Click here to switch to the map view.

The map label for this gene is glyS [H]

Identifier: 77456237

GI number: 77456237

Start: 10821

End: 12875

Strand: Reverse

Name: glyS [H]

Synonym: Pfl01_0009

Alternate gene names: 77456237

Gene position: 12875-10821 (Counterclockwise)

Preceding gene: 77456238

Following gene: 77456236

Centisome position: 0.2

GC content: 63.65

Gene sequence:

>2055_bases
ATGAGTGCTCAAGATTTTCTGGTTGAACTGGGCACCGAAGAACTGCCACCCAAAGCCCTGAACACCCTGGCCGAAGCGTT
CCTGGCCGGTATCGACAAGGGCCTGCAAGCTGCCGGCCTGAATTACGAGAGCAAAACCGTCTACGCCGCGCCGCGTCGTC
TGGCTGTGCTGATCACCGCGCTGGCCACCCAGCAGCCGGATCGCAGCATCAACCTCGACGGCCCGCCACGTCAGGCTGCG
TTCGATGCCGACGGCAACCCGACTCAAGCGGCACTGGGCTTCGCCAAGAAGTGCGGCGTCGAGCTGAGCGAAATCGACCA
GAGCGGTCCGAAACTGCGCTACAGCCAGAACATCGCCGGCAAGCCGACCGCCAGCCTGCTGCCGACCATCGTCGAAGACT
CGCTGAACGACCTGCCGATCCCGAAACGCATGCGCTGGGGTGCGCGCAAGGAAGAGTTCGTACGTCCGACCCAATGGCTG
GTGATGCTGCTCGGCGACCAGATCATCGACTGCACGATTCTCGCGCAGAAGGCTGGCCGTGAATCCCGTGGCCACCGCTT
CCACCACCCGCAAAGCGTGCGCATCGGTTCGCCGTCGAGCTACCTGGCCGACCTGCGTGCCGCCTACGTGCTGGCCGATG
CCAACGAGCGTCGCGAAATCATCAGCAAACGCACCGAAGAACTGGCGACCCGTCAGGAAGGCACTGCGATCGTGCCGCCG
GCGCTGCTCGACGAAGTGACCGCGCTGGTCGAGTGGCCAGTGCCGCTGGTGTGCTCGTTCGAGGAACGTTTCCTCGACGT
GCCGCAGGAAGCACTGATCACCACCATGCAGGACAACCAGAAGTACTTCTGCCTGCTGGATGCCGACGGCAAGTTGCTGC
CACGGTTCATCACCGTGGCCAACATCGAATCCAAAGACCCGCAGCAGATCATCGCCGGTAACGAGAAAGTGGTTCGCCCA
CGCCTCACCGACGCCGAGTTCTTCTTCAAGCAGGACAAGAAGCAGAAGCTCGAAGCCTTCAACGATCGCCTGCAGAACGT
GGTGTTCCAGGAAAAACTCGGCAGCGTCTACGACAAGGCCGAGCGGGTGTCGAAACTGGCCGCGTACATCGCCGCACGCA
TCGGCGGCAACGCTTCGTGGGCTGCCCGCGCAGGCCTGCTGTCCAAGTGCGACCTGGCCACCGAAATGGTCGGCGAGTTC
CCGGAGATGCAAGGTGTCGCCGGCTACTACTACGCGCTCAATGACGGCGAGCCGGAAGACGTCGCCCTGGCGCTGAACGA
GCAATACATGCCACGCGGTGCCGGCGCTGAACTGCCAGCCACCCTGACCGGTGCGGCCGTGGCCATCGCCGACAAGCTCG
ACACCCTGGTCGGCATCTTCGGCATCGGCATGCTGCCGACCGGCAGCAAAGACCCGTATGCCCTGCGCCGTGCGGCACTG
GGCGTGCTGCGGATCCTGATCGAGAAACAACTGGATCTGGACCTGAACGATGCCGTGGCGTTCGCCGTGAATGCGTTCGG
TGCCAAGGTCAAGGCTGCCGGCCTGAACGACGCGGTGCTGGAGTTCATCTTCGACCGTCTGCGTGCGCGTTACGAAGACG
AAGGCGTGGGTGTCGCCACCTACCTGTCGGTACGTGCCCTGAAGCCGGGTTCGGCGCTGGACTTCGACCAACGTGTGCAA
GCGGTGCAGGCCTTCCGCAAACTGCCGGAAGCGGCAGCGCTGGCGGCGGTGAACAAGCGTGTGTCGAACCTGCTGAGCAA
GGTGGAAGGCTCGGTGCCGACCGAAGTCCAGGCCAAGTACTTCGACAACGCCAACGAGTTCTCGCTGTACTCGGCGATCC
AGCAAGCGGACCAGGCTGTACAGCCAATGGCCGCGGCGCGTCAGTACAACGAATCGCTGGCACGCCTGGCCGCCCTGCGC
GAGCCGGTGGACGCGTTCTTCGACGCGGTGATGGTCAATGCCGAAGACGCCAACGTACGAGCCAACCGTTACGCGCTGCT
GGCGCGTCTGCGTGGCCTGTTCCTGGGCGTTGCCGACATTTCGCTGCTGGGTTGA

Upstream 100 bases:

>100_bases
CCGTCGCCCAAGCCTACCTGCTGGCCCGCGCCAAGCTGGGCTTCCCGATGGCAACCCCGGACCTGCGTGACGAAGTACTG
GCCAAGCTGGAGGCTGCACA

Downstream 100 bases:

>100_bases
GGGACTGCTGTTGAAACTGCTGATTCTCGATCGGGACGGAGTGATCAATTACGACTCCGACGCTTACATCAAGTCGGTGG
AGGAGTGGATTCCGCTGCCC

Product: glycyl-tRNA synthetase subunit beta

Products: NA

Alternate protein names: Glycine--tRNA ligase beta subunit; GlyRS [H]

Number of amino acids: Translated: 684; Mature: 683

Protein sequence:

>684_residues
MSAQDFLVELGTEELPPKALNTLAEAFLAGIDKGLQAAGLNYESKTVYAAPRRLAVLITALATQQPDRSINLDGPPRQAA
FDADGNPTQAALGFAKKCGVELSEIDQSGPKLRYSQNIAGKPTASLLPTIVEDSLNDLPIPKRMRWGARKEEFVRPTQWL
VMLLGDQIIDCTILAQKAGRESRGHRFHHPQSVRIGSPSSYLADLRAAYVLADANERREIISKRTEELATRQEGTAIVPP
ALLDEVTALVEWPVPLVCSFEERFLDVPQEALITTMQDNQKYFCLLDADGKLLPRFITVANIESKDPQQIIAGNEKVVRP
RLTDAEFFFKQDKKQKLEAFNDRLQNVVFQEKLGSVYDKAERVSKLAAYIAARIGGNASWAARAGLLSKCDLATEMVGEF
PEMQGVAGYYYALNDGEPEDVALALNEQYMPRGAGAELPATLTGAAVAIADKLDTLVGIFGIGMLPTGSKDPYALRRAAL
GVLRILIEKQLDLDLNDAVAFAVNAFGAKVKAAGLNDAVLEFIFDRLRARYEDEGVGVATYLSVRALKPGSALDFDQRVQ
AVQAFRKLPEAAALAAVNKRVSNLLSKVEGSVPTEVQAKYFDNANEFSLYSAIQQADQAVQPMAAARQYNESLARLAALR
EPVDAFFDAVMVNAEDANVRANRYALLARLRGLFLGVADISLLG

Sequences:

>Translated_684_residues
MSAQDFLVELGTEELPPKALNTLAEAFLAGIDKGLQAAGLNYESKTVYAAPRRLAVLITALATQQPDRSINLDGPPRQAA
FDADGNPTQAALGFAKKCGVELSEIDQSGPKLRYSQNIAGKPTASLLPTIVEDSLNDLPIPKRMRWGARKEEFVRPTQWL
VMLLGDQIIDCTILAQKAGRESRGHRFHHPQSVRIGSPSSYLADLRAAYVLADANERREIISKRTEELATRQEGTAIVPP
ALLDEVTALVEWPVPLVCSFEERFLDVPQEALITTMQDNQKYFCLLDADGKLLPRFITVANIESKDPQQIIAGNEKVVRP
RLTDAEFFFKQDKKQKLEAFNDRLQNVVFQEKLGSVYDKAERVSKLAAYIAARIGGNASWAARAGLLSKCDLATEMVGEF
PEMQGVAGYYYALNDGEPEDVALALNEQYMPRGAGAELPATLTGAAVAIADKLDTLVGIFGIGMLPTGSKDPYALRRAAL
GVLRILIEKQLDLDLNDAVAFAVNAFGAKVKAAGLNDAVLEFIFDRLRARYEDEGVGVATYLSVRALKPGSALDFDQRVQ
AVQAFRKLPEAAALAAVNKRVSNLLSKVEGSVPTEVQAKYFDNANEFSLYSAIQQADQAVQPMAAARQYNESLARLAALR
EPVDAFFDAVMVNAEDANVRANRYALLARLRGLFLGVADISLLG
>Mature_683_residues
SAQDFLVELGTEELPPKALNTLAEAFLAGIDKGLQAAGLNYESKTVYAAPRRLAVLITALATQQPDRSINLDGPPRQAAF
DADGNPTQAALGFAKKCGVELSEIDQSGPKLRYSQNIAGKPTASLLPTIVEDSLNDLPIPKRMRWGARKEEFVRPTQWLV
MLLGDQIIDCTILAQKAGRESRGHRFHHPQSVRIGSPSSYLADLRAAYVLADANERREIISKRTEELATRQEGTAIVPPA
LLDEVTALVEWPVPLVCSFEERFLDVPQEALITTMQDNQKYFCLLDADGKLLPRFITVANIESKDPQQIIAGNEKVVRPR
LTDAEFFFKQDKKQKLEAFNDRLQNVVFQEKLGSVYDKAERVSKLAAYIAARIGGNASWAARAGLLSKCDLATEMVGEFP
EMQGVAGYYYALNDGEPEDVALALNEQYMPRGAGAELPATLTGAAVAIADKLDTLVGIFGIGMLPTGSKDPYALRRAALG
VLRILIEKQLDLDLNDAVAFAVNAFGAKVKAAGLNDAVLEFIFDRLRARYEDEGVGVATYLSVRALKPGSALDFDQRVQA
VQAFRKLPEAAALAAVNKRVSNLLSKVEGSVPTEVQAKYFDNANEFSLYSAIQQADQAVQPMAAARQYNESLARLAALRE
PVDAFFDAVMVNAEDANVRANRYALLARLRGLFLGVADISLLG

Specific function: Unknown

COG id: COG0751

COG function: function code J; Glycyl-tRNA synthetase, beta subunit

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the class-II aminoacyl-tRNA synthetase family [H]

Homologues:

Organism=Escherichia coli, GI1789982, Length=688, Percent_Identity=51.3081395348837, Blast_Score=644, Evalue=0.0,

Paralogues:

None

Copy number: 80 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 400 Molecules/Cell In: Growth-Phase, Minimal-Media (Based on E. coli). 1,800 Molecules/Cell In: Glucose minimal media [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008909
- InterPro:   IPR006194
- InterPro:   IPR015944
- InterPro:   IPR002311 [H]

Pfam domain/function: PF05746 DALR_1; PF02092 tRNA_synt_2f [H]

EC number: =6.1.1.14 [H]

