving Dioxygenase-Like; DOPA-Dioxygenase-Like Protein; DOPA 4 5-Dioxygenase-Related Protein; DOPA 4 5-Dioxygenase
Number of amino acids: Translated: 108; Mature: 108
Protein sequence:
>108_residues MQTIKGYHAHVYYDASTIKQARALCEQAAALFPLKMGRVHERPVGPHPDWSCQLAFGPELIGDVLPWLALNRKGLVVFLH PDTGDDLLDHTEHAIWMGAMRPLDLSVF
Sequences:
>Translated_108_residues MQTIKGYHAHVYYDASTIKQARALCEQAAALFPLKMGRVHERPVGPHPDWSCQLAFGPELIGDVLPWLALNRKGLVVFLH PDTGDDLLDHTEHAIWMGAMRPLDLSVF >Mature_108_residues MQTIKGYHAHVYYDASTIKQARALCEQAAALFPLKMGRVHERPVGPHPDWSCQLAFGPELIGDVLPWLALNRKGLVVFLH PDTGDDLLDHTEHAIWMGAMRPLDLSVF
Specific function: Unknown
COG id: COG3805
COG function: function code Q; Aromatic ring-cleaving dioxygenase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 12115; Mature: 12115
Theoretical pI: Translated: 6.62; Mature: 6.62
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 3.7 %Met (Translated Protein) 5.6 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 3.7 %Met (Mature Protein) 5.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQTIKGYHAHVYYDASTIKQARALCEQAAALFPLKMGRVHERPVGPHPDWSCQLAFGPEL CCCCCCEEEEEEECHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEEEECHHH IGDVLPWLALNRKGLVVFLHPDTGDDLLDHTEHAIWMGAMRPLDLSVF HHHHHHHHHCCCCCEEEEECCCCCCHHHHHCCCEEEECCCCCCEEECC >Mature Secondary Structure MQTIKGYHAHVYYDASTIKQARALCEQAAALFPLKMGRVHERPVGPHPDWSCQLAFGPEL CCCCCCEEEEEEECHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEEEECHHH IGDVLPWLALNRKGLVVFLHPDTGDDLLDHTEHAIWMGAMRPLDLSVF HHHHHHHHHCCCCCEEEEECCCCCCHHHHHCCCEEEECCCCCCEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA