| Definition | Pseudomonas fluorescens Pf0-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007492 |
| Length | 6,438,405 |
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The map label for this gene is secA [H]
Identifier: 255961263
GI number: 255961263
Start: 4985551
End: 4988355
Strand: Reverse
Name: secA [H]
Synonym: Pfl01_4428
Alternate gene names: 255961263
Gene position: 4988355-4985551 (Counterclockwise)
Preceding gene: 77460651
Following gene: 77460648
Centisome position: 77.48
GC content: 59.54
Gene sequence:
>2805_bases ATGAGGGCTGCACGGGCGACTCACGGGGCCGCCCTCCATCCCTTTAGTGTGGAAGATCCTGCCGATATGTTTGCGCCTTT GTTAAAGAAACTTTTTGGAAGCAAGAACGAGCGTGAAGTCAAACGCATGCTCAAGACGGTGCAGCTCGTCAATGCCTTCG AAGAGAAGATGGTCGCCCTCTCGGACGATCAACTGCGCGCCAAGACCGCAGAGTTCAAAGACCGCATTGCCAAGGGGGAG ACCCTTGATCAGCTGTTGCCGGAAGCCTTTGCGGTTGCCCGCGAAGCCGGCAAGCGGGTCATGGGCATGCGCCACTTCGA CGTCCAGCTGATTGGCGGCATGACCTTGCACGAAGGCAAGATTGCCGAAATGCGCACCGGTGAAGGCAAGACCCTGGTGG GTACCCTGGGCGTTTACCTCAACGCGCTGTCCGGCAAGGGCGTGCACGTTGTGACCGTGAACGATTACCTGGCCCGCCGC GACGCCAACTGGATGCGTCCGCTGTATGAATTCCTCGGCCTGAGCGTCGGCATCGTGACGCCTTTCCAGCCGCCGGAAGA GAAACGCGCCGCCTACGCCGCCGACATCACCTACGGCACCAACAACGAATTCGGTTTCGACTACCTGCGCGACAACATGG CGTTCAGCATGGAAGAGAAATTCCAGCGCGAACTCAATTTTGCCGTGATCGACGAAGTCGACTCCATCCTCATCGACGAA GCGCGTACCCCGCTGATCATTTCCGGTCAGGCCGAGGACAGTTCCAGGTTGTACATCGAGATCAACAAGCTGATCCCGAA ACTCAAGCTGCACGTCGAAGAAGTCGAAGGCGAAGTCACCCAGGAAGGCCACTACACCGTTGACGAGAAGACCCGTCAGG TGGAACTCAACGAAGCCGGTCACCAGTTCATCGAAGACCAGCTGACCAGCATAGGTCTGCTGGCCGAGGGCGAGAGCCTG TACTCGGCGCACAACCTGAGCCTGCTGACTCACGTCTACGCCGGTCTGCGTGCGCACAAGCTGTTCCACCGCAACGTTGA ATACATCGTGCAGGACGGTCAGGTCGTACTGGTCGACGAACACACCGGTCGTACCATGCCCGGCCGTCGTCTGTCCGAAG GCCTGCACCAGGCCATCGAGGCCAAGGAAAACCTGAACATCCAGGCCGAGAGCCAGACGCTGGCATCGACCACGTTCCAG AACTACTTCCGTCTGTACGACAAGTTGTCCGGCATGACCGGTACCGCGGACACCGAAGCGTTCGAATTCCATCAGATCTA TGGCCTGCAAGTCGTCGTGATCCCGACCAACAAGCCGTTGGCCCGTAAGGACTACAACGACCTGGTGTTCCTGACCGCCG AAGAGAAATACGCGGCGATCGTCAATGACATCAAGGAAAGCATGGCCGCCGGCCGGCCGGTGCTGGTGGGTACTGCGACC ATCGAAACCTCCGAGCACATGTCCGCATTGCTCGAGAAGGAAGGCATCGAACACAAGGTTCTGAACGCCAAGTTCCACGA AAAAGAAGCTGAAATCATCGCGCAGGCCGGTCGTCCGGGCGCACTGACCATCGCTACCAACATGGCCGGTCGTGGTACCG ACATCCTGTTGGGCGGCAACTGGGAAGTTGAAGTCGCGTCGCTGGAAAACCCGACCCCTGAGCAGATCGCCCAGATCAAG GCCGACTGGCAGAAGCGTCACCAGCAAGTGCTGGAGTCCGGCGGCCTGCAGGTGATCGCGTCCGAGCGTCACGAATCCCG TCGTATCGACAACCAGCTGCGTGGCCGTGCCGGCCGTCAGGGTGACGCCGGTTCCAGCCGCTTCTACCTGTCGCTGGAAG ACAGCCTGATGCGCATCTTCGCCTCTGACCGGGTGAAGAACTTCATGAAAGCCCTGGGCATGCAGTCCGGTGAAGCGATC GAGCACCGCATGGTGACCAACGCCATCGAGAAGGCACAGCGCAAGGTTGAAGGCCGCAACTTCGATATTCGCAAGCAACT GCTCGAGTTCGACGACGTCAACAACGAACAGCGTAAAGTGATCTATCACATGCGTAACACGTTGCTGGCTGCGGACAACA TCGGCGAAACCATCGCTGATTTCCGTCAGGACGTCCTGAACGCCACCGTCAGCGCACACATTCCGCCGCAATCGCTGCCA GAGCAGTGGGACGTGGCCGGTCTGGAGGCGTCGATCGCCAGCGACTTCGGCGTGAAGCTGCCGATCCAGCAATGGCTCGA CGAAGACGATCACCTGTACGAAGAAACCCTGCGTGAGAAGCTGATGAACGAGCTGATCGCCGCGTACAACGAAAAAGAAG ACCAGGCCGGCGCCGAAGCCCTGCGCTCCTTCGAGAAGCAGATCGTGCTGCGTGTGCTGGACGACCTGTGGAAAGACCAC CTGTCGACCATGGATCATCTGCGTCACGGCATCCACCTGCGTGGTTATGCGCAGAAGAACCCGAAGCAGGAATACAAGCG CGAGTCCTTCACGCTGTTCTCCGAGCTGCTGGATTCGATCAAGCGCGACTCGATCCGTGTGCTGTCGCACGTTCAGGTTC GCCGCGAAGATCCGGCCGAAGAAGAGCAACGCCTGCGTCAGGAAGCCGAAGCGCTGGCCGCGCGCATGCAGTTCGAACAC GCCGAGGCTCCTGGCCTGGAAGCGCAACCGGAACTGGTCGGTGAAGAGGTCGACGTGGCCCTCGCTGCCGCGCCGGTTCG CAACGAGCAGAAGCTGGGCCGCAACGAACTGTGCTACTGCGGTTCGGGCAAGAAATTCAAGCATTGCCACGGGCAGATCC AGTAA
Upstream 100 bases:
>100_bases TATTTTAAGTGAGCCCCGTCAAAGCGCAGTGCCAGCATCGTGGAATATCCCCACTTTCCTCACCACCGTTTCCGGGTAGA ATGCTCGTTCGCATGCGGCC
Downstream 100 bases:
>100_bases ACCCCGTTTCAATCGCTGAAATACCCGCGCCGCGACCGGCACCAGCCGTCGCGGCGTTTTGCCATTTACACCACCGTCAC TACGCTTGGCGGTGCTGACA
Product: preprotein translocase subunit SecA
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 934; Mature: 934
Protein sequence:
>934_residues MRAARATHGAALHPFSVEDPADMFAPLLKKLFGSKNEREVKRMLKTVQLVNAFEEKMVALSDDQLRAKTAEFKDRIAKGE TLDQLLPEAFAVAREAGKRVMGMRHFDVQLIGGMTLHEGKIAEMRTGEGKTLVGTLGVYLNALSGKGVHVVTVNDYLARR DANWMRPLYEFLGLSVGIVTPFQPPEEKRAAYAADITYGTNNEFGFDYLRDNMAFSMEEKFQRELNFAVIDEVDSILIDE ARTPLIISGQAEDSSRLYIEINKLIPKLKLHVEEVEGEVTQEGHYTVDEKTRQVELNEAGHQFIEDQLTSIGLLAEGESL YSAHNLSLLTHVYAGLRAHKLFHRNVEYIVQDGQVVLVDEHTGRTMPGRRLSEGLHQAIEAKENLNIQAESQTLASTTFQ NYFRLYDKLSGMTGTADTEAFEFHQIYGLQVVVIPTNKPLARKDYNDLVFLTAEEKYAAIVNDIKESMAAGRPVLVGTAT IETSEHMSALLEKEGIEHKVLNAKFHEKEAEIIAQAGRPGALTIATNMAGRGTDILLGGNWEVEVASLENPTPEQIAQIK ADWQKRHQQVLESGGLQVIASERHESRRIDNQLRGRAGRQGDAGSSRFYLSLEDSLMRIFASDRVKNFMKALGMQSGEAI EHRMVTNAIEKAQRKVEGRNFDIRKQLLEFDDVNNEQRKVIYHMRNTLLAADNIGETIADFRQDVLNATVSAHIPPQSLP EQWDVAGLEASIASDFGVKLPIQQWLDEDDHLYEETLREKLMNELIAAYNEKEDQAGAEALRSFEKQIVLRVLDDLWKDH LSTMDHLRHGIHLRGYAQKNPKQEYKRESFTLFSELLDSIKRDSIRVLSHVQVRREDPAEEEQRLRQEAEALAARMQFEH AEAPGLEAQPELVGEEVDVALAAAPVRNEQKLGRNELCYCGSGKKFKHCHGQIQ
Sequences:
>Translated_934_residues MRAARATHGAALHPFSVEDPADMFAPLLKKLFGSKNEREVKRMLKTVQLVNAFEEKMVALSDDQLRAKTAEFKDRIAKGE TLDQLLPEAFAVAREAGKRVMGMRHFDVQLIGGMTLHEGKIAEMRTGEGKTLVGTLGVYLNALSGKGVHVVTVNDYLARR DANWMRPLYEFLGLSVGIVTPFQPPEEKRAAYAADITYGTNNEFGFDYLRDNMAFSMEEKFQRELNFAVIDEVDSILIDE ARTPLIISGQAEDSSRLYIEINKLIPKLKLHVEEVEGEVTQEGHYTVDEKTRQVELNEAGHQFIEDQLTSIGLLAEGESL YSAHNLSLLTHVYAGLRAHKLFHRNVEYIVQDGQVVLVDEHTGRTMPGRRLSEGLHQAIEAKENLNIQAESQTLASTTFQ NYFRLYDKLSGMTGTADTEAFEFHQIYGLQVVVIPTNKPLARKDYNDLVFLTAEEKYAAIVNDIKESMAAGRPVLVGTAT IETSEHMSALLEKEGIEHKVLNAKFHEKEAEIIAQAGRPGALTIATNMAGRGTDILLGGNWEVEVASLENPTPEQIAQIK ADWQKRHQQVLESGGLQVIASERHESRRIDNQLRGRAGRQGDAGSSRFYLSLEDSLMRIFASDRVKNFMKALGMQSGEAI EHRMVTNAIEKAQRKVEGRNFDIRKQLLEFDDVNNEQRKVIYHMRNTLLAADNIGETIADFRQDVLNATVSAHIPPQSLP EQWDVAGLEASIASDFGVKLPIQQWLDEDDHLYEETLREKLMNELIAAYNEKEDQAGAEALRSFEKQIVLRVLDDLWKDH LSTMDHLRHGIHLRGYAQKNPKQEYKRESFTLFSELLDSIKRDSIRVLSHVQVRREDPAEEEQRLRQEAEALAARMQFEH AEAPGLEAQPELVGEEVDVALAAAPVRNEQKLGRNELCYCGSGKKFKHCHGQIQ >Mature_934_residues MRAARATHGAALHPFSVEDPADMFAPLLKKLFGSKNEREVKRMLKTVQLVNAFEEKMVALSDDQLRAKTAEFKDRIAKGE TLDQLLPEAFAVAREAGKRVMGMRHFDVQLIGGMTLHEGKIAEMRTGEGKTLVGTLGVYLNALSGKGVHVVTVNDYLARR DANWMRPLYEFLGLSVGIVTPFQPPEEKRAAYAADITYGTNNEFGFDYLRDNMAFSMEEKFQRELNFAVIDEVDSILIDE ARTPLIISGQAEDSSRLYIEINKLIPKLKLHVEEVEGEVTQEGHYTVDEKTRQVELNEAGHQFIEDQLTSIGLLAEGESL YSAHNLSLLTHVYAGLRAHKLFHRNVEYIVQDGQVVLVDEHTGRTMPGRRLSEGLHQAIEAKENLNIQAESQTLASTTFQ NYFRLYDKLSGMTGTADTEAFEFHQIYGLQVVVIPTNKPLARKDYNDLVFLTAEEKYAAIVNDIKESMAAGRPVLVGTAT IETSEHMSALLEKEGIEHKVLNAKFHEKEAEIIAQAGRPGALTIATNMAGRGTDILLGGNWEVEVASLENPTPEQIAQIK ADWQKRHQQVLESGGLQVIASERHESRRIDNQLRGRAGRQGDAGSSRFYLSLEDSLMRIFASDRVKNFMKALGMQSGEAI EHRMVTNAIEKAQRKVEGRNFDIRKQLLEFDDVNNEQRKVIYHMRNTLLAADNIGETIADFRQDVLNATVSAHIPPQSLP EQWDVAGLEASIASDFGVKLPIQQWLDEDDHLYEETLREKLMNELIAAYNEKEDQAGAEALRSFEKQIVLRVLDDLWKDH LSTMDHLRHGIHLRGYAQKNPKQEYKRESFTLFSELLDSIKRDSIRVLSHVQVRREDPAEEEQRLRQEAEALAARMQFEH AEAPGLEAQPELVGEEVDVALAAAPVRNEQKLGRNELCYCGSGKKFKHCHGQIQ
Specific function: Part of the Sec protein translocase complex. Interacts with the secYEG preprotein conducting channel. Has a central role in coupling the hydrolysis of ATP to the transfer of proteins into and across the cell membrane, serving both as a receptor for the pr
COG id: COG0653
COG function: function code U; Preprotein translocase subunit SecA (ATPase, RNA helicase)
Gene ontology:
