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The map label for this gene is rfbG [H]

Identifier: 76819797

GI number: 76819797

Start: 2400315

End: 2401388

Strand: Direct

Name: rfbG [H]

Synonym: BURPS1710b_A1962

Alternate gene names: 76819797

Gene position: 2400315-2401388 (Clockwise)

Preceding gene: 76819082

Following gene: 76818298

Centisome position: 75.44

GC content: 69.37

Gene sequence:

>1074_bases
ATGCATGCGCCCGACGCTCGATTCTGGCAGGCGAGACGCGTGCTCGTGACGGGCCACACGGGCTTCAAGGGAAGCTGGCT
GAGCCTGTGGCTGCAGTCGCTCGGCGCGCAGGTTCACGGGCTCGCGCTCGAGCCGCCGTCGCGCCCGTCGCTGTTCGAAA
CGGCGCGCGTCGCCCAGCGCATGTCCAGCACGATCGGCGACATACGCGACTACGACGTCGTTCGGCGAACGATCGCCGAT
TGCAGGCCGGAGGTGGTGATCCATCTGGCCGCCCAGCCGCTCGTGCGCGCGTCCTATGCGGATCCGCTGTCGACCTACGG
CACCAACGTGATGGGCACGGCCAATCTGCTGGAGGCGCTGCGCCGCGCCGGCTGCGCGCGGGCGGTCGTCAACGTCACCA
CCGACAAGTGCTACGAGAACCGGGATTGGCTCTGGGGCTATCGCGAGAACGACGCGCTCGGCGGCCACGATCCGTACAGC
AGCAGCAAGGCGTGCTCGGAGCTCGTGAGCAGTGCGTACCGGCGCTCGTTTTTCGCGCAGGGCGCGACGGCGCTTGCCAG
CGCGCGGGCCGGCAACGTCATCGGCGGCGGCGACTGGGCCGCGGAGCGGCTCGTGCCCGACGTGCTGGCCGCTTTCGCGA
GCGGCCGGCCGGCGGTCATTCGCCATCCGCATGCGGTCCGTCCGTGGCAGCACGTGCTGGATTCGCTGTCGGGCTACCTG
CGCCTCGCCGAGCGTCTGCATGCCGATGGGCAGGCATGGGCCGAAGCATGGAATTTCGGCCCCGACGATGCGCAGGCCCG
TACGGTCGAATGGGTGGTGTCGCGAATGGCCCGCATCTGGGGCGGCGATGCGCGATGGCATCCCGATTCGGCCGATCATC
CTCACGAGGCCGCGCAATTGAAGCTCGACAGCTCGAAAGCGAAGGCGAGGCTCGGCTGGCGGCCGCGCTGGAGCCTTGCG
CGCGCGCTCGAATGCACGATCGCGTGGCACCGCGCATGGCTCGCCCGCGAGGACATGCGCGCCGTATGCATCGAACAGAT
CGCGGAATTCGACACTTCGCCCGACCCGACCTAG

Upstream 100 bases:

>100_bases
ACGACGGCTTCTGGCAATGCATGGATACGTTGCGCGACAAGCTGCTGCTCGACAGCATGTGGGCGACGGGCACCGCGCCG
TGGAAGAAATGGAGCTGACG

Downstream 100 bases:

>100_bases
ACGACCCATGGACATCATCCGCCCCACGTTCGCGCCGGACGCCGCGCGAAGCCCGGACGCCATCCGCGCGGAAATCGCCG
CGCTGGTTCGAGAGTATGCG

Product: CDP-glucose 4,6-dehydratase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 357; Mature: 357

Protein sequence:

>357_residues
MHAPDARFWQARRVLVTGHTGFKGSWLSLWLQSLGAQVHGLALEPPSRPSLFETARVAQRMSSTIGDIRDYDVVRRTIAD
CRPEVVIHLAAQPLVRASYADPLSTYGTNVMGTANLLEALRRAGCARAVVNVTTDKCYENRDWLWGYRENDALGGHDPYS
SSKACSELVSSAYRRSFFAQGATALASARAGNVIGGGDWAAERLVPDVLAAFASGRPAVIRHPHAVRPWQHVLDSLSGYL
RLAERLHADGQAWAEAWNFGPDDAQARTVEWVVSRMARIWGGDARWHPDSADHPHEAAQLKLDSSKAKARLGWRPRWSLA
RALECTIAWHRAWLAREDMRAVCIEQIAEFDTSPDPT

Sequences:

>Translated_357_residues
MHAPDARFWQARRVLVTGHTGFKGSWLSLWLQSLGAQVHGLALEPPSRPSLFETARVAQRMSSTIGDIRDYDVVRRTIAD
CRPEVVIHLAAQPLVRASYADPLSTYGTNVMGTANLLEALRRAGCARAVVNVTTDKCYENRDWLWGYRENDALGGHDPYS
SSKACSELVSSAYRRSFFAQGATALASARAGNVIGGGDWAAERLVPDVLAAFASGRPAVIRHPHAVRPWQHVLDSLSGYL
RLAERLHADGQAWAEAWNFGPDDAQARTVEWVVSRMARIWGGDARWHPDSADHPHEAAQLKLDSSKAKARLGWRPRWSLA
RALECTIAWHRAWLAREDMRAVCIEQIAEFDTSPDPT
>Mature_357_residues
MHAPDARFWQARRVLVTGHTGFKGSWLSLWLQSLGAQVHGLALEPPSRPSLFETARVAQRMSSTIGDIRDYDVVRRTIAD
CRPEVVIHLAAQPLVRASYADPLSTYGTNVMGTANLLEALRRAGCARAVVNVTTDKCYENRDWLWGYRENDALGGHDPYS
SSKACSELVSSAYRRSFFAQGATALASARAGNVIGGGDWAAERLVPDVLAAFASGRPAVIRHPHAVRPWQHVLDSLSGYL
RLAERLHADGQAWAEAWNFGPDDAQARTVEWVVSRMARIWGGDARWHPDSADHPHEAAQLKLDSSKAKARLGWRPRWSLA
RALECTIAWHRAWLAREDMRAVCIEQIAEFDTSPDPT

Specific function: DTDP-L-RHAMNOSE BIOSYNTHESIS WITHIN THE O ANTIGEN BIOSYNTHESIS PATHWAY OF LIPOPOLYSACCHARIDE BIOSYNTHESIS. [C]

COG id: COG0451

COG function: function code MG; Nucleoside-diphosphate-sugar epimerases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI48994969, Length=345, Percent_Identity=25.7971014492754, Blast_Score=75, Evalue=9e-15,
Organism=Escherichia coli, GI1788353, Length=345, Percent_Identity=24.9275362318841, Blast_Score=72, Evalue=5e-14,
Organism=Caenorhabditis elegans, GI115532424, Length=335, Percent_Identity=22.9850746268657, Blast_Score=76, Evalue=3e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013445
- InterPro:   IPR001509
- InterPro:   IPR016040 [H]

Pfam domain/function: PF01370 Epimerase [H]

EC number: =4.2.1.45 [H]

Molecular weight: Translated: 39606; Mature: 39606

Theoretical pI: Translated: 8.39; Mature: 8.39

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHAPDARFWQARRVLVTGHTGFKGSWLSLWLQSLGAQVHGLALEPPSRPSLFETARVAQR
CCCCCCHHHHHCEEEEECCCCCCHHHHHHHHHHHCCHHCCEEECCCCCCHHHHHHHHHHH
MSSTIGDIRDYDVVRRTIADCRPEVVIHLAAQPLVRASYADPLSTYGTNVMGTANLLEAL
HHHHHHHHHHHHHHHHHHHHCCHHHEEHHHHHHHHHHHCCCCHHHHCCCCCCHHHHHHHH
RRAGCARAVVNVTTDKCYENRDWLWGYRENDALGGHDPYSSSKACSELVSSAYRRSFFAQ
HHCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHH
GATALASARAGNVIGGGDWAAERLVPDVLAAFASGRPAVIRHPHAVRPWQHVLDSLSGYL
HHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHCCCCCEEECCCCCCHHHHHHHHHHHHH
RLAERLHADGQAWAEAWNFGPDDAQARTVEWVVSRMARIWGGDARWHPDSADHPHEAAQL
HHHHHHCCCHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHE
KLDSSKAKARLGWRPRWSLARALECTIAWHRAWLAREDMRAVCIEQIAEFDTSPDPT
EECCHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
>Mature Secondary Structure
MHAPDARFWQARRVLVTGHTGFKGSWLSLWLQSLGAQVHGLALEPPSRPSLFETARVAQR
CCCCCCHHHHHCEEEEECCCCCCHHHHHHHHHHHCCHHCCEEECCCCCCHHHHHHHHHHH
MSSTIGDIRDYDVVRRTIADCRPEVVIHLAAQPLVRASYADPLSTYGTNVMGTANLLEAL
HHHHHHHHHHHHHHHHHHHHCCHHHEEHHHHHHHHHHHCCCCHHHHCCCCCCHHHHHHHH
RRAGCARAVVNVTTDKCYENRDWLWGYRENDALGGHDPYSSSKACSELVSSAYRRSFFAQ
HHCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHH
GATALASARAGNVIGGGDWAAERLVPDVLAAFASGRPAVIRHPHAVRPWQHVLDSLSGYL
HHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHCCCCCEEECCCCCCHHHHHHHHHHHHH
RLAERLHADGQAWAEAWNFGPDDAQARTVEWVVSRMARIWGGDARWHPDSADHPHEAAQL
HHHHHHCCCHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHE
KLDSSKAKARLGWRPRWSLARALECTIAWHRAWLAREDMRAVCIEQIAEFDTSPDPT
EECCHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 1710759; 11677609 [H]