| Definition | Pseudomonas fluorescens Pf0-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007492 |
| Length | 6,438,405 |
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The map label for this gene is gmhB [H]
Identifier: 77456236
GI number: 77456236
Start: 10277
End: 10810
Strand: Reverse
Name: gmhB [H]
Synonym: Pfl01_0008
Alternate gene names: 77456236
Gene position: 10810-10277 (Counterclockwise)
Preceding gene: 77456237
Following gene: 77456235
Centisome position: 0.17
GC content: 60.86
Gene sequence:
>534_bases TTGAAACTGCTGATTCTCGATCGGGACGGAGTGATCAATTACGACTCCGACGCTTACATCAAGTCGGTGGAGGAGTGGAT TCCGCTGCCCGGCTCGATCGAAGCGATTGCGCAGTTGAGCAAGGCCGGCTGGACGGTGGCGGTCGCCACCAACCAGTCGG GCATTGCTCGCGGCTACTACGACCTCGCCACCCTCGATGCCATGCACGCGCGCCTGCGCGAACTGGTGGCGGAGCAGGGC GGTGAAGTCGGGCTGATCGTGTATTGCCCGCATGGGCCGGACGAGGGTTGCGACTGCCGCAAGCCGAAACCGGGGATGTT GAGAACCATCGCGCAGCATTACGACGTCGCGCTGACGAATGTCTGGTTCGTCGGCGACAGCCTTGGTGACCTGGAGGCCG CCAAAGCCGTCGATTCACAGCCCGTTTTGGTAAAGACCGGGAAAGGCGAAAAGACTCAGGCCAAGACCTTGCCGGTGGGC ACCCTGATTTTTGACGATCTCGCGGCGATTGCCGCAGAACTTATCCACAACTAG
Upstream 100 bases:
>100_bases GACGCCAACGTACGAGCCAACCGTTACGCGCTGCTGGCGCGTCTGCGTGGCCTGTTCCTGGGCGTTGCCGACATTTCGCT GCTGGGTTGAGGGACTGCTG
Downstream 100 bases:
>100_bases AGTGCTTCTGAAGTTCCTGACCAGGGATTGATCGGGAGTGCGCTTGAACAGTCGGGCATTGCCCGTAACGGTAAACGTCG CCATGTCGATACTGCAGGCC
Product: D,D-heptose 1,7-bisphosphate phosphatase
Products: NA
Alternate protein names: D-glycero-D-manno-heptose 1,7-bisphosphate phosphatase [H]
Number of amino acids: Translated: 177; Mature: 177
Protein sequence:
>177_residues MKLLILDRDGVINYDSDAYIKSVEEWIPLPGSIEAIAQLSKAGWTVAVATNQSGIARGYYDLATLDAMHARLRELVAEQG GEVGLIVYCPHGPDEGCDCRKPKPGMLRTIAQHYDVALTNVWFVGDSLGDLEAAKAVDSQPVLVKTGKGEKTQAKTLPVG TLIFDDLAAIAAELIHN
Sequences:
>Translated_177_residues MKLLILDRDGVINYDSDAYIKSVEEWIPLPGSIEAIAQLSKAGWTVAVATNQSGIARGYYDLATLDAMHARLRELVAEQG GEVGLIVYCPHGPDEGCDCRKPKPGMLRTIAQHYDVALTNVWFVGDSLGDLEAAKAVDSQPVLVKTGKGEKTQAKTLPVG TLIFDDLAAIAAELIHN >Mature_177_residues MKLLILDRDGVINYDSDAYIKSVEEWIPLPGSIEAIAQLSKAGWTVAVATNQSGIARGYYDLATLDAMHARLRELVAEQG GEVGLIVYCPHGPDEGCDCRKPKPGMLRTIAQHYDVALTNVWFVGDSLGDLEAAKAVDSQPVLVKTGKGEKTQAKTLPVG TLIFDDLAAIAAELIHN
Specific function: Converts the D-glycero-beta-D-manno-heptose 1,7- bisphosphate intermediate into D-glycero-beta-D-manno-heptose 1- phosphate by removing the phosphate group at the C-7 position [H]
COG id: COG0241
COG function: function code E; Histidinol phosphatase and related phosphatases
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the gmhB family [H]
Homologues:
Organism=Escherichia coli, GI1786399, Length=153, Percent_Identity=37.2549019607843, Blast_Score=103, Evalue=8e-24, Organism=Escherichia coli, GI87082027, Length=138, Percent_Identity=28.9855072463768, Blast_Score=78, Evalue=3e-16,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR023214 - InterPro: IPR006549 - InterPro: IPR006543 - InterPro: IPR013954 [H]
Pfam domain/function: PF08645 PNK3P [H]
EC number: NA
Molecular weight: Translated: 19046; Mature: 19046
Theoretical pI: Translated: 4.69; Mature: 4.69
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKLLILDRDGVINYDSDAYIKSVEEWIPLPGSIEAIAQLSKAGWTVAVATNQSGIARGYY CEEEEEECCCEEECCCHHHHHHHHHHCCCCCCHHHHHHHHHCCEEEEEEECCCCCCCCHH DLATLDAMHARLRELVAEQGGEVGLIVYCPHGPDEGCDCRKPKPGMLRTIAQHYDVALTN HHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHCCCEEE VWFVGDSLGDLEAAKAVDSQPVLVKTGKGEKTQAKTLPVGTLIFDDLAAIAAELIHN EEEECCCCCCHHHHHHCCCCCEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MKLLILDRDGVINYDSDAYIKSVEEWIPLPGSIEAIAQLSKAGWTVAVATNQSGIARGYY CEEEEEECCCEEECCCHHHHHHHHHHCCCCCCHHHHHHHHHCCEEEEEEECCCCCCCCHH DLATLDAMHARLRELVAEQGGEVGLIVYCPHGPDEGCDCRKPKPGMLRTIAQHYDVALTN HHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHCCCEEE VWFVGDSLGDLEAAKAVDSQPVLVKTGKGEKTQAKTLPVGTLIFDDLAAIAAELIHN EEEECCCCCCHHHHHHCCCCCEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 10984043; 12101286 [H]