Definition Pseudomonas fluorescens Pf0-1 chromosome, complete genome.
Accession NC_007492
Length 6,438,405

Click here to switch to the map view.

The map label for this gene is yjgR [H]

Identifier: 77460651

GI number: 77460651

Start: 4989063

End: 4990550

Strand: Reverse

Name: yjgR [H]

Synonym: Pfl01_4430

Alternate gene names: 77460651

Gene position: 4990550-4989063 (Counterclockwise)

Preceding gene: 77460656

Following gene: 255961263

Centisome position: 77.51

GC content: 64.52

Gene sequence:

>1488_bases
ATGCCTGACTCCTCGCAACTCGTAATCGGCGCCGACCTCGCCGGGCAACCGATCGCTCAGGCCATGCGCCTGGCCAACCG
TCACGGACTGGTGGCCGGGGCTACCGGTACCGGCAAGACCGTCACCTTGCAGCGCCTGGCCGAGGCGTTCAGCGACGCCG
GGGTTGCGGTGTTCGCCGCCGACGTCAAGGGCGACCTGTGCGGCCTCGGTGCTGCCGGCAACCCTCAGGGCAAGATCGCC
GAGCGCATCGCCGGCATGCCGTGGCTCAATCACAAGCCTCAGGCGTATCCTGTGACCTTGTGGGACATCCACGGTCAGTC
CGGTCATCCGCTGCGCACTACGTTGAGTGAAATGGGCCCGCTGCTGATCGGCGCCTTACTGGAACTGACCGACAGCCAGC
AGTCGGCGCTGTACGCAGCGTTCAAGGTGGCGGATCGCGAAGGCCTGTTGTTGCTGGATCTCAAGGATCTGAAGGCACTG
CTCAATCATCTCAAGGACAATCCGCAACTGCTGGGCGAAGACGCGGCGCTGTTCACCACCGGCTCCAGTCAGGCGCTGTT
GCGGCGTCTGGCGACGCTGGAGCAGCAGGGCGCCGAGGCGTTGTTCGGCGAGCCGGCGTTGCAACTCGAAGACATTCTGC
AGCCGACCGCCGACGGTCGCGGACGCATTCATCTGCTGGATGCCAGTCGTCTGGTGCATGAGGCGCCGAAGGTCTATGCA
ACGTTCCTGCTGTGGCTGCTGGCCGAACTGTTCGAGCAATTGCCTGAGCGTGGCGATGCCGACAAACCGTTGCTGGCGCT
GTTTTTCGATGAGGCGCATTTGTTGTTCGGTGACACGCCCAAGGCATTGCAGGAGCGGCTTGAGCAAGTGGTGCGGCTGA
TTCGCTCGAAAGGTGTGGGCGTGTATTTCGTCACCCAGTCGCCGGGCGATCTGCCGGACGATGTGCTGGCGCAACTGGGG
CTGCGGATCCAGCACGGCCTGCGCGCATTTACTGCCAAGGAGCAGAAATCCCTGCGGGCGGTGGCGGATGGCTTCCGGCC
GAATCCGGCGTTCGACACATTGTCGGTGCTCACCGAACTCGGGATTGGCGAGGCCCTGGTCGGCACCTTGCAAGAAAAGG
GCACGCCGGAAATGGCGCAGCGGGTGCTGGTGGCGCCGCCGCAATCGCGGATCGGGCCGTTGACCGAGACTGAGCGCACA
ATGCTGATCGCCGGTTCGCCGTTCAAGGGCCGTTATGACAAACCGATTGATCGCGAGTCGGCCTATGAAATCCTGATGGG
GCGCAAGGGGCTGGCGCCGGAGGCTGAAGCGGCGCCGGGCAAACCGGCCGCTGAAGAGCCAAGCCTGGCGGACAGGGCCG
GAGAATTTCTCGGCACGGCGGCGGGGCAGGCGCTCAAGTCGGCGATGCGCCAGGCAGCGAACTCGCTGGGTAAACAATTG
GTGCGCGGCCTGATGGGGTCATTGCTCGGTGGCAGCAAACGCCGCTGA

Upstream 100 bases:

>100_bases
TCCGCTTCTCCTTAGGGAAATCTCCGATGCGGATGTCAGTCGCATCTGTCACCTTTAGCTATCGGCCATGATCGACAAAG
ATTAACCATTGGGTGACCAA

Downstream 100 bases:

>100_bases
TCAATAAGGCTCAGGCCTTGGGTTTGGCGTGGGCGGCCAGTCGTTCCAGTGCTGCCCGCAGATTCGGATCGCTGATCCCG
TCGGCGGTGGCCTGGATGGT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 495; Mature: 494

Protein sequence:

>495_residues
MPDSSQLVIGADLAGQPIAQAMRLANRHGLVAGATGTGKTVTLQRLAEAFSDAGVAVFAADVKGDLCGLGAAGNPQGKIA
ERIAGMPWLNHKPQAYPVTLWDIHGQSGHPLRTTLSEMGPLLIGALLELTDSQQSALYAAFKVADREGLLLLDLKDLKAL
LNHLKDNPQLLGEDAALFTTGSSQALLRRLATLEQQGAEALFGEPALQLEDILQPTADGRGRIHLLDASRLVHEAPKVYA
TFLLWLLAELFEQLPERGDADKPLLALFFDEAHLLFGDTPKALQERLEQVVRLIRSKGVGVYFVTQSPGDLPDDVLAQLG
LRIQHGLRAFTAKEQKSLRAVADGFRPNPAFDTLSVLTELGIGEALVGTLQEKGTPEMAQRVLVAPPQSRIGPLTETERT
MLIAGSPFKGRYDKPIDRESAYEILMGRKGLAPEAEAAPGKPAAEEPSLADRAGEFLGTAAGQALKSAMRQAANSLGKQL
VRGLMGSLLGGSKRR

Sequences:

>Translated_495_residues
MPDSSQLVIGADLAGQPIAQAMRLANRHGLVAGATGTGKTVTLQRLAEAFSDAGVAVFAADVKGDLCGLGAAGNPQGKIA
ERIAGMPWLNHKPQAYPVTLWDIHGQSGHPLRTTLSEMGPLLIGALLELTDSQQSALYAAFKVADREGLLLLDLKDLKAL
LNHLKDNPQLLGEDAALFTTGSSQALLRRLATLEQQGAEALFGEPALQLEDILQPTADGRGRIHLLDASRLVHEAPKVYA
TFLLWLLAELFEQLPERGDADKPLLALFFDEAHLLFGDTPKALQERLEQVVRLIRSKGVGVYFVTQSPGDLPDDVLAQLG
LRIQHGLRAFTAKEQKSLRAVADGFRPNPAFDTLSVLTELGIGEALVGTLQEKGTPEMAQRVLVAPPQSRIGPLTETERT
MLIAGSPFKGRYDKPIDRESAYEILMGRKGLAPEAEAAPGKPAAEEPSLADRAGEFLGTAAGQALKSAMRQAANSLGKQL
VRGLMGSLLGGSKRR
>Mature_494_residues
PDSSQLVIGADLAGQPIAQAMRLANRHGLVAGATGTGKTVTLQRLAEAFSDAGVAVFAADVKGDLCGLGAAGNPQGKIAE
RIAGMPWLNHKPQAYPVTLWDIHGQSGHPLRTTLSEMGPLLIGALLELTDSQQSALYAAFKVADREGLLLLDLKDLKALL
NHLKDNPQLLGEDAALFTTGSSQALLRRLATLEQQGAEALFGEPALQLEDILQPTADGRGRIHLLDASRLVHEAPKVYAT
FLLWLLAELFEQLPERGDADKPLLALFFDEAHLLFGDTPKALQERLEQVVRLIRSKGVGVYFVTQSPGDLPDDVLAQLGL
RIQHGLRAFTAKEQKSLRAVADGFRPNPAFDTLSVLTELGIGEALVGTLQEKGTPEMAQRVLVAPPQSRIGPLTETERTM
LIAGSPFKGRYDKPIDRESAYEILMGRKGLAPEAEAAPGKPAAEEPSLADRAGEFLGTAAGQALKSAMRQAANSLGKQLV
RGLMGSLLGGSKRR

Specific function: Unknown

COG id: COG0433

COG function: function code R; Predicted ATPase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: To E.coli yjiB [H]

Homologues:

Organism=Escherichia coli, GI1790714, Length=488, Percent_Identity=49.1803278688525, Blast_Score=444, Evalue=1e-126,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008571 [H]

Pfam domain/function: PF05872 DUF853 [H]

EC number: NA

Molecular weight: Translated: 52880; Mature: 52749

Theoretical pI: Translated: 6.27; Mature: 6.27

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPDSSQLVIGADLAGQPIAQAMRLANRHGLVAGATGTGKTVTLQRLAEAFSDAGVAVFAA
CCCCCCEEEECCCCCCHHHHHHHHHHHCCEEEECCCCCCHHHHHHHHHHHCCCCEEEEEE
DVKGDLCGLGAAGNPQGKIAERIAGMPWLNHKPQAYPVTLWDIHGQSGHPLRTTLSEMGP
CCCCCEEECCCCCCCCHHHHHHHCCCCCCCCCCCEEEEEEEEECCCCCCHHHHHHHHHHH
LLIGALLELTDSQQSALYAAFKVADREGLLLLDLKDLKALLNHLKDNPQLLGEDAALFTT
HHHHHHHHHCCCHHHHHHHHHHCCCCCCEEEEEHHHHHHHHHHCCCCCHHCCCCCEEEEC
GSSQALLRRLATLEQQGAEALFGEPALQLEDILQPTADGRGRIHLLDASRLVHEAPKVYA
CCHHHHHHHHHHHHHHCCHHHHCCCCHHHHHHHCCCCCCCCEEEEECHHHHHHHHHHHHH
TFLLWLLAELFEQLPERGDADKPLLALFFDEAHLLFGDTPKALQERLEQVVRLIRSKGVG
HHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCEEECCCHHHHHHHHHHHHHHHHHCCCE
VYFVTQSPGDLPDDVLAQLGLRIQHGLRAFTAKEQKSLRAVADGFRPNPAFDTLSVLTEL
EEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHH
GIGEALVGTLQEKGTPEMAQRVLVAPPQSRIGPLTETERTMLIAGSPFKGRYDKPIDRES
CCCHHHHHHHHHCCCHHHHHHEECCCCHHHCCCCCCCCCEEEEECCCCCCCCCCCCCHHH
AYEILMGRKGLAPEAEAAPGKPAAEEPSLADRAGEFLGTAAGQALKSAMRQAANSLGKQL
HHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VRGLMGSLLGGSKRR
HHHHHHHHCCCCCCC
>Mature Secondary Structure 
PDSSQLVIGADLAGQPIAQAMRLANRHGLVAGATGTGKTVTLQRLAEAFSDAGVAVFAA
CCCCCEEEECCCCCCHHHHHHHHHHHCCEEEECCCCCCHHHHHHHHHHHCCCCEEEEEE
DVKGDLCGLGAAGNPQGKIAERIAGMPWLNHKPQAYPVTLWDIHGQSGHPLRTTLSEMGP
CCCCCEEECCCCCCCCHHHHHHHCCCCCCCCCCCEEEEEEEEECCCCCCHHHHHHHHHHH
LLIGALLELTDSQQSALYAAFKVADREGLLLLDLKDLKALLNHLKDNPQLLGEDAALFTT
HHHHHHHHHCCCHHHHHHHHHHCCCCCCEEEEEHHHHHHHHHHCCCCCHHCCCCCEEEEC
GSSQALLRRLATLEQQGAEALFGEPALQLEDILQPTADGRGRIHLLDASRLVHEAPKVYA
CCHHHHHHHHHHHHHHCCHHHHCCCCHHHHHHHCCCCCCCCEEEEECHHHHHHHHHHHHH
TFLLWLLAELFEQLPERGDADKPLLALFFDEAHLLFGDTPKALQERLEQVVRLIRSKGVG
HHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCEEECCCHHHHHHHHHHHHHHHHHCCCE
VYFVTQSPGDLPDDVLAQLGLRIQHGLRAFTAKEQKSLRAVADGFRPNPAFDTLSVLTEL
EEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHH
GIGEALVGTLQEKGTPEMAQRVLVAPPQSRIGPLTETERTMLIAGSPFKGRYDKPIDRES
CCCHHHHHHHHHCCCHHHHHHEECCCCHHHCCCCCCCCCEEEEECCCCCCCCCCCCCHHH
AYEILMGRKGLAPEAEAAPGKPAAEEPSLADRAGEFLGTAAGQALKSAMRQAANSLGKQL
HHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VRGLMGSLLGGSKRR
HHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 7610040; 9278503 [H]