Cell location: Cell inner membrane; Peripheral membrane protein; Cytoplasmic side. Cytoplasm (By similarity). Note=Distribution is 50-50 (By similarity) [H]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the secA family [H]
Homologues:
Organism=Escherichia coli, GI1786287, Length=914, Percent_Identity=63.019693654267, Blast_Score=1171, Evalue=0.0,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004027 - InterPro: IPR000185 - InterPro: IPR011115 - InterPro: IPR014018 - InterPro: IPR011130 - InterPro: IPR011116 [H]
Pfam domain/function: PF02810 SEC-C; PF07517 SecA_DEAD; PF01043 SecA_PP_bind; PF07516 SecA_SW [H]
EC number: NA
Molecular weight: Translated: 105234; Mature: 105234
Theoretical pI: Translated: 5.44; Mature: 5.44
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRAARATHGAALHPFSVEDPADMFAPLLKKLFGSKNEREVKRMLKTVQLVNAFEEKMVAL CCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHC SDDQLRAKTAEFKDRIAKGETLDQLLPEAFAVAREAGKRVMGMRHFDVQLIGGMTLHEGK CCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCEECCEEEECCEEECCCC IAEMRTGEGKTLVGTLGVYLNALSGKGVHVVTVNDYLARRDANWMRPLYEFLGLSVGIVT CCEEECCCCCEEHEEHHHHHHHCCCCCEEEEEECHHHHHCCCHHHHHHHHHHCCCEEEEC PFQPPEEKRAAYAADITYGTNNEFGFDYLRDNMAFSMEEKFQRELNFAVIDEVDSILIDE CCCCCHHHHCEEEEEEEECCCCCCCHHHHHHCHHHHHHHHHHHHCCHHHHHHHHHHHHHC ARTPLIISGQAEDSSRLYIEINKLIPKLKLHVEEVEGEVTQEGHYTVDEKTRQVELNEAG CCCCEEEECCCCCCCEEEEEHHHHHHHHHHHHHHHCCCCCCCCCEEECCCHHEEEHHHHH HQFIEDQLTSIGLLAEGESLYSAHNLSLLTHVYAGLRAHKLFHRNVEYIVQDGQVVLVDE HHHHHHHHHHHCEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHEEECCEEEEEEC HTGRTMPGRRLSEGLHQAIEAKENLNIQAESQTLASTTFQNYFRLYDKLSGMTGTADTEA CCCCCCCCHHHHHHHHHHHHHHHCCCEEECCHHHHHHHHHHHHHHHHHHCCCCCCCCCCH FEFHQIYGLQVVVIPTNKPLARKDYNDLVFLTAEEKYAAIVNDIKESMAAGRPVLVGTAT HHHHEEECEEEEEEECCCCCCCCCCCCEEEEEECHHHHHHHHHHHHHHHCCCCEEEEEEE IETSEHMSALLEKEGIEHKVLNAKFHEKEAEIIAQAGRPGALTIATNMAGRGTDILLGGN ECCHHHHHHHHHHCCCCHHHHCCHHHHHHHHHHHHCCCCCEEEEEECCCCCCCEEEECCC WEVEVASLENPTPEQIAQIKADWQKRHQQVLESGGLQVIASERHESRRIDNQLRGRAGRQ EEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHCCCEEEEECCHHHHHHHHHHHHCCCCCC GDAGSSRFYLSLEDSLMRIFASDRVKNFMKALGMQSGEAIEHRMVTNAIEKAQRKVEGRN CCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCC FDIRKQLLEFDDVNNEQRKVIYHMRNTLLAADNIGETIADFRQDVLNATVSAHIPPQSLP HHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC EQWDVAGLEASIASDFGVKLPIQQWLDEDDHLYEETLREKLMNELIAAYNEKEDQAGAEA CCCCCCCCHHHHHCCCCCCCCHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHH LRSFEKQIVLRVLDDLWKDHLSTMDHLRHGIHLRGYAQKNPKQEYKRESFTLFSELLDSI HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHH KRDSIRVLSHVQVRREDPAEEEQRLRQEAEALAARMQFEHAEAPGLEAQPELVGEEVDVA HHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHCCCHHCEE LAAAPVRNEQKLGRNELCYCGSGKKFKHCHGQIQ EEECCCCCHHHCCCCCEEEECCCCCHHCCCCCCC >Mature Secondary Structure MRAARATHGAALHPFSVEDPADMFAPLLKKLFGSKNEREVKRMLKTVQLVNAFEEKMVAL CCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHC SDDQLRAKTAEFKDRIAKGETLDQLLPEAFAVAREAGKRVMGMRHFDVQLIGGMTLHEGK CCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCEECCEEEECCEEECCCC IAEMRTGEGKTLVGTLGVYLNALSGKGVHVVTVNDYLARRDANWMRPLYEFLGLSVGIVT CCEEECCCCCEEHEEHHHHHHHCCCCCEEEEEECHHHHHCCCHHHHHHHHHHCCCEEEEC PFQPPEEKRAAYAADITYGTNNEFGFDYLRDNMAFSMEEKFQRELNFAVIDEVDSILIDE CCCCCHHHHCEEEEEEEECCCCCCCHHHHHHCHHHHHHHHHHHHCCHHHHHHHHHHHHHC ARTPLIISGQAEDSSRLYIEINKLIPKLKLHVEEVEGEVTQEGHYTVDEKTRQVELNEAG CCCCEEEECCCCCCCEEEEEHHHHHHHHHHHHHHHCCCCCCCCCEEECCCHHEEEHHHHH HQFIEDQLTSIGLLAEGESLYSAHNLSLLTHVYAGLRAHKLFHRNVEYIVQDGQVVLVDE HHHHHHHHHHHCEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHEEECCEEEEEEC HTGRTMPGRRLSEGLHQAIEAKENLNIQAESQTLASTTFQNYFRLYDKLSGMTGTADTEA CCCCCCCCHHHHHHHHHHHHHHHCCCEEECCHHHHHHHHHHHHHHHHHHCCCCCCCCCCH FEFHQIYGLQVVVIPTNKPLARKDYNDLVFLTAEEKYAAIVNDIKESMAAGRPVLVGTAT HHHHEEECEEEEEEECCCCCCCCCCCCEEEEEECHHHHHHHHHHHHHHHCCCCEEEEEEE IETSEHMSALLEKEGIEHKVLNAKFHEKEAEIIAQAGRPGALTIATNMAGRGTDILLGGN ECCHHHHHHHHHHCCCCHHHHCCHHHHHHHHHHHHCCCCCEEEEEECCCCCCCEEEECCC WEVEVASLENPTPEQIAQIKADWQKRHQQVLESGGLQVIASERHESRRIDNQLRGRAGRQ EEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHCCCEEEEECCHHHHHHHHHHHHCCCCCC GDAGSSRFYLSLEDSLMRIFASDRVKNFMKALGMQSGEAIEHRMVTNAIEKAQRKVEGRN CCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCC FDIRKQLLEFDDVNNEQRKVIYHMRNTLLAADNIGETIADFRQDVLNATVSAHIPPQSLP HHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC EQWDVAGLEASIASDFGVKLPIQQWLDEDDHLYEETLREKLMNELIAAYNEKEDQAGAEA CCCCCCCCHHHHHCCCCCCCCHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHH LRSFEKQIVLRVLDDLWKDHLSTMDHLRHGIHLRGYAQKNPKQEYKRESFTLFSELLDSI HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHH KRDSIRVLSHVQVRREDPAEEEQRLRQEAEALAARMQFEHAEAPGLEAQPELVGEEVDVA HHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHCCCHHCEE LAAAPVRNEQKLGRNELCYCGSGKKFKHCHGQIQ EEECCCCCHHHCCCCCEEEECCCCCHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: NA