Molecular weight: Translated: 74617; Mature: 74486

Theoretical pI: Translated: 5.01; Mature: 5.01

Prosite motif: PS50861 AA_TRNA_LIGASE_II_GLYAB

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSAQDFLVELGTEELPPKALNTLAEAFLAGIDKGLQAAGLNYESKTVYAAPRRLAVLITA
CCHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCHHHCCCCCCCCEEEECHHHHHHHHHH
LATQQPDRSINLDGPPRQAAFDADGNPTQAALGFAKKCGVELSEIDQSGPKLRYSQNIAG
HHCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCHHHHCCCCCCEEECCCCCC
KPTASLLPTIVEDSLNDLPIPKRMRWGARKEEFVRPTQWLVMLLGDQIIDCTILAQKAGR
CCHHHHHHHHHHHCCCCCCCCHHHHCCCCHHHHCCHHHHHHHHHCCHHHHHHHHHHHCCC
ESRGHRFHHPQSVRIGSPSSYLADLRAAYVLADANERREIISKRTEELATRQEGTAIVPP
CCCCCCCCCCCCEECCCCHHHHHHHHHHHHEECCHHHHHHHHHHHHHHHHHCCCCEECCH
ALLDEVTALVEWPVPLVCSFEERFLDVPQEALITTMQDNQKYFCLLDADGKLLPRFITVA
HHHHHHHHHHHCCCCCEECCHHHHHCCCHHHHHHHHCCCCEEEEEECCCCCHHHHHHEEE
NIESKDPQQIIAGNEKVVRPRLTDAEFFFKQDKKQKLEAFNDRLQNVVFQEKLGSVYDKA
CCCCCCCHHHHCCCCEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ERVSKLAAYIAARIGGNASWAARAGLLSKCDLATEMVGEFPEMQGVAGYYYALNDGEPED
HHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCCCCC
VALALNEQYMPRGAGAELPATLTGAAVAIADKLDTLVGIFGIGMLPTGSKDPYALRRAAL
EEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHH
GVLRILIEKQLDLDLNDAVAFAVNAFGAKVKAAGLNDAVLEFIFDRLRARYEDEGVGVAT
HHHHHHHHHHCCCCCHHHHHHHHHHHCCEEEECCCCHHHHHHHHHHHHHHCCCCCCCEEH
YLSVRALKPGSALDFDQRVQAVQAFRKLPEAAALAAVNKRVSNLLSKVEGSVPTEVQAKY
HHEEEEECCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHH
FDNANEFSLYSAIQQADQAVQPMAAARQYNESLARLAALREPVDAFFDAVMVNAEDANVR
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCCC
ANRYALLARLRGLFLGVADISLLG
HHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
SAQDFLVELGTEELPPKALNTLAEAFLAGIDKGLQAAGLNYESKTVYAAPRRLAVLITA
CHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCHHHCCCCCCCCEEEECHHHHHHHHHH
LATQQPDRSINLDGPPRQAAFDADGNPTQAALGFAKKCGVELSEIDQSGPKLRYSQNIAG
HHCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCHHHHCCCCCCEEECCCCCC
KPTASLLPTIVEDSLNDLPIPKRMRWGARKEEFVRPTQWLVMLLGDQIIDCTILAQKAGR
CCHHHHHHHHHHHCCCCCCCCHHHHCCCCHHHHCCHHHHHHHHHCCHHHHHHHHHHHCCC
ESRGHRFHHPQSVRIGSPSSYLADLRAAYVLADANERREIISKRTEELATRQEGTAIVPP
CCCCCCCCCCCCEECCCCHHHHHHHHHHHHEECCHHHHHHHHHHHHHHHHHCCCCEECCH
ALLDEVTALVEWPVPLVCSFEERFLDVPQEALITTMQDNQKYFCLLDADGKLLPRFITVA
HHHHHHHHHHHCCCCCEECCHHHHHCCCHHHHHHHHCCCCEEEEEECCCCCHHHHHHEEE
NIESKDPQQIIAGNEKVVRPRLTDAEFFFKQDKKQKLEAFNDRLQNVVFQEKLGSVYDKA
CCCCCCCHHHHCCCCEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ERVSKLAAYIAARIGGNASWAARAGLLSKCDLATEMVGEFPEMQGVAGYYYALNDGEPED
HHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCCCCC
VALALNEQYMPRGAGAELPATLTGAAVAIADKLDTLVGIFGIGMLPTGSKDPYALRRAAL
EEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHH
GVLRILIEKQLDLDLNDAVAFAVNAFGAKVKAAGLNDAVLEFIFDRLRARYEDEGVGVAT
HHHHHHHHHHCCCCCHHHHHHHHHHHCCEEEECCCCHHHHHHHHHHHHHHCCCCCCCEEH
YLSVRALKPGSALDFDQRVQAVQAFRKLPEAAALAAVNKRVSNLLSKVEGSVPTEVQAKY
HHEEEEECCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHH
FDNANEFSLYSAIQQADQAVQPMAAARQYNESLARLAALREPVDAFFDAVMVNAEDANVR
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCCC
ANRYALLARLRGLFLGVADISLLG
HHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA